RNA–Protein interactions for RNA: ENST00000540805.5

PROM1-220, Transcript of prominin 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PROM1, Length 3,908 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-220ENST00000540805 MOCOSQ96EN8 888 aa5.28□□□□□ -1.56
PROM1-220ENST00000540805 MS4A4AQ96JQ5 239 aa5.28□□□□□ -1.56
PROM1-220ENST00000540805 PPP1R36Q96LQ0 422 aa5.28□□□□□ -1.56
PROM1-220ENST00000540805 ZNF597Q96LX8 424 aa5.28□□□□□ -1.56
PROM1-220ENST00000540805 KLHL32Q96NJ5 620 aa5.28□□□□□ -1.56
PROM1-220ENST00000540805 OR52B2Q96RD2 323 aa5.28□□□□□ -1.56
PROM1-220ENST00000540805 PEBP4Q96S96 227 aa5.28□□□□□ -1.56
PROM1-220ENST00000540805 GAD1Q99259 594 aa5.28□□□□□ -1.56
PROM1-220ENST00000540805 COLEC11Q9BWP8 271 aa5.28□□□□□ -1.56
PROM1-220ENST00000540805 NIFKQ9BYG3 293 aaKnown RBP5.28□□□□□ -1.56
PROM1-220ENST00000540805 TRPV6Q9H1D0 765 aa5.28□□□□□ -1.56
PROM1-220ENST00000540805 MTPAPQ9NVV4 582 aaKnown RBP eCLIP5.28□□□□□ -1.56
PROM1-220ENST00000540805 SNTG2Q9NY99 539 aa5.28□□□□□ -1.56
PROM1-220ENST00000540805 MOCS1Q9NZB8 636 aa5.28□□□□□ -1.56
PROM1-220ENST00000540805 SLC17A6Q9P2U8 582 aa5.28□□□□□ -1.56
PROM1-220ENST00000540805 GPC6Q9Y625 555 aaPredicted RBP5.28□□□□□ -1.56
PROM1-220ENST00000540805 FAM186AA6NE01 2351 aa5.28□□□□□ -1.56
PROM1-220ENST00000540805 ZDBF2Q9HCK1 2354 aa5.28□□□□□ -1.56
PROM1-220ENST00000540805 C7orf72A4D263 438 aa5.27□□□□□ -1.57
PROM1-220ENST00000540805 TMEM114B3SHH9 223 aa5.27□□□□□ -1.57
PROM1-220ENST00000540805 NT5C1B-RDH14C9J2C7 533 aa5.27□□□□□ -1.57
PROM1-220ENST00000540805 TRIM38O00635 465 aa5.27□□□□□ -1.57
PROM1-220ENST00000540805 ATE1O95260 518 aa5.27□□□□□ -1.57
PROM1-220ENST00000540805 BMP10O95393 424 aa5.27□□□□□ -1.57
PROM1-220ENST00000540805 CST3P01034 146 aaPredicted RBP5.27□□□□□ -1.57
PROM1-220ENST00000540805 CD4P01730 458 aa5.27□□□□□ -1.57
PROM1-220ENST00000540805 ERBB2P04626 1255 aa5.27□□□□□ -1.57
PROM1-220ENST00000540805 THP07101 528 aa5.27□□□□□ -1.57
PROM1-220ENST00000540805 CXCL8P10145 99 aa5.27□□□□□ -1.57
PROM1-220ENST00000540805 MCF2P10911 925 aa5.27□□□□□ -1.57
PROM1-220ENST00000540805 AKR1A1P14550 325 aa5.27□□□□□ -1.57
PROM1-220ENST00000540805 ZNF26P17031 533 aaPredicted RBP5.27□□□□□ -1.57
PROM1-220ENST00000540805 PTPN1P18031 435 aaKnown RBP5.27□□□□□ -1.57
PROM1-220ENST00000540805 UBA1P22314 1058 aaKnown RBP5.27□□□□□ -1.57
PROM1-220ENST00000540805 PROZP22891 400 aa5.27□□□□□ -1.57
PROM1-220ENST00000540805 NIPAL4Q0D2K0 466 aa5.27□□□□□ -1.57
PROM1-220ENST00000540805 EFEMP1Q12805 493 aa5.27□□□□□ -1.57
PROM1-220ENST00000540805 ITGADQ13349 1161 aa5.27□□□□□ -1.57
PROM1-220ENST00000540805 CDH18Q13634 790 aa5.27□□□□□ -1.57
PROM1-220ENST00000540805 FSCN1Q16658 493 aaKnown RBP5.27□□□□□ -1.57
PROM1-220ENST00000540805 FGD3Q5JSP0 725 aa5.27□□□□□ -1.57
PROM1-220ENST00000540805 FAM171A1Q5VUB5 890 aa5.27□□□□□ -1.57
PROM1-220ENST00000540805 KCNT2Q6UVM3 1135 aa5.27□□□□□ -1.57
PROM1-220ENST00000540805 RD3Q7Z3Z2 195 aa5.27□□□□□ -1.57
PROM1-220ENST00000540805 PLD5Q8N7P1 536 aa5.27□□□□□ -1.57
PROM1-220ENST00000540805 MAPK15Q8TD08 544 aa5.27□□□□□ -1.57
PROM1-220ENST00000540805 ISOC1Q96CN7 298 aa5.27□□□□□ -1.57
PROM1-220ENST00000540805 THAP11Q96EK4 314 aa5.27□□□□□ -1.57
PROM1-220ENST00000540805 CNDP1Q96KN2 507 aa5.27□□□□□ -1.57
PROM1-220ENST00000540805 RANBP9Q96S59 729 aa5.27□□□□□ -1.57
PROM1-220ENST00000540805 CPXM1Q96SM3 734 aa5.27□□□□□ -1.57
PROM1-220ENST00000540805 ADAM2Q99965 735 aa5.27□□□□□ -1.57
PROM1-220ENST00000540805 SEMA6AQ9H2E6 1030 aa5.27□□□□□ -1.57
PROM1-220ENST00000540805 COQ10BQ9H8M1 238 aa5.27□□□□□ -1.57
PROM1-220ENST00000540805 CLK4Q9HAZ1 481 aaKnown RBP5.27□□□□□ -1.57
PROM1-220ENST00000540805 HPS4Q9NQG7 708 aa5.27□□□□□ -1.57
PROM1-220ENST00000540805 GTSE1Q9NYZ3 720 aa5.27□□□□□ -1.57
PROM1-220ENST00000540805 CYTH4Q9UIA0 394 aa5.27□□□□□ -1.57
PROM1-220ENST00000540805 GIT1Q9Y2X7 761 aa5.27□□□□□ -1.57
PROM1-220ENST00000540805 TMED5Q9Y3A6 229 aa5.27□□□□□ -1.57
PROM1-220ENST00000540805 FADS3Q9Y5Q0 445 aa5.27□□□□□ -1.57
PROM1-220ENST00000540805 A0A087WXM4 84 aa5.27□□□□□ -1.57
PROM1-220ENST00000540805 A0A1W2PPW3 197 aa5.27□□□□□ -1.57
PROM1-220ENST00000540805 WDR27A2RRH5 827 aa5.27□□□□□ -1.57
PROM1-220ENST00000540805 H0Y626 953 aa5.27□□□□□ -1.57
PROM1-220ENST00000540805 SLC22A2O15244 555 aa5.27□□□□□ -1.57
PROM1-220ENST00000540805 SNX2O60749 519 aa5.27□□□□□ -1.57
PROM1-220ENST00000540805 KCNH1O95259 989 aa5.27□□□□□ -1.57
PROM1-220ENST00000540805 VAPBO95292 243 aa5.27□□□□□ -1.57
PROM1-220ENST00000540805 PIGRP01833 764 aa5.27□□□□□ -1.57
PROM1-220ENST00000540805 IGHA2P01877 340 aa5.27□□□□□ -1.57
PROM1-220ENST00000540805 HMGCRP04035 888 aa5.27□□□□□ -1.57
PROM1-220ENST00000540805 MBL2P11226 248 aaPredicted RBP5.27□□□□□ -1.57
PROM1-220ENST00000540805 PRKAR2AP13861 404 aaKnown RBP5.27□□□□□ -1.57
PROM1-220ENST00000540805 ZNF12P17014 697 aa5.27□□□□□ -1.57
PROM1-220ENST00000540805 TCN1P20061 433 aaPredicted RBP5.27□□□□□ -1.57
PROM1-220ENST00000540805 GPD1P21695 349 aa5.27□□□□□ -1.57
PROM1-220ENST00000540805 ARL4DP49703 201 aa5.27□□□□□ -1.57
PROM1-220ENST00000540805 FBXW4P57775 412 aa5.27□□□□□ -1.57
PROM1-220ENST00000540805 CDC42EP1Q00587 391 aa5.27□□□□□ -1.57
PROM1-220ENST00000540805 IKBKEQ14164 716 aa5.27□□□□□ -1.57
PROM1-220ENST00000540805 HERC3Q15034 1050 aa5.27□□□□□ -1.57
PROM1-220ENST00000540805 BCL2A1Q16548 175 aa5.27□□□□□ -1.57
PROM1-220ENST00000540805 CLPPQ16740 277 aaPredicted RBP5.27□□□□□ -1.57
PROM1-220ENST00000540805 PGS1Q32NB8 556 aa5.27□□□□□ -1.57
PROM1-220ENST00000540805 TIGD2Q4W5G0 525 aa5.27□□□□□ -1.57
PROM1-220ENST00000540805 IL23RQ5VWK5 629 aa5.27□□□□□ -1.57
PROM1-220ENST00000540805 FAM219BQ5XKK7 198 aa5.27□□□□□ -1.57
PROM1-220ENST00000540805 STEAP4Q687X5 459 aa5.27□□□□□ -1.57
PROM1-220ENST00000540805 FAAH2Q6GMR7 532 aa5.27□□□□□ -1.57
PROM1-220ENST00000540805 NEPROQ6NW34 567 aa5.27□□□□□ -1.57
PROM1-220ENST00000540805 CYS1Q717R9 158 aa5.27□□□□□ -1.57
PROM1-220ENST00000540805 DSG4Q86SJ6 1040 aa5.27□□□□□ -1.57
PROM1-220ENST00000540805 GPR180Q86V85 440 aa5.27□□□□□ -1.57
PROM1-220ENST00000540805 FAM131BQ86XD5 332 aa5.27□□□□□ -1.57
PROM1-220ENST00000540805 WDR49Q8IV35 697 aa5.27□□□□□ -1.57
PROM1-220ENST00000540805 BRSK2Q8IWQ3 736 aa5.27□□□□□ -1.57
PROM1-220ENST00000540805 UNC5BQ8IZJ1 945 aa5.27□□□□□ -1.57
PROM1-220ENST00000540805 FIBCD1Q8N539 461 aa5.27□□□□□ -1.57
PROM1-220ENST00000540805 FAM156AQ8NDB6 213 aa5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms