RNA–Protein interactions for RNA: ENST00000540683.1

CDCA3-208, Transcript of cell division cycle associated 3, humanhuman

TSL 2 BASIC

Gene CDCA3, Length 985 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-208ENST00000540683 AQP9O43315 295 aa10.49□□□□□ -0.73
CDCA3-208ENST00000540683 LZTS3O60299 673 aaPredicted RBP10.49□□□□□ -0.73
CDCA3-208ENST00000540683 LRCH4O75427 683 aa10.49□□□□□ -0.73
CDCA3-208ENST00000540683 PIAS2O75928 621 aa10.49□□□□□ -0.73
CDCA3-208ENST00000540683 KRT7P08729 469 aa10.49□□□□□ -0.73
CDCA3-208ENST00000540683 CKMT1AP12532 417 aa10.49□□□□□ -0.73
CDCA3-208ENST00000540683 ERCC2P18074 760 aa10.49□□□□□ -0.73
CDCA3-208ENST00000540683 PAPOLAP51003 745 aaKnown RBP10.49□□□□□ -0.73
CDCA3-208ENST00000540683 CDH6P55285 790 aa10.49□□□□□ -0.73
CDCA3-208ENST00000540683 KRT81Q14533 505 aa10.49□□□□□ -0.73
CDCA3-208ENST00000540683 AGERQ15109 404 aa10.49□□□□□ -0.73
CDCA3-208ENST00000540683 PROX2Q3B8N5 592 aa10.49□□□□□ -0.73
CDCA3-208ENST00000540683 CCDC122Q5T0U0 273 aa10.49□□□□□ -0.73
CDCA3-208ENST00000540683 ARTNQ5T4W7 220 aa10.49□□□□□ -0.73
CDCA3-208ENST00000540683 ATXN7L2Q5T6C5 722 aaPredicted RBP10.49□□□□□ -0.73
CDCA3-208ENST00000540683 TIGD7Q6NT04 549 aaPredicted RBP10.49□□□□□ -0.73
CDCA3-208ENST00000540683 ESRP1Q6NXG1 681 aaKnown RBP10.49□□□□□ -0.73
CDCA3-208ENST00000540683 ALKBH5Q6P6C2 394 aaKnown RBP10.49□□□□□ -0.73
CDCA3-208ENST00000540683 DHRS13Q6UX07 377 aa10.49□□□□□ -0.73
CDCA3-208ENST00000540683 MACC1Q6ZN28 852 aa10.49□□□□□ -0.73
CDCA3-208ENST00000540683 GCNT7Q6ZNI0 430 aa10.49□□□□□ -0.73
CDCA3-208ENST00000540683 SRLQ86TD4 932 aa10.49□□□□□ -0.73
CDCA3-208ENST00000540683 LUZP1Q86V48 1076 aa10.49□□□□□ -0.73
CDCA3-208ENST00000540683 LSMEM2Q8N112 164 aa10.49□□□□□ -0.73
CDCA3-208ENST00000540683 ATPAF2Q8N5M1 289 aa10.49□□□□□ -0.73
CDCA3-208ENST00000540683 OR6K2Q8NGY2 324 aa10.49□□□□□ -0.73
CDCA3-208ENST00000540683 RFFLQ8WZ73 363 aa10.49□□□□□ -0.73
CDCA3-208ENST00000540683 TSC1Q92574 1164 aa10.49□□□□□ -0.73
CDCA3-208ENST00000540683 KLK6Q92876 244 aa10.49□□□□□ -0.73
CDCA3-208ENST00000540683 PSKH2Q96QS6 385 aa10.49□□□□□ -0.73
CDCA3-208ENST00000540683 MYOCQ99972 504 aa10.49□□□□□ -0.73
CDCA3-208ENST00000540683 NOL6Q9H6R4 1146 aaKnown RBP10.49□□□□□ -0.73
CDCA3-208ENST00000540683 GPR27Q9NS67 375 aa10.49□□□□□ -0.73
CDCA3-208ENST00000540683 AMACRQ9UHK6 382 aa10.49□□□□□ -0.73
CDCA3-208ENST00000540683 SALL4Q9UJQ4 1053 aa10.49□□□□□ -0.73
CDCA3-208ENST00000540683 ANAPC7Q9UJX3 599 aa10.49□□□□□ -0.73
CDCA3-208ENST00000540683 DOLKQ9UPQ8 538 aa10.49□□□□□ -0.73
CDCA3-208ENST00000540683 ATP8A1Q9Y2Q0 1164 aa10.49□□□□□ -0.73
CDCA3-208ENST00000540683 ANKRD11Q6UB99 2663 aaPredicted RBP10.49□□□□□ -0.73
CDCA3-208ENST00000540683 FRYQ5TBA9 3013 aa10.48□□□□□ -0.73
CDCA3-208ENST00000540683 KNTC1P50748 2209 aa10.48□□□□□ -0.73
CDCA3-208ENST00000540683 SRRM3A6NNA2 597 aaPredicted RBP10.48□□□□□ -0.73
CDCA3-208ENST00000540683 TMX2-CTNND1H3BSU7 103 aa10.48□□□□□ -0.73
CDCA3-208ENST00000540683 WNT9AO14904 365 aa10.48□□□□□ -0.73
CDCA3-208ENST00000540683 RRP8O43159 456 aaKnown RBP10.48□□□□□ -0.73
CDCA3-208ENST00000540683 SOCS5O75159 536 aa10.48□□□□□ -0.73
CDCA3-208ENST00000540683 TOP3BO95985 862 aaKnown RBP10.48□□□□□ -0.73
CDCA3-208ENST00000540683 PYGLP06737 847 aa10.48□□□□□ -0.73
CDCA3-208ENST00000540683 ANXA6P08133 673 aa10.48□□□□□ -0.73
CDCA3-208ENST00000540683 H2AFZP0C0S5 128 aa10.48□□□□□ -0.73
CDCA3-208ENST00000540683 CYP2A6P11509 494 aaPredicted RBP10.48□□□□□ -0.73
CDCA3-208ENST00000540683 SKILP12757 684 aa10.48□□□□□ -0.73
CDCA3-208ENST00000540683 CTSEP14091 401 aa10.48□□□□□ -0.73
CDCA3-208ENST00000540683 JUNDP17535 347 aa10.48□□□□□ -0.73
CDCA3-208ENST00000540683 MX2P20592 715 aa10.48□□□□□ -0.73
CDCA3-208ENST00000540683 SSR1P43307 286 aaKnown RBP10.48□□□□□ -0.73
CDCA3-208ENST00000540683 PFN3P60673 137 aa10.48□□□□□ -0.73
CDCA3-208ENST00000540683 FOXK1P85037 733 aa10.48□□□□□ -0.73
CDCA3-208ENST00000540683 OGDHQ02218 1023 aa10.48□□□□□ -0.73
CDCA3-208ENST00000540683 PPARDQ03181 441 aa10.48□□□□□ -0.73
CDCA3-208ENST00000540683 BNIP3Q12983 259 aa10.48□□□□□ -0.73
CDCA3-208ENST00000540683 MTM1Q13496 603 aa10.48□□□□□ -0.73
CDCA3-208ENST00000540683 LBRQ14739 615 aaKnown RBP10.48□□□□□ -0.73
CDCA3-208ENST00000540683 PDK2Q15119 407 aa10.48□□□□□ -0.73
CDCA3-208ENST00000540683 SHBQ15464 509 aa10.48□□□□□ -0.73
CDCA3-208ENST00000540683 RAB6CQ53S08 254 aa10.48□□□□□ -0.73
CDCA3-208ENST00000540683 ODF2Q5BJF6 829 aa10.48□□□□□ -0.73
CDCA3-208ENST00000540683 PRAMEF14Q5SWL7 426 aa10.48□□□□□ -0.73
CDCA3-208ENST00000540683 AFMIDQ63HM1 303 aa10.48□□□□□ -0.73
CDCA3-208ENST00000540683 SPECC1LQ69YQ0 1117 aa10.48□□□□□ -0.73
CDCA3-208ENST00000540683 H2AFVQ71UI9 128 aa10.48□□□□□ -0.73
CDCA3-208ENST00000540683 KANSL1Q7Z3B3 1105 aa10.48□□□□□ -0.73
CDCA3-208ENST00000540683 OR8K1Q8NGG5 319 aa10.48□□□□□ -0.73
CDCA3-208ENST00000540683 CENPTQ96BT3 561 aa10.48□□□□□ -0.73
CDCA3-208ENST00000540683 BMFQ96LC9 184 aa10.48□□□□□ -0.73
CDCA3-208ENST00000540683 ZNF830Q96NB3 372 aaPredicted RBP10.48□□□□□ -0.73
CDCA3-208ENST00000540683 DEPDC7Q96QD5 511 aa10.48□□□□□ -0.73
CDCA3-208ENST00000540683 NUP85Q9BW27 656 aa10.48□□□□□ -0.73
CDCA3-208ENST00000540683 SLC39A8Q9C0K1 460 aa10.48□□□□□ -0.73
CDCA3-208ENST00000540683 RAB6CQ9H0N0 254 aa10.48□□□□□ -0.73
CDCA3-208ENST00000540683 PDFQ9HBH1 243 aa10.48□□□□□ -0.73
CDCA3-208ENST00000540683 LUC7LQ9NQ29 371 aaKnown RBP10.48□□□□□ -0.73
CDCA3-208ENST00000540683 SCUBE2Q9NQ36 999 aa10.48□□□□□ -0.73
CDCA3-208ENST00000540683 STAU2Q9NUL3 570 aaKnown RBP eCLIP10.48□□□□□ -0.73
CDCA3-208ENST00000540683 APOBEC3BQ9UH17 382 aaKnown RBP10.48□□□□□ -0.73
CDCA3-208ENST00000540683 CLCA2Q9UQC9 943 aa10.48□□□□□ -0.73
CDCA3-208ENST00000540683 IGF2RP11717 2491 aa10.48□□□□□ -0.73
CDCA3-208ENST00000540683 PTPRBP23467 1997 aa10.48□□□□□ -0.73
CDCA3-208ENST00000540683 SSU72P8A0A1W2PR75 194 aa10.47□□□□□ -0.73
CDCA3-208ENST00000540683 POM121BA6NF01 834 aa10.47□□□□□ -0.73
CDCA3-208ENST00000540683 TRABD2BA6NFA1 517 aa10.47□□□□□ -0.73
CDCA3-208ENST00000540683 CACNB4O00305 520 aaPredicted RBP10.47□□□□□ -0.73
CDCA3-208ENST00000540683 ATMINO43313 823 aaPredicted RBP10.47□□□□□ -0.73
CDCA3-208ENST00000540683 SIGLEC6O43699 453 aa10.47□□□□□ -0.73
CDCA3-208ENST00000540683 SDC3O75056 442 aa10.47□□□□□ -0.73
CDCA3-208ENST00000540683 RASGRP1O95267 797 aa10.47□□□□□ -0.73
CDCA3-208ENST00000540683 CYP1A2P05177 515 aa10.47□□□□□ -0.73
CDCA3-208ENST00000540683 ELFN1P0C7U0 828 aa10.47□□□□□ -0.73
CDCA3-208ENST00000540683 TIMP2P16035 220 aa10.47□□□□□ -0.73
CDCA3-208ENST00000540683 HNRNPH3P31942 346 aaKnown RBP10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms