RNA–Protein interactions for RNA: ENST00000540010.1

TRAF1-202, Transcript of TNF receptor associated factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF1, Length 4,303 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-202ENST00000540010 NPY6RQ99463 290 aa10.06□□□□□ -0.8
TRAF1-202ENST00000540010 TKTL2Q9H0I9 626 aa10.06□□□□□ -0.8
TRAF1-202ENST00000540010 ARHGEF4Q9NR80 690 aa10.06□□□□□ -0.8
TRAF1-202ENST00000540010 NKX1-2Q9UD57 310 aaPredicted RBP10.06□□□□□ -0.8
TRAF1-202ENST00000540010 GON4LQ3T8J9 2241 aa10.06□□□□□ -0.8
TRAF1-202ENST00000540010 HNRNPRO43390 633 aaKnown RBP10.06□□□□□ -0.8
TRAF1-202ENST00000540010 TBX10O75333 385 aa10.06□□□□□ -0.8
TRAF1-202ENST00000540010 ZNF682O95780 498 aa10.06□□□□□ -0.8
TRAF1-202ENST00000540010 GLP2RO95838 553 aa10.06□□□□□ -0.8
TRAF1-202ENST00000540010 LYNP07948 512 aa10.06□□□□□ -0.8
TRAF1-202ENST00000540010 ITGB6P18564 788 aa10.06□□□□□ -0.8
TRAF1-202ENST00000540010 RGS4P49798 205 aa10.06□□□□□ -0.8
TRAF1-202ENST00000540010 CDH13P55290 713 aa10.06□□□□□ -0.8
TRAF1-202ENST00000540010 DCTN2Q13561 401 aaKnown RBP10.06□□□□□ -0.8
TRAF1-202ENST00000540010 UTS2BQ765I0 119 aa10.06□□□□□ -0.8
TRAF1-202ENST00000540010 ZNF280BQ86YH2 543 aa10.06□□□□□ -0.8
TRAF1-202ENST00000540010 KBTBD2Q8IY47 623 aa10.06□□□□□ -0.8
TRAF1-202ENST00000540010 TSPAN14Q8NG11 270 aa10.06□□□□□ -0.8
TRAF1-202ENST00000540010 DNAJB14Q8TBM8 379 aa10.06□□□□□ -0.8
TRAF1-202ENST00000540010 FIG4Q92562 907 aa10.06□□□□□ -0.8
TRAF1-202ENST00000540010 CENPIQ92674 756 aaPredicted RBP10.06□□□□□ -0.8
TRAF1-202ENST00000540010 DGCR6LQ9BY27 220 aa10.06□□□□□ -0.8
TRAF1-202ENST00000540010 ZNF395Q9H8N7 513 aaPredicted RBP10.06□□□□□ -0.8
TRAF1-202ENST00000540010 SNX15Q9NRS6 342 aa10.06□□□□□ -0.8
TRAF1-202ENST00000540010 RRN3Q9NYV6 651 aa10.06□□□□□ -0.8
TRAF1-202ENST00000540010 WWOXQ9NZC7 414 aa10.06□□□□□ -0.8
TRAF1-202ENST00000540010 DTLQ9NZJ0 730 aa10.06□□□□□ -0.8
TRAF1-202ENST00000540010 EGFL7Q9UHF1 273 aa10.06□□□□□ -0.8
TRAF1-202ENST00000540010 RABGEF1Q9UJ41 708 aa10.06□□□□□ -0.8
TRAF1-202ENST00000540010 SORCS3Q9UPU3 1222 aa10.06□□□□□ -0.8
TRAF1-202ENST00000540010 MFHAS1Q9Y4C4 1052 aa10.06□□□□□ -0.8
TRAF1-202ENST00000540010 NCAM2O15394 837 aa10.06□□□□□ -0.8
TRAF1-202ENST00000540010 MFSD11O43934 449 aa10.06□□□□□ -0.8
TRAF1-202ENST00000540010 GUCA1CO95843 209 aa10.06□□□□□ -0.8
TRAF1-202ENST00000540010 EOMESO95936 686 aa10.06□□□□□ -0.8
TRAF1-202ENST00000540010 BCL10O95999 233 aa10.06□□□□□ -0.8
TRAF1-202ENST00000540010 NFKB1P19838 968 aa10.06□□□□□ -0.8
TRAF1-202ENST00000540010 RAD51Q06609 339 aa10.06□□□□□ -0.8
TRAF1-202ENST00000540010 DSC3Q14574 896 aa10.06□□□□□ -0.8
TRAF1-202ENST00000540010 CTXN3Q4LDR2 81 aa10.06□□□□□ -0.8
TRAF1-202ENST00000540010 RALGPS1Q5JS13 557 aa10.06□□□□□ -0.8
TRAF1-202ENST00000540010 FAM171A1Q5VUB5 890 aa10.06□□□□□ -0.8
TRAF1-202ENST00000540010 ADGRD1Q6QNK2 874 aa10.06□□□□□ -0.8
TRAF1-202ENST00000540010 SCIMPQ6UWF3 145 aa10.06□□□□□ -0.8
TRAF1-202ENST00000540010 PACS1Q6VY07 963 aa10.06□□□□□ -0.8
TRAF1-202ENST00000540010 RRM2BQ7LG56 351 aa10.06□□□□□ -0.8
TRAF1-202ENST00000540010 PSTKQ8IV42 348 aaKnown RBP10.06□□□□□ -0.8
TRAF1-202ENST00000540010 DHRSXQ8N5I4 330 aa10.06□□□□□ -0.8
TRAF1-202ENST00000540010 KCTD14Q9BQ13 255 aaPredicted RBP10.06□□□□□ -0.8
TRAF1-202ENST00000540010 BBS2Q9BXC9 721 aa10.06□□□□□ -0.8
TRAF1-202ENST00000540010 ALG9Q9H6U8 611 aa10.06□□□□□ -0.8
TRAF1-202ENST00000540010 RGS18Q9NS28 235 aa10.06□□□□□ -0.8
TRAF1-202ENST00000540010 XPR1Q9UBH6 696 aa10.06□□□□□ -0.8
TRAF1-202ENST00000540010 OR12D3Q9UGF7 316 aa10.06□□□□□ -0.8
TRAF1-202ENST00000540010 FARP1Q9Y4F1 1045 aaPredicted RBP10.06□□□□□ -0.8
TRAF1-202ENST00000540010 ARVCFO00192 962 aa10.06□□□□□ -0.8
TRAF1-202ENST00000540010 TM7SF2O76062 418 aa10.06□□□□□ -0.8
TRAF1-202ENST00000540010 DLGAP3O95886 979 aa10.06□□□□□ -0.8
TRAF1-202ENST00000540010 C2P06681 752 aa10.06□□□□□ -0.8
TRAF1-202ENST00000540010 CCDC166P0CW27 439 aa10.06□□□□□ -0.8
TRAF1-202ENST00000540010 SELPP16109 830 aa10.06□□□□□ -0.8
TRAF1-202ENST00000540010 IL5RAQ01344 420 aa10.06□□□□□ -0.8
TRAF1-202ENST00000540010 WASHC5Q12768 1159 aa10.06□□□□□ -0.8
TRAF1-202ENST00000540010 MSS51Q4VC12 460 aa10.06□□□□□ -0.8
TRAF1-202ENST00000540010 ZC3H12BQ5HYM0 836 aaKnown RBP10.06□□□□□ -0.8
TRAF1-202ENST00000540010 CCSAPQ6IQ19 270 aaPredicted RBP10.06□□□□□ -0.8
TRAF1-202ENST00000540010 TRMT10BQ6PF06 316 aaKnown RBP10.06□□□□□ -0.8
TRAF1-202ENST00000540010 FNDC5Q8NAU1 212 aa10.06□□□□□ -0.8
TRAF1-202ENST00000540010 SCAMP5Q8TAC9 235 aa10.06□□□□□ -0.8
TRAF1-202ENST00000540010 PXYLP1Q8TE99 480 aa10.06□□□□□ -0.8
TRAF1-202ENST00000540010 SEPT8Q92599 483 aa10.06□□□□□ -0.8
TRAF1-202ENST00000540010 SERAC1Q96JX3 654 aa10.06□□□□□ -0.8
TRAF1-202ENST00000540010 ZFRQ96KR1 1074 aaKnown RBP10.06□□□□□ -0.8
TRAF1-202ENST00000540010 SUSD3Q96L08 255 aa10.06□□□□□ -0.8
TRAF1-202ENST00000540010 ACOX2Q99424 681 aa10.06□□□□□ -0.8
TRAF1-202ENST00000540010 NPAS2Q99743 824 aa10.06□□□□□ -0.8
TRAF1-202ENST00000540010 FTHL17Q9BXU8 183 aa10.06□□□□□ -0.8
TRAF1-202ENST00000540010 SYBUQ9NX95 663 aa10.06□□□□□ -0.8
TRAF1-202ENST00000540010 VTI1BQ9UEU0 232 aa10.06□□□□□ -0.8
TRAF1-202ENST00000540010 WDR47O94967 919 aa10.05□□□□□ -0.8
TRAF1-202ENST00000540010 LDLRP01130 860 aa10.05□□□□□ -0.8
TRAF1-202ENST00000540010 ERCC2P18074 760 aa10.05□□□□□ -0.8
TRAF1-202ENST00000540010 PAX3P23760 479 aa10.05□□□□□ -0.8
TRAF1-202ENST00000540010 TUBP50607 506 aa10.05□□□□□ -0.8
TRAF1-202ENST00000540010 PSME3P61289 254 aa10.05□□□□□ -0.8
TRAF1-202ENST00000540010 VAC14Q08AM6 782 aa10.05□□□□□ -0.8
TRAF1-202ENST00000540010 SAMD4BQ5PRF9 694 aaKnown RBP10.05□□□□□ -0.8
TRAF1-202ENST00000540010 SDHAF4Q5VUM1 108 aa10.05□□□□□ -0.8
TRAF1-202ENST00000540010 CCDC103Q8IW40 242 aa10.05□□□□□ -0.8
TRAF1-202ENST00000540010 SLC44A2Q8IWA5 706 aaPredicted RBP10.05□□□□□ -0.8
TRAF1-202ENST00000540010 FAM126BQ8IXS8 530 aa10.05□□□□□ -0.8
TRAF1-202ENST00000540010 SNX31Q8N9S9 440 aa10.05□□□□□ -0.8
TRAF1-202ENST00000540010 DBF4BQ8NFT6 615 aa10.05□□□□□ -0.8
TRAF1-202ENST00000540010 RBBP8Q99708 897 aa10.05□□□□□ -0.8
TRAF1-202ENST00000540010 TSEN34Q9BSV6 310 aaKnown RBP10.05□□□□□ -0.8
TRAF1-202ENST00000540010 TBCDQ9BTW9 1192 aa10.05□□□□□ -0.8
TRAF1-202ENST00000540010 SLC25A23Q9BV35 468 aa10.05□□□□□ -0.8
TRAF1-202ENST00000540010 COLEC11Q9BWP8 271 aa10.05□□□□□ -0.8
TRAF1-202ENST00000540010 HBS1LQ9Y450 684 aaKnown RBP10.05□□□□□ -0.8
TRAF1-202ENST00000540010 PCDHA11Q9Y5I1 949 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms