RNA–Protein interactions for RNA: ENST00000536999.1

CHD4-206, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 3

Gene CHD4, Length 318 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-206ENST00000536999 PIK3C3Q8NEB9 887 aa5.87□□□□□ -1.47
CHD4-206ENST00000536999 TRPV3Q8NET8 790 aa5.87□□□□□ -1.47
CHD4-206ENST00000536999 PRSS33Q8NF86 280 aa5.87□□□□□ -1.47
CHD4-206ENST00000536999 OR5B17Q8NGF7 314 aa5.87□□□□□ -1.47
CHD4-206ENST00000536999 PCDH19Q8TAB3 1148 aa5.87□□□□□ -1.47
CHD4-206ENST00000536999 ACER1Q8TDN7 264 aa5.87□□□□□ -1.47
CHD4-206ENST00000536999 GIPC2Q8TF65 315 aa5.87□□□□□ -1.47
CHD4-206ENST00000536999 STYXQ8WUJ0 223 aa5.87□□□□□ -1.47
CHD4-206ENST00000536999 RASSF5Q8WWW0 418 aa5.87□□□□□ -1.47
CHD4-206ENST00000536999 BSNDQ8WZ55 320 aa5.87□□□□□ -1.47
CHD4-206ENST00000536999 PEX13Q92968 403 aa5.87□□□□□ -1.47
CHD4-206ENST00000536999 PGBD4Q96DM1 585 aa5.87□□□□□ -1.47
CHD4-206ENST00000536999 AURKBQ96GD4 344 aaPredicted RBP5.87□□□□□ -1.47
CHD4-206ENST00000536999 HPDLQ96IR7 371 aa5.87□□□□□ -1.47
CHD4-206ENST00000536999 PLEKHA8Q96JA3 519 aa5.87□□□□□ -1.47
CHD4-206ENST00000536999 SCYL1Q96KG9 808 aa5.87□□□□□ -1.47
CHD4-206ENST00000536999 C12orf42Q96LP6 360 aa5.87□□□□□ -1.47
CHD4-206ENST00000536999 GPR22Q99680 433 aa5.87□□□□□ -1.47
CHD4-206ENST00000536999 APBA2Q99767 749 aa5.87□□□□□ -1.47
CHD4-206ENST00000536999 PRRX2Q99811 253 aa5.87□□□□□ -1.47
CHD4-206ENST00000536999 SH3GL1Q99961 368 aa5.87□□□□□ -1.47
CHD4-206ENST00000536999 WDR83Q9BRX9 315 aaKnown RBP5.87□□□□□ -1.47
CHD4-206ENST00000536999 MTMR12Q9C0I1 747 aa5.87□□□□□ -1.47
CHD4-206ENST00000536999 XYLT2Q9H1B5 865 aa5.87□□□□□ -1.47
CHD4-206ENST00000536999 MTIF3Q9H2K0 278 aaKnown RBP5.87□□□□□ -1.47
CHD4-206ENST00000536999 FZD8Q9H461 694 aa5.87□□□□□ -1.47
CHD4-206ENST00000536999 EHD1Q9H4M9 534 aa5.87□□□□□ -1.47
CHD4-206ENST00000536999 TASP1Q9H6P5 420 aa5.87□□□□□ -1.47
CHD4-206ENST00000536999 BCAS3Q9H6U6 928 aa5.87□□□□□ -1.47
CHD4-206ENST00000536999 NGRNQ9NPE2 291 aaKnown RBP5.87□□□□□ -1.47
CHD4-206ENST00000536999 TRPV5Q9NQA5 729 aa5.87□□□□□ -1.47
CHD4-206ENST00000536999 DIABLOQ9NR28 239 aa5.87□□□□□ -1.47
CHD4-206ENST00000536999 RNF146Q9NTX7 359 aa5.87□□□□□ -1.47
CHD4-206ENST00000536999 TBC1D13Q9NVG8 400 aa5.87□□□□□ -1.47
CHD4-206ENST00000536999 PNPOQ9NVS9 261 aa5.87□□□□□ -1.47
CHD4-206ENST00000536999 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP5.87□□□□□ -1.47
CHD4-206ENST00000536999 TMEM216Q9P0N5 145 aa5.87□□□□□ -1.47
CHD4-206ENST00000536999 TMEM181Q9P2C4 612 aa5.87□□□□□ -1.47
CHD4-206ENST00000536999 NXF1Q9UBU9 619 aaKnown RBP5.87□□□□□ -1.47
CHD4-206ENST00000536999 TUBGCP4Q9UGJ1 667 aa5.87□□□□□ -1.47
CHD4-206ENST00000536999 ERGIC3Q9Y282 383 aa5.87□□□□□ -1.47
CHD4-206ENST00000536999 ZNF711Q9Y462 761 aa5.87□□□□□ -1.47
CHD4-206ENST00000536999 AFG3L2Q9Y4W6 797 aa5.87□□□□□ -1.47
CHD4-206ENST00000536999 ORC6Q9Y5N6 252 aa5.87□□□□□ -1.47
CHD4-206ENST00000536999 SNX13Q9Y5W8 968 aa5.87□□□□□ -1.47
CHD4-206ENST00000536999 SNX5Q9Y5X3 404 aa5.87□□□□□ -1.47
CHD4-206ENST00000536999 NUMBLQ9Y6R0 609 aa5.87□□□□□ -1.47
CHD4-206ENST00000536999 FAM186AA6NE01 2351 aa5.87□□□□□ -1.47
CHD4-206ENST00000536999 ANKRD11Q6UB99 2663 aaPredicted RBP5.86□□□□□ -1.47
CHD4-206ENST00000536999 PLXNA1Q9UIW2 1896 aa5.86□□□□□ -1.47
CHD4-206ENST00000536999 A0A1B0GVG6 124 aa5.86□□□□□ -1.47
CHD4-206ENST00000536999 DHRS12A0PJE2 317 aa5.86□□□□□ -1.47
CHD4-206ENST00000536999 WDR27A2RRH5 827 aa5.86□□□□□ -1.47
CHD4-206ENST00000536999 HMX2A2RU54 273 aa5.86□□□□□ -1.47
CHD4-206ENST00000536999 TBKBP1A7MCY6 615 aa5.86□□□□□ -1.47
CHD4-206ENST00000536999 CENPBD1B2RD01 187 aa5.86□□□□□ -1.47
CHD4-206ENST00000536999 H0Y626 953 aa5.86□□□□□ -1.47
CHD4-206ENST00000536999 VWA5AO00534 786 aa5.86□□□□□ -1.47
CHD4-206ENST00000536999 NFIBO00712 420 aa5.86□□□□□ -1.47
CHD4-206ENST00000536999 KIAA0355O15063 1070 aa5.86□□□□□ -1.47
CHD4-206ENST00000536999 ANGPT2O15123 496 aa5.86□□□□□ -1.47
CHD4-206ENST00000536999 CLOCKO15516 846 aa5.86□□□□□ -1.47
CHD4-206ENST00000536999 TBC1D4O60343 1298 aa5.86□□□□□ -1.47
CHD4-206ENST00000536999 HBP1O60381 514 aa5.86□□□□□ -1.47
CHD4-206ENST00000536999 BANF1O75531 89 aa5.86□□□□□ -1.47
CHD4-206ENST00000536999 CLPXO76031 633 aa5.86□□□□□ -1.47
CHD4-206ENST00000536999 UPP2O95045 317 aa5.86□□□□□ -1.47
CHD4-206ENST00000536999 VAPBO95292 243 aa5.86□□□□□ -1.47
CHD4-206ENST00000536999 RASAL1O95294 804 aa5.86□□□□□ -1.47
CHD4-206ENST00000536999 TRIM16O95361 564 aa5.86□□□□□ -1.47
CHD4-206ENST00000536999 PIGNO95427 931 aa5.86□□□□□ -1.47
CHD4-206ENST00000536999 MATN4O95460 622 aa5.86□□□□□ -1.47
CHD4-206ENST00000536999 CHEK2O96017 543 aa5.86□□□□□ -1.47
CHD4-206ENST00000536999 LDLRP01130 860 aa5.86□□□□□ -1.47
CHD4-206ENST00000536999 ALBP02768 609 aa5.86□□□□□ -1.47
CHD4-206ENST00000536999 KRT19P08727 400 aa5.86□□□□□ -1.47
CHD4-206ENST00000536999 GFAPP14136 432 aa5.86□□□□□ -1.47
CHD4-206ENST00000536999 IL4RP24394 825 aa5.86□□□□□ -1.47
CHD4-206ENST00000536999 EEF1DP29692 281 aaKnown RBP5.86□□□□□ -1.47
CHD4-206ENST00000536999 NOS2P35228 1153 aa5.86□□□□□ -1.47
CHD4-206ENST00000536999 CAPGP40121 348 aa5.86□□□□□ -1.47
CHD4-206ENST00000536999 MATKP42679 507 aa5.86□□□□□ -1.47
CHD4-206ENST00000536999 RPL34P49207 117 aaKnown RBP5.86□□□□□ -1.47
CHD4-206ENST00000536999 GALK1P51570 392 aa5.86□□□□□ -1.47
CHD4-206ENST00000536999 BCAP31P51572 246 aa5.86□□□□□ -1.47
CHD4-206ENST00000536999 NEK2P51955 445 aa5.86□□□□□ -1.47
CHD4-206ENST00000536999 THOP1P52888 689 aa5.86□□□□□ -1.47
CHD4-206ENST00000536999 TUBA1BP68363 451 aa5.86□□□□□ -1.47
CHD4-206ENST00000536999 GSTM4Q03013 218 aa5.86□□□□□ -1.47
CHD4-206ENST00000536999 MVKQ03426 396 aa5.86□□□□□ -1.47
CHD4-206ENST00000536999 BST2Q10589 180 aaKnown RBP5.86□□□□□ -1.47
CHD4-206ENST00000536999 PPIGQ13427 754 aaKnown RBP eCLIP5.86□□□□□ -1.473e-6■□□□□ 9.8
CHD4-206ENST00000536999 BAATQ14032 418 aaPredicted RBP5.86□□□□□ -1.47
CHD4-206ENST00000536999 COL9A2Q14055 689 aaPredicted RBP5.86□□□□□ -1.47
CHD4-206ENST00000536999 FASTKQ14296 549 aaKnown RBP5.86□□□□□ -1.47
CHD4-206ENST00000536999 USP10Q14694 798 aaKnown RBP5.86□□□□□ -1.47
CHD4-206ENST00000536999 PPP2R5DQ14738 602 aa5.86□□□□□ -1.47
CHD4-206ENST00000536999 TMEM132DQ14C87 1099 aa5.86□□□□□ -1.47
CHD4-206ENST00000536999 ACAP2Q15057 778 aa5.86□□□□□ -1.47
CHD4-206ENST00000536999 RPS6KA2Q15349 733 aa5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms