RNA–Protein interactions for RNA: ENST00000537582.1

SFSWAP-206, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 1,576 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-206ENST00000537582 SMAPO00193 183 aa15.78■□□□□ 0.12
SFSWAP-206ENST00000537582 PGLSO95336 258 aa15.78■□□□□ 0.12
SFSWAP-206ENST00000537582 POP4O95707 220 aaKnown RBP15.78■□□□□ 0.12
SFSWAP-206ENST00000537582 TUBBP07437 444 aa15.78■□□□□ 0.12
SFSWAP-206ENST00000537582 COL9A1P20849 921 aa15.78■□□□□ 0.12
SFSWAP-206ENST00000537582 CES1P23141 567 aa15.78■□□□□ 0.12
SFSWAP-206ENST00000537582 TARSP26639 723 aaKnown RBP15.78■□□□□ 0.12
SFSWAP-206ENST00000537582 ELK3P41970 407 aa15.78■□□□□ 0.12
SFSWAP-206ENST00000537582 SEMG2Q02383 582 aa15.78■□□□□ 0.12
SFSWAP-206ENST00000537582 MSLNQ13421 630 aaPredicted RBP15.78■□□□□ 0.12
SFSWAP-206ENST00000537582 POU6F1Q14863 301 aa15.78■□□□□ 0.12
SFSWAP-206ENST00000537582 SLC14A2Q15849 920 aa15.78■□□□□ 0.12
SFSWAP-206ENST00000537582 CCDC38Q502W7 563 aa15.78■□□□□ 0.12
SFSWAP-206ENST00000537582 RALGPS1Q5JS13 557 aa15.78■□□□□ 0.12
SFSWAP-206ENST00000537582 CENPUQ71F23 418 aa15.78■□□□□ 0.12
SFSWAP-206ENST00000537582 CACUL1Q86Y37 369 aa15.78■□□□□ 0.12
SFSWAP-206ENST00000537582 PLPP6Q8IY26 295 aa15.78■□□□□ 0.12
SFSWAP-206ENST00000537582 ZBED8Q8IZ13 594 aa15.78■□□□□ 0.12
SFSWAP-206ENST00000537582 GJD3Q8N144 294 aa15.78■□□□□ 0.12
SFSWAP-206ENST00000537582 PDIK1LQ8N165 341 aa15.78■□□□□ 0.12
SFSWAP-206ENST00000537582 TXNDC5Q8NBS9 432 aaKnown RBP15.78■□□□□ 0.12
SFSWAP-206ENST00000537582 ZBTB9Q96C00 473 aa15.78■□□□□ 0.12
SFSWAP-206ENST00000537582 SIGLEC10Q96LC7 697 aa15.78■□□□□ 0.12
SFSWAP-206ENST00000537582 FOXQ1Q9C009 403 aa15.78■□□□□ 0.12
SFSWAP-206ENST00000537582 PLAC1Q9HBJ0 212 aa15.78■□□□□ 0.12
SFSWAP-206ENST00000537582 XAB2Q9HCS7 855 aaKnown RBP15.78■□□□□ 0.12
SFSWAP-206ENST00000537582 IL36AQ9UHA7 158 aa15.78■□□□□ 0.12
SFSWAP-206ENST00000537582 CHMP2BQ9UQN3 213 aa15.78■□□□□ 0.12
SFSWAP-206ENST00000537582 SPO11Q9Y5K1 396 aa15.78■□□□□ 0.12
SFSWAP-206ENST00000537582 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP15.77■□□□□ 0.11
SFSWAP-206ENST00000537582 NDC80O14777 642 aa15.77■□□□□ 0.11
SFSWAP-206ENST00000537582 HTRA2O43464 458 aaPredicted RBP15.77■□□□□ 0.11
SFSWAP-206ENST00000537582 PPFIA2O75334 1257 aa15.77■□□□□ 0.11
SFSWAP-206ENST00000537582 NDST3O95803 873 aa15.77■□□□□ 0.11
SFSWAP-206ENST00000537582 ALPIP09923 528 aa15.77■□□□□ 0.11
SFSWAP-206ENST00000537582 MLNP12872 115 aa15.77■□□□□ 0.11
SFSWAP-206ENST00000537582 CTPS1P17812 591 aa15.77■□□□□ 0.11
SFSWAP-206ENST00000537582 SERPINA4P29622 427 aa15.77■□□□□ 0.11
SFSWAP-206ENST00000537582 TNNT3P45378 269 aaPredicted RBP15.77■□□□□ 0.11
SFSWAP-206ENST00000537582 MAPK8P45983 427 aa15.77■□□□□ 0.11
SFSWAP-206ENST00000537582 CDH17Q12864 832 aa15.77■□□□□ 0.11
SFSWAP-206ENST00000537582 QPCTQ16769 361 aa15.77■□□□□ 0.11
SFSWAP-206ENST00000537582 BEND6Q5SZJ8 279 aaPredicted RBP15.77■□□□□ 0.11
SFSWAP-206ENST00000537582 GDPD4Q6W3E5 623 aa15.77■□□□□ 0.11
SFSWAP-206ENST00000537582 ZNF852Q6ZMS4 543 aa15.77■□□□□ 0.11
SFSWAP-206ENST00000537582 CAPN12Q6ZSI9 719 aa15.77■□□□□ 0.11
SFSWAP-206ENST00000537582 LINC00523Q86TU6 105 aa15.77■□□□□ 0.11
SFSWAP-206ENST00000537582 FBXO36Q8NEA4 188 aa15.77■□□□□ 0.11
SFSWAP-206ENST00000537582 RPLP0P6Q8NHW5 317 aa15.77■□□□□ 0.11
SFSWAP-206ENST00000537582 PIH1D2Q8WWB5 315 aa15.77■□□□□ 0.11
SFSWAP-206ENST00000537582 CAVIN3Q969G5 261 aa15.77■□□□□ 0.11
SFSWAP-206ENST00000537582 MSANTD3Q96H12 275 aa15.77■□□□□ 0.11
SFSWAP-206ENST00000537582 KLHL32Q96NJ5 620 aa15.77■□□□□ 0.11
SFSWAP-206ENST00000537582 CPEB1Q9BZB8 566 aaKnown RBP15.77■□□□□ 0.11
SFSWAP-206ENST00000537582 SLC6A17Q9H1V8 727 aa15.77■□□□□ 0.11
SFSWAP-206ENST00000537582 CDC42EP4Q9H3Q1 356 aaKnown RBP15.77■□□□□ 0.11
SFSWAP-206ENST00000537582 SEMA4AQ9H3S1 761 aa15.77■□□□□ 0.11
SFSWAP-206ENST00000537582 SUV39H2Q9H5I1 410 aa15.77■□□□□ 0.11
SFSWAP-206ENST00000537582 ARNT2Q9HBZ2 717 aa15.77■□□□□ 0.11
SFSWAP-206ENST00000537582 DYNC1LI1Q9Y6G9 523 aaKnown RBP15.77■□□□□ 0.11
SFSWAP-206ENST00000537582 TEX264Q9Y6I9 313 aa15.77■□□□□ 0.11
SFSWAP-206ENST00000537582 ATG2BQ96BY7 2078 aa15.77■□□□□ 0.11
SFSWAP-206ENST00000537582 MYLKQ15746 1914 aa15.76■□□□□ 0.11
SFSWAP-206ENST00000537582 PLK4O00444 970 aa15.76■□□□□ 0.11
SFSWAP-206ENST00000537582 SOCS5O75159 536 aa15.76■□□□□ 0.11
SFSWAP-206ENST00000537582 CHRNB1P11230 501 aa15.76■□□□□ 0.11
SFSWAP-206ENST00000537582 NTSR1P30989 418 aa15.76■□□□□ 0.11
SFSWAP-206ENST00000537582 MAGEA4P43358 317 aa15.76■□□□□ 0.11
SFSWAP-206ENST00000537582 SARNPP82979 210 aaKnown RBP15.76■□□□□ 0.11
SFSWAP-206ENST00000537582 SMAD1Q15797 465 aaKnown RBP15.76■□□□□ 0.11
SFSWAP-206ENST00000537582 UAP1Q16222 522 aaPredicted RBP15.76■□□□□ 0.11
SFSWAP-206ENST00000537582 ARMC12Q5T9G4 340 aa15.76■□□□□ 0.11
SFSWAP-206ENST00000537582 EMBQ6PCB8 327 aa15.76■□□□□ 0.11
SFSWAP-206ENST00000537582 CES3Q6UWW8 571 aa15.76■□□□□ 0.11
SFSWAP-206ENST00000537582 MMAAQ8IVH4 418 aaKnown RBP15.76■□□□□ 0.11
SFSWAP-206ENST00000537582 RMDN1Q96DB5 314 aa15.76■□□□□ 0.11
SFSWAP-206ENST00000537582 ECHDC3Q96DC8 303 aa15.76■□□□□ 0.11
SFSWAP-206ENST00000537582 TUBGCP5Q96RT8 1024 aa15.76■□□□□ 0.11
SFSWAP-206ENST00000537582 EPB41L4BQ9H329 900 aa15.76■□□□□ 0.11
SFSWAP-206ENST00000537582 NINJ2Q9NZG7 142 aa15.76■□□□□ 0.11
SFSWAP-206ENST00000537582 WNT16Q9UBV4 365 aa15.76■□□□□ 0.11
SFSWAP-206ENST00000537582 MAD1L1Q9Y6D9 718 aa15.76■□□□□ 0.11
SFSWAP-206ENST00000537582 ANKRD36A6QL64 1941 aa15.76■□□□□ 0.11
SFSWAP-206ENST00000537582 A0A1W2PQF6 199 aa15.75■□□□□ 0.11
SFSWAP-206ENST00000537582 MAN2B1O00754 1011 aa15.75■□□□□ 0.11
SFSWAP-206ENST00000537582 AURKAO14965 403 aa15.75■□□□□ 0.11
SFSWAP-206ENST00000537582 ALOX15BO15296 676 aa15.75■□□□□ 0.11
SFSWAP-206ENST00000537582 CPP00450 1065 aa15.75■□□□□ 0.11
SFSWAP-206ENST00000537582 EPOP01588 193 aa15.75■□□□□ 0.11
SFSWAP-206ENST00000537582 HLA-DPA1P20036 260 aa15.75■□□□□ 0.11
SFSWAP-206ENST00000537582 PRKCQQ04759 706 aa15.75■□□□□ 0.11
SFSWAP-206ENST00000537582 ELAVL3Q14576 367 aaKnown RBP15.75■□□□□ 0.11
SFSWAP-206ENST00000537582 UBXN2BQ14CS0 331 aa15.75■□□□□ 0.11
SFSWAP-206ENST00000537582 KYNUQ16719 465 aa15.75■□□□□ 0.11
SFSWAP-206ENST00000537582 CASC4Q6P4E1 433 aa15.75■□□□□ 0.11
SFSWAP-206ENST00000537582 PAF1Q8N7H5 531 aa15.75■□□□□ 0.11
SFSWAP-206ENST00000537582 UHMK1Q8TAS1 419 aaKnown RBP15.75■□□□□ 0.11
SFSWAP-206ENST00000537582 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP15.75■□□□□ 0.11
SFSWAP-206ENST00000537582 OR8D1Q8WZ84 308 aa15.75■□□□□ 0.11
SFSWAP-206ENST00000537582 CFAP36Q96G28 342 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms