RNA–Protein interactions for RNA: ENST00000538266.5

SNHG1-208, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 347 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-208ENST00000538266 VCPIP1Q96JH7 1222 aa4.46□□□□□ -1.7
SNHG1-208ENST00000538266 MCEEQ96PE7 176 aa4.46□□□□□ -1.7
SNHG1-208ENST00000538266 ASB2Q96Q27 587 aa4.46□□□□□ -1.7
SNHG1-208ENST00000538266 PCDHB18PQ96TA0 734 aa4.46□□□□□ -1.7
SNHG1-208ENST00000538266 CHP1Q99653 195 aa4.46□□□□□ -1.7
SNHG1-208ENST00000538266 TACO1Q9BSH4 297 aaKnown RBP4.46□□□□□ -1.7
SNHG1-208ENST00000538266 SYT11Q9BT88 431 aa4.46□□□□□ -1.7
SNHG1-208ENST00000538266 SELENOOQ9BVL4 669 aa4.46□□□□□ -1.7
SNHG1-208ENST00000538266 FAM204AQ9H8W3 233 aa4.46□□□□□ -1.7
SNHG1-208ENST00000538266 KIF9Q9HAQ2 790 aa4.46□□□□□ -1.7
SNHG1-208ENST00000538266 POPDC2Q9HBU9 364 aa4.46□□□□□ -1.7
SNHG1-208ENST00000538266 ZFP14Q9HCL3 533 aa4.46□□□□□ -1.7
SNHG1-208ENST00000538266 MRPL47Q9HD33 250 aaKnown RBP4.46□□□□□ -1.7
SNHG1-208ENST00000538266 PARVAQ9NVD7 372 aa4.46□□□□□ -1.7
SNHG1-208ENST00000538266 MTPAPQ9NVV4 582 aaKnown RBP eCLIP4.46□□□□□ -1.7
SNHG1-208ENST00000538266 ASNSD1Q9NWL6 643 aa4.46□□□□□ -1.7
SNHG1-208ENST00000538266 SMPD4Q9NXE4 827 aa4.46□□□□□ -1.7
SNHG1-208ENST00000538266 GALNT8Q9NY28 637 aa4.46□□□□□ -1.7
SNHG1-208ENST00000538266 H2AFY2Q9P0M6 372 aaPredicted RBP4.46□□□□□ -1.7
SNHG1-208ENST00000538266 MYO1AQ9UBC5 1043 aa4.46□□□□□ -1.7
SNHG1-208ENST00000538266 CYTH4Q9UIA0 394 aa4.46□□□□□ -1.7
SNHG1-208ENST00000538266 ZFP69BQ9UJL9 534 aa4.46□□□□□ -1.7
SNHG1-208ENST00000538266 ASB1Q9Y576 335 aa4.46□□□□□ -1.7
SNHG1-208ENST00000538266 SPO11Q9Y5K1 396 aa4.46□□□□□ -1.7
SNHG1-208ENST00000538266 SCINQ9Y6U3 715 aa4.46□□□□□ -1.7
SNHG1-208ENST00000538266 ZNF638Q14966 1978 aaKnown RBP4.45□□□□□ -1.7
SNHG1-208ENST00000538266 OBSL1O75147 1896 aa4.45□□□□□ -1.7
SNHG1-208ENST00000538266 SYNJ2BP-COX16A0A087WUM0 186 aa4.45□□□□□ -1.7
SNHG1-208ENST00000538266 C2CD4DB7Z1M9 353 aa4.45□□□□□ -1.7
SNHG1-208ENST00000538266 SLC9A3R1O14745 358 aaPredicted RBP4.45□□□□□ -1.7
SNHG1-208ENST00000538266 DAB1O75553 588 aa4.45□□□□□ -1.7
SNHG1-208ENST00000538266 URI1O94763 535 aaPredicted RBP4.45□□□□□ -1.7
SNHG1-208ENST00000538266 ZRANB2O95218 330 aaKnown RBP eCLIP4.45□□□□□ -1.72e-9■■■■■ 30
SNHG1-208ENST00000538266 NDUFA10O95299 355 aa4.45□□□□□ -1.7
SNHG1-208ENST00000538266 FKBP9O95302 570 aa4.45□□□□□ -1.7
SNHG1-208ENST00000538266 OAS1P00973 400 aaKnown RBP4.45□□□□□ -1.7
SNHG1-208ENST00000538266 APOEP02649 317 aa4.45□□□□□ -1.7
SNHG1-208ENST00000538266 H2AFZP0C0S5 128 aa4.45□□□□□ -1.7
SNHG1-208ENST00000538266 ZDHHC11BP0C7U3 371 aa4.45□□□□□ -1.7
SNHG1-208ENST00000538266 SLC2A3P11169 496 aa4.45□□□□□ -1.7
SNHG1-208ENST00000538266 IL9P15248 144 aa4.45□□□□□ -1.7
SNHG1-208ENST00000538266 PDGFRAP16234 1089 aa4.45□□□□□ -1.7
SNHG1-208ENST00000538266 RRM1P23921 792 aa4.45□□□□□ -1.7
SNHG1-208ENST00000538266 PTX3P26022 381 aaPredicted RBP4.45□□□□□ -1.7
SNHG1-208ENST00000538266 AOAHP28039 575 aa4.45□□□□□ -1.7
SNHG1-208ENST00000538266 CASQ1P31415 396 aa4.45□□□□□ -1.7
SNHG1-208ENST00000538266 SDC4P31431 198 aa4.45□□□□□ -1.7
SNHG1-208ENST00000538266 MATKP42679 507 aa4.45□□□□□ -1.7
SNHG1-208ENST00000538266 GABRB2P47870 512 aa4.45□□□□□ -1.7
SNHG1-208ENST00000538266 KCNC1P48547 511 aa4.45□□□□□ -1.7
SNHG1-208ENST00000538266 HARS2P49590 506 aaKnown RBP4.45□□□□□ -1.7
SNHG1-208ENST00000538266 GSCP56915 257 aaPredicted RBP4.45□□□□□ -1.7
SNHG1-208ENST00000538266 IL2P60568 153 aa4.45□□□□□ -1.7
SNHG1-208ENST00000538266 GPC5P78333 572 aa4.45□□□□□ -1.7
SNHG1-208ENST00000538266 KRT83P78385 493 aa4.45□□□□□ -1.7
SNHG1-208ENST00000538266 SLC7A9P82251 487 aa4.45□□□□□ -1.7
SNHG1-208ENST00000538266 COG7P83436 770 aa4.45□□□□□ -1.7
SNHG1-208ENST00000538266 SLC20A2Q08357 652 aa4.45□□□□□ -1.7
SNHG1-208ENST00000538266 EFEMP1Q12805 493 aa4.45□□□□□ -1.7
SNHG1-208ENST00000538266 NME3Q13232 169 aa4.45□□□□□ -1.7
SNHG1-208ENST00000538266 MTA1Q13330 715 aa4.45□□□□□ -1.7
SNHG1-208ENST00000538266 MAMLD1Q13495 774 aa4.45□□□□□ -1.7
SNHG1-208ENST00000538266 TUBB2AQ13885 445 aa4.45□□□□□ -1.7
SNHG1-208ENST00000538266 ZNF268Q14587 947 aaPredicted RBP4.45□□□□□ -1.7
SNHG1-208ENST00000538266 KRTAP19-4Q3LI73 84 aa4.45□□□□□ -1.7
SNHG1-208ENST00000538266 RNF187Q5TA31 235 aaPredicted RBP4.45□□□□□ -1.7
SNHG1-208ENST00000538266 TRMT10BQ6PF06 316 aaKnown RBP4.45□□□□□ -1.7
SNHG1-208ENST00000538266 LCNL1Q6ZST4 164 aa4.45□□□□□ -1.7
SNHG1-208ENST00000538266 H2AFVQ71UI9 128 aa4.45□□□□□ -1.7
SNHG1-208ENST00000538266 FKBP9P1Q75LS8 142 aa4.45□□□□□ -1.7
SNHG1-208ENST00000538266 STRA8Q7Z7C7 330 aa4.45□□□□□ -1.7
SNHG1-208ENST00000538266 SCD5Q86SK9 330 aa4.45□□□□□ -1.7
SNHG1-208ENST00000538266 PHLDB2Q86SQ0 1253 aa4.45□□□□□ -1.7
SNHG1-208ENST00000538266 KIAA1328Q86T90 577 aa4.45□□□□□ -1.7
SNHG1-208ENST00000538266 XYLT1Q86Y38 959 aa4.45□□□□□ -1.7
SNHG1-208ENST00000538266 ARID3BQ8IVW6 561 aaPredicted RBP4.45□□□□□ -1.7
SNHG1-208ENST00000538266 YAF2Q8IY57 180 aa4.45□□□□□ -1.7
SNHG1-208ENST00000538266 MCOLN2Q8IZK6 566 aa4.45□□□□□ -1.7
SNHG1-208ENST00000538266 FEZF2Q8TBJ5 459 aa4.45□□□□□ -1.7
SNHG1-208ENST00000538266 NDRG1Q92597 394 aaKnown RBP4.45□□□□□ -1.7
SNHG1-208ENST00000538266 USP13Q92995 863 aaPredicted RBP4.45□□□□□ -1.7
SNHG1-208ENST00000538266 USP7Q93009 1102 aa4.45□□□□□ -1.7
SNHG1-208ENST00000538266 SERPINB11Q96P15 392 aa4.45□□□□□ -1.7
SNHG1-208ENST00000538266 MYADMQ96S97 322 aa4.45□□□□□ -1.7
SNHG1-208ENST00000538266 CYP2S1Q96SQ9 504 aa4.45□□□□□ -1.7
SNHG1-208ENST00000538266 KXD1Q9BQD3 176 aa4.45□□□□□ -1.7
SNHG1-208ENST00000538266 SPATA25Q9BR10 227 aa4.45□□□□□ -1.7
SNHG1-208ENST00000538266 TUBB2BQ9BVA1 445 aa4.45□□□□□ -1.7
SNHG1-208ENST00000538266 SLC46A2Q9BY10 475 aa4.45□□□□□ -1.7
SNHG1-208ENST00000538266 KRTAP9-2Q9BYQ4 174 aa4.45□□□□□ -1.7
SNHG1-208ENST00000538266 ISCUQ9H1K1 167 aa4.45□□□□□ -1.7
SNHG1-208ENST00000538266 SMOC2Q9H3U7 446 aa4.45□□□□□ -1.7
SNHG1-208ENST00000538266 TDP1Q9NUW8 608 aa4.45□□□□□ -1.7
SNHG1-208ENST00000538266 TMEM51Q9NW97 253 aa4.45□□□□□ -1.7
SNHG1-208ENST00000538266 DDIT4Q9NX09 232 aa4.45□□□□□ -1.7
SNHG1-208ENST00000538266 OSER1Q9NX31 292 aa4.45□□□□□ -1.7
SNHG1-208ENST00000538266 RRN3Q9NYV6 651 aa4.45□□□□□ -1.7
SNHG1-208ENST00000538266 TAS2R14Q9NYV8 317 aa4.45□□□□□ -1.7
SNHG1-208ENST00000538266 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP4.45□□□□□ -1.7
SNHG1-208ENST00000538266 CWC15Q9P013 229 aaKnown RBP4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms