RNA–Protein interactions for RNA: ENST00000538333.3

LIMK1-208, Transcript of LIM domain kinase 1, humanhuman

TSL 2 BASIC

Gene LIMK1, Length 2,170 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-208ENST00000538333 ADAM12O43184 909 aa14.12□□□□□ -0.15
LIMK1-208ENST00000538333 DCXO43602 365 aa14.12□□□□□ -0.15
LIMK1-208ENST00000538333 LDB2O43679 373 aa14.12□□□□□ -0.15
LIMK1-208ENST00000538333 KLHL41O60662 606 aa14.12□□□□□ -0.15
LIMK1-208ENST00000538333 TBX10O75333 385 aa14.12□□□□□ -0.15
LIMK1-208ENST00000538333 GNRH1P01148 92 aa14.12□□□□□ -0.15
LIMK1-208ENST00000538333 TFEBP19484 476 aa14.12□□□□□ -0.15
LIMK1-208ENST00000538333 PRDX6P30041 224 aa14.12□□□□□ -0.15
LIMK1-208ENST00000538333 ETFBP38117 255 aa14.12□□□□□ -0.15
LIMK1-208ENST00000538333 APLP1P51693 650 aa14.12□□□□□ -0.15
LIMK1-208ENST00000538333 CLCN5P51795 746 aa14.12□□□□□ -0.15
LIMK1-208ENST00000538333 KPNA1P52294 538 aaPredicted RBP14.12□□□□□ -0.15
LIMK1-208ENST00000538333 ACTR3P61158 418 aa14.12□□□□□ -0.15
LIMK1-208ENST00000538333 MXRA7P84157 204 aa14.12□□□□□ -0.15
LIMK1-208ENST00000538333 MTA1Q13330 715 aa14.12□□□□□ -0.15
LIMK1-208ENST00000538333 TMCO4Q5TGY1 634 aa14.12□□□□□ -0.15
LIMK1-208ENST00000538333 TXNDC5Q8NBS9 432 aaKnown RBP14.12□□□□□ -0.15
LIMK1-208ENST00000538333 SLAIN1Q8ND83 568 aa14.12□□□□□ -0.15
LIMK1-208ENST00000538333 CMTM5Q96DZ9 223 aa14.12□□□□□ -0.15
LIMK1-208ENST00000538333 NDNQ99608 321 aa14.12□□□□□ -0.15
LIMK1-208ENST00000538333 SEMA3CQ99985 751 aa14.12□□□□□ -0.15
LIMK1-208ENST00000538333 MRPL9Q9BYD2 267 aaKnown RBP14.12□□□□□ -0.15
LIMK1-208ENST00000538333 UNKQ9C0B0 810 aaKnown RBP14.12□□□□□ -0.15
LIMK1-208ENST00000538333 MFSD1Q9H3U5 465 aa14.12□□□□□ -0.15
LIMK1-208ENST00000538333 STOML1Q9UBI4 398 aa14.12□□□□□ -0.15
LIMK1-208ENST00000538333 TANC1Q9C0D5 1861 aa14.11□□□□□ -0.15
LIMK1-208ENST00000538333 PITPNM1O00562 1244 aa14.11□□□□□ -0.15
LIMK1-208ENST00000538333 WISP3O95389 354 aaPredicted RBP14.11□□□□□ -0.15
LIMK1-208ENST00000538333 EFEMP2O95967 443 aa14.11□□□□□ -0.15
LIMK1-208ENST00000538333 SLC6A4P31645 630 aa14.11□□□□□ -0.15
LIMK1-208ENST00000538333 ELF1P32519 619 aa14.11□□□□□ -0.15
LIMK1-208ENST00000538333 ACVR1Q04771 509 aa14.11□□□□□ -0.15
LIMK1-208ENST00000538333 BTKQ06187 659 aa14.11□□□□□ -0.15
LIMK1-208ENST00000538333 NSUN2Q08J23 767 aaKnown RBP eCLIP14.11□□□□□ -0.15
LIMK1-208ENST00000538333 KLF10Q13118 480 aa14.11□□□□□ -0.15
LIMK1-208ENST00000538333 FSCBQ5H9T9 825 aa14.11□□□□□ -0.15
LIMK1-208ENST00000538333 TECRLQ5HYJ1 363 aa14.11□□□□□ -0.15
LIMK1-208ENST00000538333 SEL1L3Q68CR1 1132 aa14.11□□□□□ -0.15
LIMK1-208ENST00000538333 ALG1LQ6GMV1 187 aa14.11□□□□□ -0.15
LIMK1-208ENST00000538333 RIPOR1Q6ZS17 1223 aa14.11□□□□□ -0.15
LIMK1-208ENST00000538333 SPNS2Q8IVW8 549 aa14.11□□□□□ -0.15
LIMK1-208ENST00000538333 PNPLA1Q8N8W4 532 aa14.11□□□□□ -0.15
LIMK1-208ENST00000538333 PDCD6IPQ8WUM4 868 aaKnown RBP14.11□□□□□ -0.15
LIMK1-208ENST00000538333 POLR1EQ9GZS1 481 aaKnown RBP14.11□□□□□ -0.15
LIMK1-208ENST00000538333 TBKBP1A7MCY6 615 aa14.1□□□□□ -0.15
LIMK1-208ENST00000538333 CCL22O00626 93 aa14.1□□□□□ -0.15
LIMK1-208ENST00000538333 HOXA2O43364 376 aa14.1□□□□□ -0.15
LIMK1-208ENST00000538333 NPHS1O60500 1241 aa14.1□□□□□ -0.15
LIMK1-208ENST00000538333 HOXD9P28356 352 aaPredicted RBP14.1□□□□□ -0.15
LIMK1-208ENST00000538333 SLC12A2P55011 1212 aa14.1□□□□□ -0.15
LIMK1-208ENST00000538333 DNAJB13P59910 316 aa14.1□□□□□ -0.15
LIMK1-208ENST00000538333 BTG3Q14201 252 aaPredicted RBP14.1□□□□□ -0.15
LIMK1-208ENST00000538333 DEFB115Q30KQ5 88 aa14.1□□□□□ -0.15
LIMK1-208ENST00000538333 FRMD7Q6ZUT3 714 aa14.1□□□□□ -0.15
LIMK1-208ENST00000538333 PTAR1Q7Z6K3 402 aaPredicted RBP14.1□□□□□ -0.15
LIMK1-208ENST00000538333 LGI2Q8N0V4 545 aa14.1□□□□□ -0.15
LIMK1-208ENST00000538333 FBXO22Q8NEZ5 403 aa14.1□□□□□ -0.15
LIMK1-208ENST00000538333 GIMAP7Q8NHV1 300 aa14.1□□□□□ -0.15
LIMK1-208ENST00000538333 GABPB2Q8TAK5 448 aaPredicted RBP14.1□□□□□ -0.15
LIMK1-208ENST00000538333 SHKBP1Q8TBC3 707 aa14.1□□□□□ -0.15
LIMK1-208ENST00000538333 NRG4Q8WWG1 115 aa14.1□□□□□ -0.15
LIMK1-208ENST00000538333 N4BP2L2Q92802 583 aaPredicted RBP14.1□□□□□ -0.15
LIMK1-208ENST00000538333 HDAC10Q969S8 669 aa14.1□□□□□ -0.15
LIMK1-208ENST00000538333 FEM1CQ96JP0 617 aa14.1□□□□□ -0.15
LIMK1-208ENST00000538333 CNDP1Q96KN2 507 aa14.1□□□□□ -0.15
LIMK1-208ENST00000538333 UBXN10Q96LJ8 280 aa14.1□□□□□ -0.15
LIMK1-208ENST00000538333 OSBPL1AQ9BXW6 950 aa14.1□□□□□ -0.15
LIMK1-208ENST00000538333 WDR55Q9H6Y2 383 aaPredicted RBP14.1□□□□□ -0.15
LIMK1-208ENST00000538333 KCTD3Q9Y597 815 aa14.1□□□□□ -0.15
LIMK1-208ENST00000538333 A0A0D9SEW6 157 aa14.1□□□□□ -0.15
LIMK1-208ENST00000538333 F5H5T6 163 aa14.1□□□□□ -0.15
LIMK1-208ENST00000538333 S1PR4O95977 384 aa14.1□□□□□ -0.15
LIMK1-208ENST00000538333 KPNA2P52292 529 aaKnown RBP14.1□□□□□ -0.15
LIMK1-208ENST00000538333 SLC34A1Q06495 639 aa14.1□□□□□ -0.15
LIMK1-208ENST00000538333 ASPHQ12797 758 aa14.1□□□□□ -0.15
LIMK1-208ENST00000538333 CSHL1Q14406 222 aa14.1□□□□□ -0.15
LIMK1-208ENST00000538333 TAF11Q15544 211 aa14.1□□□□□ -0.15
LIMK1-208ENST00000538333 LSM12Q3MHD2 195 aaKnown RBP14.1□□□□□ -0.15
LIMK1-208ENST00000538333 CMPK2Q5EBM0 449 aa14.1□□□□□ -0.15
LIMK1-208ENST00000538333 RALGPS1Q5JS13 557 aa14.1□□□□□ -0.15
LIMK1-208ENST00000538333 HECTD2Q5U5R9 776 aa14.1□□□□□ -0.15
LIMK1-208ENST00000538333 SLC8B1Q6J4K2 584 aa14.1□□□□□ -0.15
LIMK1-208ENST00000538333 PGM2L1Q6PCE3 622 aa14.1□□□□□ -0.15
LIMK1-208ENST00000538333 MYLK4Q86YV6 388 aaPredicted RBP14.1□□□□□ -0.15
LIMK1-208ENST00000538333 CFAP52Q8N1V2 620 aa14.1□□□□□ -0.15
LIMK1-208ENST00000538333 KDM1BQ8NB78 822 aa14.1□□□□□ -0.15
LIMK1-208ENST00000538333 OR52K2Q8NGK3 314 aa14.1□□□□□ -0.15
LIMK1-208ENST00000538333 STMN2Q93045 179 aa14.1□□□□□ -0.15
LIMK1-208ENST00000538333 NAF1Q96HR8 494 aaKnown RBP14.1□□□□□ -0.15
LIMK1-208ENST00000538333 ZNF599Q96NL3 588 aa14.1□□□□□ -0.15
LIMK1-208ENST00000538333 SEZ6LQ9BYH1 1024 aa14.1□□□□□ -0.15
LIMK1-208ENST00000538333 SHCBP1LQ9BZQ2 653 aa14.1□□□□□ -0.15
LIMK1-208ENST00000538333 ZNF385DQ9H6B1 395 aa14.1□□□□□ -0.15
LIMK1-208ENST00000538333 MARCH4Q9P2E8 410 aaPredicted RBP14.1□□□□□ -0.15
LIMK1-208ENST00000538333 VTI1BQ9UEU0 232 aa14.1□□□□□ -0.15
LIMK1-208ENST00000538333 MICAL3Q7RTP6 2002 aa14.1□□□□□ -0.15
LIMK1-208ENST00000538333 GOLGA8QA0A0J9YX86 632 aa14.09□□□□□ -0.15
LIMK1-208ENST00000538333 GOLGA8OA6NCC3 632 aa14.09□□□□□ -0.15
LIMK1-208ENST00000538333 OR51F1A6NGY5 319 aa14.09□□□□□ -0.15
LIMK1-208ENST00000538333 GOLGA8NF8WBI6 632 aa14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms