RNA–Protein interactions for RNA: ENST00000539372.5

TNFRSF1A-212, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,063 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-212ENST00000539372 STAU2Q9NUL3 570 aaKnown RBP eCLIP19.25■□□□□ 0.67
TNFRSF1A-212ENST00000539372 NLGN3Q9NZ94 848 aa19.25■□□□□ 0.67
TNFRSF1A-212ENST00000539372 RAXQ9Y2V3 346 aa19.25■□□□□ 0.67
TNFRSF1A-212ENST00000539372 LUC7L2Q9Y383 392 aaKnown RBP19.25■□□□□ 0.67
TNFRSF1A-212ENST00000539372 TSPAN11A1L157 253 aa19.24■□□□□ 0.67
TNFRSF1A-212ENST00000539372 NEMP2A6NFY4 417 aa19.24■□□□□ 0.67
TNFRSF1A-212ENST00000539372 H3BM21 787 aa19.24■□□□□ 0.67
TNFRSF1A-212ENST00000539372 SCAMP1O15126 338 aa19.24■□□□□ 0.67
TNFRSF1A-212ENST00000539372 GYPCP04921 128 aa19.24■□□□□ 0.67
TNFRSF1A-212ENST00000539372 ALPPL2P10696 532 aa19.24■□□□□ 0.67
TNFRSF1A-212ENST00000539372 JUNDP17535 347 aa19.24■□□□□ 0.67
TNFRSF1A-212ENST00000539372 ARL4AP40617 200 aa19.24■□□□□ 0.67
TNFRSF1A-212ENST00000539372 ZNF135P52742 658 aaPredicted RBP19.24■□□□□ 0.67
TNFRSF1A-212ENST00000539372 ELP6Q0PNE2 266 aa19.24■□□□□ 0.67
TNFRSF1A-212ENST00000539372 EIF2B5Q13144 721 aaKnown RBP19.24■□□□□ 0.67
TNFRSF1A-212ENST00000539372 TARDBPQ13148 414 aaKnown RBP eCLIP19.24■□□□□ 0.67
TNFRSF1A-212ENST00000539372 PIGHQ14442 188 aaPredicted RBP19.24■□□□□ 0.67
TNFRSF1A-212ENST00000539372 GRM3Q14832 879 aa19.24■□□□□ 0.67
TNFRSF1A-212ENST00000539372 ACAP1Q15027 740 aa19.24■□□□□ 0.67
TNFRSF1A-212ENST00000539372 IRF4Q15306 451 aa19.24■□□□□ 0.67
TNFRSF1A-212ENST00000539372 DPYSL2Q16555 572 aa19.24■□□□□ 0.67
TNFRSF1A-212ENST00000539372 UGP2Q16851 508 aa19.24■□□□□ 0.67
TNFRSF1A-212ENST00000539372 ZSWIM9Q86XI8 627 aa19.24■□□□□ 0.67
TNFRSF1A-212ENST00000539372 TP53I13Q8NBR0 393 aaPredicted RBP19.24■□□□□ 0.67
TNFRSF1A-212ENST00000539372 HCAR2Q8TDS4 363 aa19.24■□□□□ 0.67
TNFRSF1A-212ENST00000539372 APOLD1Q96LR9 279 aa19.24■□□□□ 0.67
TNFRSF1A-212ENST00000539372 ZNF641Q96N77 438 aaPredicted RBP19.24■□□□□ 0.67
TNFRSF1A-212ENST00000539372 TUBGCP5Q96RT8 1024 aa19.24■□□□□ 0.67
TNFRSF1A-212ENST00000539372 C1QTNF7Q9BXJ2 289 aa19.24■□□□□ 0.67
TNFRSF1A-212ENST00000539372 ETNK2Q9NVF9 386 aa19.24■□□□□ 0.67
TNFRSF1A-212ENST00000539372 ANAPC7Q9UJX3 599 aa19.24■□□□□ 0.67
TNFRSF1A-212ENST00000539372 K7ESM1 405 aa19.23■□□□□ 0.67
TNFRSF1A-212ENST00000539372 MUSKO15146 869 aa19.23■□□□□ 0.67
TNFRSF1A-212ENST00000539372 CYP1A2P05177 515 aa19.23■□□□□ 0.67
TNFRSF1A-212ENST00000539372 RARAP10276 462 aa19.23■□□□□ 0.67
TNFRSF1A-212ENST00000539372 CSNK1DP48730 415 aa19.23■□□□□ 0.67
TNFRSF1A-212ENST00000539372 SUOXP51687 545 aa19.23■□□□□ 0.67
TNFRSF1A-212ENST00000539372 THOP1P52888 689 aa19.23■□□□□ 0.67
TNFRSF1A-212ENST00000539372 INSM1Q01101 510 aaPredicted RBP19.23■□□□□ 0.67
TNFRSF1A-212ENST00000539372 IL10RBQ08334 325 aa19.23■□□□□ 0.67
TNFRSF1A-212ENST00000539372 BOLA3Q53S33 107 aa19.23■□□□□ 0.67
TNFRSF1A-212ENST00000539372 ERAP2Q6P179 960 aa19.23■□□□□ 0.67
TNFRSF1A-212ENST00000539372 BRAT1Q6PJG6 821 aa19.23■□□□□ 0.67
TNFRSF1A-212ENST00000539372 POLNQ7Z5Q5 900 aa19.23■□□□□ 0.67
TNFRSF1A-212ENST00000539372 RBFAQ8N0V3 343 aa19.23■□□□□ 0.67
TNFRSF1A-212ENST00000539372 LMX1AQ8TE12 382 aa19.23■□□□□ 0.67
TNFRSF1A-212ENST00000539372 IQCDQ96DY2 449 aa19.23■□□□□ 0.67
TNFRSF1A-212ENST00000539372 TCEAL2Q9H3H9 227 aaPredicted RBP19.23■□□□□ 0.67
TNFRSF1A-212ENST00000539372 ATP13A3Q9H7F0 1226 aa19.23■□□□□ 0.67
TNFRSF1A-212ENST00000539372 PNMA8BQ9ULN7 279 aaPredicted RBP19.23■□□□□ 0.67
TNFRSF1A-212ENST00000539372 TTC24A2A3L6 582 aaPredicted RBP19.22■□□□□ 0.67
TNFRSF1A-212ENST00000539372 RIOK3O14730 519 aaKnown RBP19.22■□□□□ 0.67
TNFRSF1A-212ENST00000539372 AQP9O43315 295 aa19.22■□□□□ 0.67
TNFRSF1A-212ENST00000539372 CKMT1AP12532 417 aa19.22■□□□□ 0.67
TNFRSF1A-212ENST00000539372 C6P13671 934 aa19.22■□□□□ 0.67
TNFRSF1A-212ENST00000539372 PTMSP20962 102 aa19.22■□□□□ 0.67
TNFRSF1A-212ENST00000539372 SERPINA4P29622 427 aa19.22■□□□□ 0.67
TNFRSF1A-212ENST00000539372 CASP14P31944 242 aa19.22■□□□□ 0.67
TNFRSF1A-212ENST00000539372 SCNN1BP51168 640 aa19.22■□□□□ 0.67
TNFRSF1A-212ENST00000539372 SLC25A11Q02978 314 aaKnown RBP19.22■□□□□ 0.67
TNFRSF1A-212ENST00000539372 PTK2BQ14289 1009 aa19.22■□□□□ 0.67
TNFRSF1A-212ENST00000539372 RFTN1Q14699 578 aaPredicted RBP19.22■□□□□ 0.67
TNFRSF1A-212ENST00000539372 LBRQ14739 615 aaKnown RBP19.22■□□□□ 0.67
TNFRSF1A-212ENST00000539372 LRRC14Q15048 493 aa19.22■□□□□ 0.67
TNFRSF1A-212ENST00000539372 CCDC122Q5T0U0 273 aa19.22■□□□□ 0.67
TNFRSF1A-212ENST00000539372 ALKBH5Q6P6C2 394 aaKnown RBP19.22■□□□□ 0.67
TNFRSF1A-212ENST00000539372 C19orf48Q6RUI8 117 aa19.22■□□□□ 0.67
TNFRSF1A-212ENST00000539372 TMCO3Q6UWJ1 677 aa19.22■□□□□ 0.67
TNFRSF1A-212ENST00000539372 LZTR1Q8N653 840 aa19.22■□□□□ 0.67
TNFRSF1A-212ENST00000539372 PAF1Q8N7H5 531 aa19.22■□□□□ 0.67
TNFRSF1A-212ENST00000539372 CSPG4P5Q96PW8 444 aa19.22■□□□□ 0.67
TNFRSF1A-212ENST00000539372 DUSP23Q9BVJ7 150 aa19.22■□□□□ 0.67
TNFRSF1A-212ENST00000539372 XPO4Q9C0E2 1151 aaKnown RBP19.22■□□□□ 0.67
TNFRSF1A-212ENST00000539372 IP6K2Q9UHH9 426 aa19.22■□□□□ 0.67
TNFRSF1A-212ENST00000539372 ATP8A1Q9Y2Q0 1164 aa19.22■□□□□ 0.67
TNFRSF1A-212ENST00000539372 LY6G6EA0A0G2JKS1 128 aa19.21■□□□□ 0.67
TNFRSF1A-212ENST00000539372 EIF4A3P38919 411 aaKnown RBP19.21■□□□□ 0.67
TNFRSF1A-212ENST00000539372 MMP12P39900 470 aa19.21■□□□□ 0.67
TNFRSF1A-212ENST00000539372 SSR1P43307 286 aaKnown RBP19.21■□□□□ 0.67
TNFRSF1A-212ENST00000539372 LIG3P49916 1009 aa19.21■□□□□ 0.67
TNFRSF1A-212ENST00000539372 BCL2L1Q07817 233 aa19.21■□□□□ 0.67
TNFRSF1A-212ENST00000539372 SLC10A7Q0GE19 358 aa19.21■□□□□ 0.67
TNFRSF1A-212ENST00000539372 C1orf61Q13536 156 aa19.21■□□□□ 0.67
TNFRSF1A-212ENST00000539372 WSCD2Q2TBF2 565 aa19.21■□□□□ 0.67
TNFRSF1A-212ENST00000539372 DEFB133Q30KQ1 61 aa19.21■□□□□ 0.67
TNFRSF1A-212ENST00000539372 TMCO4Q5TGY1 634 aa19.21■□□□□ 0.67
TNFRSF1A-212ENST00000539372 PKD1L2Q7Z442 2459 aa19.21■□□□□ 0.67
TNFRSF1A-212ENST00000539372 PHACTR4Q8IZ21 702 aa19.21■□□□□ 0.67
TNFRSF1A-212ENST00000539372 NIPA2Q8N8Q9 360 aa19.21■□□□□ 0.67
TNFRSF1A-212ENST00000539372 NSMCE3Q96MG7 304 aa19.21■□□□□ 0.67
TNFRSF1A-212ENST00000539372 PCDH18Q9HCL0 1135 aa19.21■□□□□ 0.67
TNFRSF1A-212ENST00000539372 DKK4Q9UBT3 224 aa19.21■□□□□ 0.67
TNFRSF1A-212ENST00000539372 SEPT3Q9UH03 358 aa19.21■□□□□ 0.67
TNFRSF1A-212ENST00000539372 APOBEC3BQ9UH17 382 aaKnown RBP19.21■□□□□ 0.67
TNFRSF1A-212ENST00000539372 CLCA2Q9UQC9 943 aa19.21■□□□□ 0.67
TNFRSF1A-212ENST00000539372 U3KQA8 63 aa19.21■□□□□ 0.67
TNFRSF1A-212ENST00000539372 CHD6Q8TD26 2715 aa19.2■□□□□ 0.66
TNFRSF1A-212ENST00000539372 LZTS3O60299 673 aaPredicted RBP19.2■□□□□ 0.66
TNFRSF1A-212ENST00000539372 GCATO75600 419 aa19.2■□□□□ 0.66
TNFRSF1A-212ENST00000539372 YPEL5P62699 121 aa19.2■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms