RNA–Protein interactions for RNA: ENST00000540931.1

CLSTN3-210, Transcript of calsyntenin 3, humanhuman

TSL 2

Gene CLSTN3, Length 910 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-210ENST00000540931 C2orf42Q9NWW7 574 aa17.68■□□□□ 0.42
CLSTN3-210ENST00000540931 WSB2Q9NYS7 404 aaPredicted RBP17.68■□□□□ 0.42
CLSTN3-210ENST00000540931 RAB23Q9ULC3 237 aa17.68■□□□□ 0.42
CLSTN3-210ENST00000540931 R3HDM2Q9Y2K5 976 aaKnown RBP17.68■□□□□ 0.42
CLSTN3-210ENST00000540931 MUSKO15146 869 aa17.67■□□□□ 0.42
CLSTN3-210ENST00000540931 LILRB5O75023 590 aa17.67■□□□□ 0.42
CLSTN3-210ENST00000540931 ADRB3P13945 408 aa17.67■□□□□ 0.42
CLSTN3-210ENST00000540931 EPHB1P54762 984 aa17.67■□□□□ 0.42
CLSTN3-210ENST00000540931 MAXP61244 160 aa17.67■□□□□ 0.42
CLSTN3-210ENST00000540931 MAP7D1Q3KQU3 841 aa17.67■□□□□ 0.42
CLSTN3-210ENST00000540931 SYCP2LQ5T4T6 812 aa17.67■□□□□ 0.42
CLSTN3-210ENST00000540931 CCDC137Q6PK04 289 aaKnown RBP17.67■□□□□ 0.42
CLSTN3-210ENST00000540931 SYDE1Q6ZW31 735 aaPredicted RBP17.67■□□□□ 0.42
CLSTN3-210ENST00000540931 LPCAT2Q7L5N7 544 aa17.67■□□□□ 0.42
CLSTN3-210ENST00000540931 TTC7BQ86TV6 843 aa17.67■□□□□ 0.42
CLSTN3-210ENST00000540931 PRELID2Q8N945 189 aa17.67■□□□□ 0.42
CLSTN3-210ENST00000540931 FAM71DQ8N9W8 422 aa17.67■□□□□ 0.42
CLSTN3-210ENST00000540931 MNS1Q8NEH6 495 aa17.67■□□□□ 0.42
CLSTN3-210ENST00000540931 OR2T34Q8NGX1 318 aa17.67■□□□□ 0.42
CLSTN3-210ENST00000540931 ARRDC2Q8TBH0 407 aa17.67■□□□□ 0.42
CLSTN3-210ENST00000540931 IFT43Q96FT9 208 aa17.67■□□□□ 0.42
CLSTN3-210ENST00000540931 FEM1CQ96JP0 617 aa17.67■□□□□ 0.42
CLSTN3-210ENST00000540931 TPSD1Q9BZJ3 242 aa17.67■□□□□ 0.42
CLSTN3-210ENST00000540931 A0A1W2PP55 124 aa17.66■□□□□ 0.42
CLSTN3-210ENST00000540931 UPK3BL1B0FP48 263 aa17.66■□□□□ 0.42
CLSTN3-210ENST00000540931 UPK3BL2E5RIL1 263 aa17.66■□□□□ 0.42
CLSTN3-210ENST00000540931 TRAFD1O14545 582 aaPredicted RBP17.66■□□□□ 0.42
CLSTN3-210ENST00000540931 PLRG1O43660 514 aaKnown RBP17.66■□□□□ 0.42
CLSTN3-210ENST00000540931 CYP2A6P11509 494 aaPredicted RBP17.66■□□□□ 0.42
CLSTN3-210ENST00000540931 COILP38432 576 aaPredicted RBP17.66■□□□□ 0.42
CLSTN3-210ENST00000540931 CD86P42081 329 aa17.66■□□□□ 0.42
CLSTN3-210ENST00000540931 UGP2Q16851 508 aa17.66■□□□□ 0.42
CLSTN3-210ENST00000540931 WHAMMP3Q1A5X7 153 aa17.66■□□□□ 0.42
CLSTN3-210ENST00000540931 KIAA1161Q6NSJ0 714 aa17.66■□□□□ 0.42
CLSTN3-210ENST00000540931 TSSK4Q6SA08 328 aa17.66■□□□□ 0.42
CLSTN3-210ENST00000540931 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP17.66■□□□□ 0.42
CLSTN3-210ENST00000540931 USP45Q70EL2 814 aa17.66■□□□□ 0.42
CLSTN3-210ENST00000540931 CEP68Q76N32 757 aa17.66■□□□□ 0.42
CLSTN3-210ENST00000540931 RABEPKQ7Z6M1 372 aa17.66■□□□□ 0.42
CLSTN3-210ENST00000540931 LINC00523Q86TU6 105 aa17.66■□□□□ 0.42
CLSTN3-210ENST00000540931 CAMK1DQ8IU85 385 aa17.66■□□□□ 0.42
CLSTN3-210ENST00000540931 OR6K2Q8NGY2 324 aa17.66■□□□□ 0.42
CLSTN3-210ENST00000540931 ATG4AQ8WYN0 398 aa17.66■□□□□ 0.42
CLSTN3-210ENST00000540931 SLCO2A1Q92959 643 aa17.66■□□□□ 0.42
CLSTN3-210ENST00000540931 MS4A14Q96JA4 679 aa17.66■□□□□ 0.42
CLSTN3-210ENST00000540931 LOXL4Q96JB6 756 aa17.66■□□□□ 0.42
CLSTN3-210ENST00000540931 ZC3H10Q96K80 434 aaKnown RBP17.66■□□□□ 0.42
CLSTN3-210ENST00000540931 FSD1LQ9BXM9 530 aa17.66■□□□□ 0.42
CLSTN3-210ENST00000540931 TDRD1Q9BXT4 1180 aaKnown RBP17.66■□□□□ 0.42
CLSTN3-210ENST00000540931 NEUROG2Q9H2A3 272 aa17.66■□□□□ 0.42
CLSTN3-210ENST00000540931 PCDH9Q9HC56 1237 aa17.66■□□□□ 0.42
CLSTN3-210ENST00000540931 CDC23Q9UJX2 597 aa17.66■□□□□ 0.42
CLSTN3-210ENST00000540931 SARDHQ9UL12 918 aa17.66■□□□□ 0.42
CLSTN3-210ENST00000540931 CYP8B1Q9UNU6 501 aa17.66■□□□□ 0.42
CLSTN3-210ENST00000540931 PPIL1Q9Y3C6 166 aa17.66■□□□□ 0.42
CLSTN3-210ENST00000540931 RAI2Q9Y5P3 530 aa17.66■□□□□ 0.42
CLSTN3-210ENST00000540931 IGHV1OR15-9A0A0B4J2B8 117 aa17.65■□□□□ 0.42
CLSTN3-210ENST00000540931 NEMP1O14524 444 aa17.65■□□□□ 0.42
CLSTN3-210ENST00000540931 PGLSO95336 258 aa17.65■□□□□ 0.42
CLSTN3-210ENST00000540931 SEMA4FO95754 770 aa17.65■□□□□ 0.42
CLSTN3-210ENST00000540931 CPP00450 1065 aa17.65■□□□□ 0.42
CLSTN3-210ENST00000540931 IFNB1P01574 187 aa17.65■□□□□ 0.42
CLSTN3-210ENST00000540931 NFKB1P19838 968 aa17.65■□□□□ 0.42
CLSTN3-210ENST00000540931 DRD3P35462 400 aa17.65■□□□□ 0.42
CLSTN3-210ENST00000540931 RGRP47804 291 aa17.65■□□□□ 0.42
CLSTN3-210ENST00000540931 GRIA4P48058 902 aa17.65■□□□□ 0.42
CLSTN3-210ENST00000540931 CCR5P51681 352 aa17.65■□□□□ 0.42
CLSTN3-210ENST00000540931 DSC2Q02487 901 aa17.65■□□□□ 0.42
CLSTN3-210ENST00000540931 CDK18Q07002 472 aa17.65■□□□□ 0.42
CLSTN3-210ENST00000540931 CNTN1Q12860 1018 aa17.65■□□□□ 0.42
CLSTN3-210ENST00000540931 SNX1Q13596 522 aa17.65■□□□□ 0.42
CLSTN3-210ENST00000540931 WDR45BQ5MNZ6 344 aa17.65■□□□□ 0.42
CLSTN3-210ENST00000540931 AADATQ8N5Z0 425 aa17.65■□□□□ 0.42
CLSTN3-210ENST00000540931 OR14C36Q8NHC7 312 aa17.65■□□□□ 0.42
CLSTN3-210ENST00000540931 FAM174AQ8TBP5 190 aa17.65■□□□□ 0.42
CLSTN3-210ENST00000540931 TADA1Q96BN2 335 aa17.65■□□□□ 0.42
CLSTN3-210ENST00000540931 TOE1Q96GM8 510 aaKnown RBP17.65■□□□□ 0.42
CLSTN3-210ENST00000540931 CAPZA3Q96KX2 299 aa17.65■□□□□ 0.42
CLSTN3-210ENST00000540931 C1QTNF7Q9BXJ2 289 aa17.65■□□□□ 0.42
CLSTN3-210ENST00000540931 DUSP15Q9H1R2 295 aaPredicted RBP17.65■□□□□ 0.42
CLSTN3-210ENST00000540931 PCYOX1Q9UHG3 505 aa17.65■□□□□ 0.42
CLSTN3-210ENST00000540931 PCDHB9Q9Y5E1 797 aa17.65■□□□□ 0.42
CLSTN3-210ENST00000540931 PLXND1Q9Y4D7 1925 aa17.64■□□□□ 0.42
CLSTN3-210ENST00000540931 OTOGLQ3ZCN5 2332 aa17.64■□□□□ 0.41
CLSTN3-210ENST00000540931 ZNF185O15231 689 aa17.64■□□□□ 0.41
CLSTN3-210ENST00000540931 RNGTTO60942 597 aaKnown RBP17.64■□□□□ 0.41
CLSTN3-210ENST00000540931 URI1O94763 535 aaPredicted RBP17.64■□□□□ 0.41
CLSTN3-210ENST00000540931 ECEL1O95672 775 aa17.64■□□□□ 0.41
CLSTN3-210ENST00000540931 ZNF30P17039 623 aa17.64■□□□□ 0.41
CLSTN3-210ENST00000540931 HLA-DPA1P20036 260 aa17.64■□□□□ 0.41
CLSTN3-210ENST00000540931 HOXD12P35452 270 aa17.64■□□□□ 0.41
CLSTN3-210ENST00000540931 PXNP49023 591 aaPredicted RBP17.64■□□□□ 0.41
CLSTN3-210ENST00000540931 RPS21P63220 83 aaKnown RBP17.64■□□□□ 0.41
CLSTN3-210ENST00000540931 SARNPP82979 210 aaKnown RBP17.64■□□□□ 0.41
CLSTN3-210ENST00000540931 SKOR1P84550 965 aa17.64■□□□□ 0.41
CLSTN3-210ENST00000540931 CDK16Q00536 496 aa17.64■□□□□ 0.41
CLSTN3-210ENST00000540931 RPL6Q02878 288 aaKnown RBP17.64■□□□□ 0.41
CLSTN3-210ENST00000540931 DHX34Q14147 1143 aaKnown RBP17.64■□□□□ 0.41
CLSTN3-210ENST00000540931 PIP5KL1Q5T9C9 394 aa17.64■□□□□ 0.41
CLSTN3-210ENST00000540931 AGBL4Q5VU57 503 aa17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms