RNA–Protein interactions for RNA: ENST00000541586.5

CCM2-218, Transcript of CCM2 scaffold protein, humanhuman

TSL 3 BASIC

Gene CCM2, Length 1,719 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-218ENST00000541586 MGME1Q9BQP7 344 aa28.07■■■□□ 2.08
CCM2-218ENST00000541586 FSD1LQ9BXM9 530 aa28.07■■■□□ 2.08
CCM2-218ENST00000541586 COL25A1Q9BXS0 654 aaPredicted RBP28.07■■■□□ 2.08
CCM2-218ENST00000541586 LMAN1LQ9HAT1 526 aa28.07■■■□□ 2.08
CCM2-218ENST00000541586 HAUS2Q9NVX0 235 aa28.07■■■□□ 2.08
CCM2-218ENST00000541586 VPS51Q9UID3 782 aa28.07■■■□□ 2.08
CCM2-218ENST00000541586 AP3B1O00203 1094 aa28.06■■■□□ 2.08
CCM2-218ENST00000541586 GJB3O75712 270 aa28.06■■■□□ 2.08
CCM2-218ENST00000541586 GCAP28676 217 aa28.06■■■□□ 2.08
CCM2-218ENST00000541586 PLK1P53350 603 aa28.06■■■□□ 2.08
CCM2-218ENST00000541586 CYTH1Q15438 398 aa28.06■■■□□ 2.08
CCM2-218ENST00000541586 CERCAMQ5T4B2 595 aa28.06■■■□□ 2.08
CCM2-218ENST00000541586 C2orf49Q9BVC5 232 aaPredicted RBP28.06■■■□□ 2.08
CCM2-218ENST00000541586 PLA2G4CQ9UP65 541 aa28.06■■■□□ 2.08
CCM2-218ENST00000541586 RGS16O15492 202 aaPredicted RBP28.06■■■□□ 2.08
CCM2-218ENST00000541586 ATP5BP06576 529 aaKnown RBP28.06■■■□□ 2.08
CCM2-218ENST00000541586 GSTA2P09210 222 aa28.06■■■□□ 2.08
CCM2-218ENST00000541586 NPY2RP49146 381 aa28.06■■■□□ 2.08
CCM2-218ENST00000541586 CBX1P83916 185 aa28.06■■■□□ 2.08
CCM2-218ENST00000541586 SKOR1P84550 965 aa28.06■■■□□ 2.08
CCM2-218ENST00000541586 CCINQ13939 588 aa28.06■■■□□ 2.08
CCM2-218ENST00000541586 EFTUD2Q15029 972 aaKnown RBP eCLIP28.06■■■□□ 2.08
CCM2-218ENST00000541586 PCSK7Q16549 785 aa28.06■■■□□ 2.08
CCM2-218ENST00000541586 SKIDA1Q1XH10 827 aa28.06■■■□□ 2.08
CCM2-218ENST00000541586 DENND5AQ6IQ26 1287 aa28.06■■■□□ 2.08
CCM2-218ENST00000541586 RANBP10Q6VN20 620 aa28.06■■■□□ 2.08
CCM2-218ENST00000541586 KDELC2Q7Z4H8 507 aa28.06■■■□□ 2.08
CCM2-218ENST00000541586 CCNJLQ8IV13 435 aa28.06■■■□□ 2.08
CCM2-218ENST00000541586 UCMAQ8WVF2 138 aa28.06■■■□□ 2.08
CCM2-218ENST00000541586 NELL2Q99435 816 aa28.06■■■□□ 2.08
CCM2-218ENST00000541586 CTNNAL1Q9UBT7 734 aa28.06■■■□□ 2.08
CCM2-218ENST00000541586 TIMM44O43615 452 aa28.05■■■□□ 2.08
CCM2-218ENST00000541586 TPH1P17752 444 aa28.05■■■□□ 2.08
CCM2-218ENST00000541586 ECT2LQ008S8 904 aa28.05■■■□□ 2.08
CCM2-218ENST00000541586 STEAP4Q687X5 459 aa28.05■■■□□ 2.08
CCM2-218ENST00000541586 TTC17Q96AE7 1141 aa28.05■■■□□ 2.08
CCM2-218ENST00000541586 NAT9Q9BTE0 207 aa28.05■■■□□ 2.08
CCM2-218ENST00000541586 SAMD15Q9P1V8 674 aa28.05■■■□□ 2.08
CCM2-218ENST00000541586 NOVA2Q9UNW9 492 aaKnown RBP28.05■■■□□ 2.08
CCM2-218ENST00000541586 TMEM221A6NGB7 291 aa28.04■■■□□ 2.08
CCM2-218ENST00000541586 POC1B-GALNT4F8VUJ3 575 aa28.04■■■□□ 2.08
CCM2-218ENST00000541586 M0R296 226 aa28.04■■■□□ 2.08
CCM2-218ENST00000541586 TNFRSF10AO00220 468 aa28.04■■■□□ 2.08
CCM2-218ENST00000541586 PIAS1O75925 651 aa28.04■■■□□ 2.08
CCM2-218ENST00000541586 CHRNB1P11230 501 aa28.04■■■□□ 2.08
CCM2-218ENST00000541586 PGAM1P18669 254 aa28.04■■■□□ 2.08
CCM2-218ENST00000541586 STX2P32856 288 aa28.04■■■□□ 2.08
CCM2-218ENST00000541586 EIF4HQ15056 248 aaKnown RBP28.04■■■□□ 2.08
CCM2-218ENST00000541586 KLHL38Q2WGJ6 581 aa28.04■■■□□ 2.08
CCM2-218ENST00000541586 EGFLAMQ63HQ2 1017 aa28.04■■■□□ 2.08
CCM2-218ENST00000541586 ZNF513Q8N8E2 541 aaPredicted RBP28.04■■■□□ 2.08
CCM2-218ENST00000541586 GSDMBQ8TAX9 411 aa28.04■■■□□ 2.08
CCM2-218ENST00000541586 SIT1Q9Y3P8 196 aa28.04■■■□□ 2.08
CCM2-218ENST00000541586 KIAA1549LQ6ZVL6 1849 aa28.04■■■□□ 2.08
CCM2-218ENST00000541586 CDH16O75309 829 aa28.04■■■□□ 2.08
CCM2-218ENST00000541586 TMCC1O94876 653 aa28.04■■■□□ 2.08
CCM2-218ENST00000541586 DLDP09622 509 aaKnown RBP28.04■■■□□ 2.08
CCM2-218ENST00000541586 RGRP47804 291 aa28.04■■■□□ 2.08
CCM2-218ENST00000541586 STK19P49842 368 aaPredicted RBP28.04■■■□□ 2.08
CCM2-218ENST00000541586 GEMIN4P57678 1058 aaKnown RBP28.04■■■□□ 2.08
CCM2-218ENST00000541586 SULT2A1Q06520 285 aa28.04■■■□□ 2.08
CCM2-218ENST00000541586 INO80DQ53TQ3 878 aaPredicted RBP28.04■■■□□ 2.08
CCM2-218ENST00000541586 TLCD1Q96CP7 247 aa28.04■■■□□ 2.08
CCM2-218ENST00000541586 CYTH2Q99418 400 aa28.04■■■□□ 2.08
CCM2-218ENST00000541586 IL22Q9GZX6 179 aa28.04■■■□□ 2.08
CCM2-218ENST00000541586 EPHX3Q9H6B9 360 aa28.04■■■□□ 2.08
CCM2-218ENST00000541586 FETUBQ9UGM5 382 aa28.04■■■□□ 2.08
CCM2-218ENST00000541586 ATP9BO43861 1147 aa28.03■■■□□ 2.08
CCM2-218ENST00000541586 C1QAP02745 245 aa28.03■■■□□ 2.08
CCM2-218ENST00000541586 FBXO43Q4G163 708 aa28.03■■■□□ 2.08
CCM2-218ENST00000541586 TDRPQ86YL5 185 aa28.03■■■□□ 2.08
CCM2-218ENST00000541586 PJA1Q8NG27 643 aa28.03■■■□□ 2.08
CCM2-218ENST00000541586 ACDQ96AP0 544 aa28.03■■■□□ 2.08
CCM2-218ENST00000541586 EXOC2Q96KP1 924 aa28.03■■■□□ 2.08
CCM2-218ENST00000541586 PPCSQ9HAB8 311 aa28.03■■■□□ 2.08
CCM2-218ENST00000541586 EURLQ9NYK6 297 aa28.03■■■□□ 2.08
CCM2-218ENST00000541586 LGALS13Q9UHV8 139 aa28.03■■■□□ 2.08
CCM2-218ENST00000541586 HCN2Q9UL51 889 aa28.03■■■□□ 2.08
CCM2-218ENST00000541586 ERVW-1Q9UQF0 538 aa28.03■■■□□ 2.08
CCM2-218ENST00000541586 STARD13Q9Y3M8 1113 aa28.03■■■□□ 2.08
CCM2-218ENST00000541586 WASH3PC4AMC7 463 aa28.02■■■□□ 2.08
CCM2-218ENST00000541586 TECTAO75443 2155 aa28.02■■■□□ 2.08
CCM2-218ENST00000541586 MT-CO1P00395 513 aa28.02■■■□□ 2.08
CCM2-218ENST00000541586 DCNP07585 359 aaKnown RBP28.02■■■□□ 2.08
CCM2-218ENST00000541586 WASP42768 502 aa28.02■■■□□ 2.08
CCM2-218ENST00000541586 KIR2DL1P43626 348 aaPredicted RBP28.02■■■□□ 2.08
CCM2-218ENST00000541586 CHRNA4P43681 627 aa28.02■■■□□ 2.08
CCM2-218ENST00000541586 GYS2P54840 703 aa28.02■■■□□ 2.08
CCM2-218ENST00000541586 KBTBD12Q3ZCT8 623 aa28.02■■■□□ 2.08
CCM2-218ENST00000541586 TNFAIP8L3Q5GJ75 292 aa28.02■■■□□ 2.08
CCM2-218ENST00000541586 ZNF687Q8N1G0 1237 aa28.02■■■□□ 2.08
CCM2-218ENST00000541586 MRRFQ96E11 262 aaKnown RBP28.02■■■□□ 2.08
CCM2-218ENST00000541586 ACOX2Q99424 681 aa28.02■■■□□ 2.08
CCM2-218ENST00000541586 SLC24A2Q9UI40 661 aa28.02■■■□□ 2.08
CCM2-218ENST00000541586 SLCO3A1Q9UIG8 710 aa28.02■■■□□ 2.08
CCM2-218ENST00000541586 SLC25A13Q9UJS0 675 aa28.02■■■□□ 2.08
CCM2-218ENST00000541586 CR2P20023 1033 aa28.01■■■□□ 2.07
CCM2-218ENST00000541586 PRKCHP24723 683 aa28.01■■■□□ 2.07
CCM2-218ENST00000541586 FZD5Q13467 585 aa28.01■■■□□ 2.07
CCM2-218ENST00000541586 LRRC32Q14392 662 aa28.01■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms