RNA–Protein interactions for RNA: ENST00000539975.5

SNHG1-212, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5 BASIC

Gene SNHG1, Length 955 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-212ENST00000539975 CEP104O60308 925 aa6.56□□□□□ -1.36
SNHG1-212ENST00000539975 ADAM23O75077 832 aa6.56□□□□□ -1.36
SNHG1-212ENST00000539975 RNASEH2AO75792 299 aaKnown RBP6.56□□□□□ -1.36
SNHG1-212ENST00000539975 RPP40O75818 363 aaKnown RBP6.56□□□□□ -1.36
SNHG1-212ENST00000539975 TMCC1O94876 653 aa6.56□□□□□ -1.36
SNHG1-212ENST00000539975 GSRP00390 522 aa6.56□□□□□ -1.36
SNHG1-212ENST00000539975 MT-CO1P00395 513 aa6.56□□□□□ -1.36
SNHG1-212ENST00000539975 APOC2P02655 101 aa6.56□□□□□ -1.36
SNHG1-212ENST00000539975 GOLGA6DP0CG33 693 aa6.56□□□□□ -1.36
SNHG1-212ENST00000539975 SP9P0CG40 484 aa6.56□□□□□ -1.36
SNHG1-212ENST00000539975 PYGMP11217 842 aa6.56□□□□□ -1.36
SNHG1-212ENST00000539975 CCNB1P14635 433 aa6.56□□□□□ -1.36
SNHG1-212ENST00000539975 GLDCP23378 1020 aa6.56□□□□□ -1.36
SNHG1-212ENST00000539975 SERPINA4P29622 427 aa6.56□□□□□ -1.36
SNHG1-212ENST00000539975 CHRNA3P32297 505 aa6.56□□□□□ -1.36
SNHG1-212ENST00000539975 SLC8A1P32418 973 aa6.56□□□□□ -1.36
SNHG1-212ENST00000539975 PTPN7P35236 360 aa6.56□□□□□ -1.36
SNHG1-212ENST00000539975 PSMD8P48556 350 aa6.56□□□□□ -1.36
SNHG1-212ENST00000539975 PXNP49023 591 aaPredicted RBP6.56□□□□□ -1.36
SNHG1-212ENST00000539975 FNTBP49356 437 aa6.56□□□□□ -1.36
SNHG1-212ENST00000539975 PEX5P50542 639 aa6.56□□□□□ -1.36
SNHG1-212ENST00000539975 SCNN1BP51168 640 aa6.56□□□□□ -1.36
SNHG1-212ENST00000539975 ARSEP51690 589 aa6.56□□□□□ -1.36
SNHG1-212ENST00000539975 ARF5P84085 180 aa6.56□□□□□ -1.36
SNHG1-212ENST00000539975 BCL2L1Q07817 233 aa6.56□□□□□ -1.36
SNHG1-212ENST00000539975 NSUN2Q08J23 767 aaKnown RBP eCLIP6.56□□□□□ -1.36
SNHG1-212ENST00000539975 GALNT2Q10471 571 aa6.56□□□□□ -1.36
SNHG1-212ENST00000539975 ZNF211Q13398 564 aaPredicted RBP6.56□□□□□ -1.36
SNHG1-212ENST00000539975 XRCC4Q13426 336 aa6.56□□□□□ -1.36
SNHG1-212ENST00000539975 ENPP2Q13822 863 aa6.56□□□□□ -1.36
SNHG1-212ENST00000539975 SIM2Q14190 667 aaPredicted RBP6.56□□□□□ -1.36
SNHG1-212ENST00000539975 PRPSAP1Q14558 356 aa6.56□□□□□ -1.36
SNHG1-212ENST00000539975 LLGL1Q15334 1064 aa6.56□□□□□ -1.36
SNHG1-212ENST00000539975 CST6Q15828 149 aa6.56□□□□□ -1.36
SNHG1-212ENST00000539975 LONRF2Q1L5Z9 754 aa6.56□□□□□ -1.36
SNHG1-212ENST00000539975 MYLK3Q32MK0 819 aa6.56□□□□□ -1.36
SNHG1-212ENST00000539975 HS1BP3Q53T59 392 aa6.56□□□□□ -1.36
SNHG1-212ENST00000539975 RALGPS1Q5JS13 557 aa6.56□□□□□ -1.36
SNHG1-212ENST00000539975 SYCP2LQ5T4T6 812 aa6.56□□□□□ -1.36
SNHG1-212ENST00000539975 C9orf64Q5T6V5 341 aa6.56□□□□□ -1.36
SNHG1-212ENST00000539975 NCBP2-AS2Q69YL0 99 aa6.56□□□□□ -1.36
SNHG1-212ENST00000539975 SLC9A4Q6AI14 798 aa6.56□□□□□ -1.36
SNHG1-212ENST00000539975 C22orf39Q6P5X5 142 aa6.56□□□□□ -1.36
SNHG1-212ENST00000539975 FBXL19Q6PCT2 694 aa6.56□□□□□ -1.36
SNHG1-212ENST00000539975 DARS2Q6PI48 645 aaKnown RBP6.56□□□□□ -1.36
SNHG1-212ENST00000539975 ZC3H18Q86VM9 953 aaKnown RBP6.56□□□□□ -1.36
SNHG1-212ENST00000539975 WDR5BQ86VZ2 330 aa6.56□□□□□ -1.36
SNHG1-212ENST00000539975 CPNE8Q86YQ8 564 aa6.56□□□□□ -1.36
SNHG1-212ENST00000539975 MMAAQ8IVH4 418 aaKnown RBP6.56□□□□□ -1.36
SNHG1-212ENST00000539975 CDKL3Q8IVW4 592 aaPredicted RBP6.56□□□□□ -1.36
SNHG1-212ENST00000539975 CCDC13Q8IYE1 715 aa6.56□□□□□ -1.36
SNHG1-212ENST00000539975 STK40Q8N2I9 435 aa6.56□□□□□ -1.36
SNHG1-212ENST00000539975 NPWQ8N729 165 aa6.56□□□□□ -1.36
SNHG1-212ENST00000539975 TMIEQ8NEW7 156 aa6.56□□□□□ -1.36
SNHG1-212ENST00000539975 OR52K2Q8NGK3 314 aa6.56□□□□□ -1.36
SNHG1-212ENST00000539975 KRT35Q92764 455 aa6.56□□□□□ -1.36
SNHG1-212ENST00000539975 FAF2Q96CS3 445 aa6.56□□□□□ -1.36
SNHG1-212ENST00000539975 ERLEC1Q96DZ1 483 aa6.56□□□□□ -1.36
SNHG1-212ENST00000539975 P2RY11Q96G91 374 aa6.56□□□□□ -1.36
SNHG1-212ENST00000539975 PBKQ96KB5 322 aa6.56□□□□□ -1.36
SNHG1-212ENST00000539975 MRGPRX3Q96LB0 322 aa6.56□□□□□ -1.36
SNHG1-212ENST00000539975 MRGPRX1Q96LB2 322 aa6.56□□□□□ -1.36
SNHG1-212ENST00000539975 TSGA13Q96PP4 275 aa6.56□□□□□ -1.36
SNHG1-212ENST00000539975 PPP1R2P1Q96PQ5 205 aa6.56□□□□□ -1.36
SNHG1-212ENST00000539975 PSMB7Q99436 277 aa6.56□□□□□ -1.36
SNHG1-212ENST00000539975 VAT1Q99536 393 aa6.56□□□□□ -1.36
SNHG1-212ENST00000539975 FRMD8P1Q9BZ68 369 aaPredicted RBP6.56□□□□□ -1.36
SNHG1-212ENST00000539975 TPSD1Q9BZJ3 242 aa6.56□□□□□ -1.36
SNHG1-212ENST00000539975 TM6SF2Q9BZW4 377 aa6.56□□□□□ -1.36
SNHG1-212ENST00000539975 POLR1EQ9GZS1 481 aaKnown RBP6.56□□□□□ -1.36
SNHG1-212ENST00000539975 BTBD1Q9H0C5 482 aa6.56□□□□□ -1.36
SNHG1-212ENST00000539975 RSPH9Q9H1X1 276 aaPredicted RBP6.56□□□□□ -1.36
SNHG1-212ENST00000539975 CARD9Q9H257 536 aa6.56□□□□□ -1.36
SNHG1-212ENST00000539975 KCNF1Q9H3M0 494 aa6.56□□□□□ -1.36
SNHG1-212ENST00000539975 SEMA4AQ9H3S1 761 aa6.56□□□□□ -1.36
SNHG1-212ENST00000539975 ZDHHC6Q9H6R6 413 aa6.56□□□□□ -1.36
SNHG1-212ENST00000539975 ATP13A3Q9H7F0 1226 aa6.56□□□□□ -1.36
SNHG1-212ENST00000539975 PRMT8Q9NR22 394 aaPredicted RBP6.56□□□□□ -1.36
SNHG1-212ENST00000539975 RBM22Q9NW64 420 aaKnown RBP eCLIP6.56□□□□□ -1.361e-8■■■□□ 18.1
SNHG1-212ENST00000539975 FBXL12Q9NXK8 326 aa6.56□□□□□ -1.36
SNHG1-212ENST00000539975 GOLGA6AQ9NYA3 693 aa6.56□□□□□ -1.36
SNHG1-212ENST00000539975 DTLQ9NZJ0 730 aa6.56□□□□□ -1.36
SNHG1-212ENST00000539975 ZNF212Q9UDV6 495 aa6.56□□□□□ -1.36
SNHG1-212ENST00000539975 FEZ2Q9UHY8 353 aaPredicted RBP6.56□□□□□ -1.36
SNHG1-212ENST00000539975 NEU3Q9UQ49 428 aa6.56□□□□□ -1.36
SNHG1-212ENST00000539975 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP6.56□□□□□ -1.36
SNHG1-212ENST00000539975 REV3LO60673 3130 aa6.56□□□□□ -1.36
SNHG1-212ENST00000539975 OBSL1O75147 1896 aa6.56□□□□□ -1.36
SNHG1-212ENST00000539975 HELZP42694 1942 aaKnown RBP6.55□□□□□ -1.36
SNHG1-212ENST00000539975 ANAPC1Q9H1A4 1944 aa6.55□□□□□ -1.36
SNHG1-212ENST00000539975 DOCK8Q8NF50 2099 aa6.55□□□□□ -1.36
SNHG1-212ENST00000539975 A0A0U1RQJ8 604 aa6.55□□□□□ -1.36
SNHG1-212ENST00000539975 C3orf70A6NLC5 250 aaPredicted RBP6.55□□□□□ -1.36
SNHG1-212ENST00000539975 K7ERQ8 282 aa6.55□□□□□ -1.36
SNHG1-212ENST00000539975 MSTNO14793 375 aa6.55□□□□□ -1.36
SNHG1-212ENST00000539975 SMAD6O43541 496 aaKnown RBP6.55□□□□□ -1.36
SNHG1-212ENST00000539975 MFSD11O43934 449 aa6.55□□□□□ -1.36
SNHG1-212ENST00000539975 MAFKO60675 156 aa6.55□□□□□ -1.36
SNHG1-212ENST00000539975 ZMPSTE24O75844 475 aa6.55□□□□□ -1.36
SNHG1-212ENST00000539975 JCHAINP01591 159 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms