RNA–Protein interactions for RNA: ENST00000536194.1

TNFRSF1A-208, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 3

Gene TNFRSF1A, Length 581 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-208ENST00000536194 KIAA2013Q8IYS2 634 aa11.42□□□□□ -0.58
TNFRSF1A-208ENST00000536194 BBS5Q8N3I7 341 aa11.42□□□□□ -0.58
TNFRSF1A-208ENST00000536194 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.42□□□□□ -0.58
TNFRSF1A-208ENST00000536194 TRIM58Q8NG06 486 aa11.42□□□□□ -0.58
TNFRSF1A-208ENST00000536194 HCAR2Q8TDS4 363 aa11.42□□□□□ -0.58
TNFRSF1A-208ENST00000536194 TFB1MQ8WVM0 346 aaKnown RBP11.42□□□□□ -0.58
TNFRSF1A-208ENST00000536194 KLK6Q92876 244 aa11.42□□□□□ -0.58
TNFRSF1A-208ENST00000536194 RAB7BQ96AH8 199 aa11.42□□□□□ -0.58
TNFRSF1A-208ENST00000536194 QKIQ96PU8 341 aaKnown RBP eCLIP11.42□□□□□ -0.58
TNFRSF1A-208ENST00000536194 ALS2CR12Q96Q35 445 aa11.42□□□□□ -0.58
TNFRSF1A-208ENST00000536194 TLR10Q9BXR5 811 aa11.42□□□□□ -0.58
TNFRSF1A-208ENST00000536194 POLR1EQ9GZS1 481 aaKnown RBP11.42□□□□□ -0.58
TNFRSF1A-208ENST00000536194 BRD8Q9H0E9 1235 aa11.42□□□□□ -0.58
TNFRSF1A-208ENST00000536194 ATP13A3Q9H7F0 1226 aa11.42□□□□□ -0.58
TNFRSF1A-208ENST00000536194 TM9SF3Q9HD45 589 aa11.42□□□□□ -0.58
TNFRSF1A-208ENST00000536194 SEPT10Q9P0V9 454 aa11.42□□□□□ -0.58
TNFRSF1A-208ENST00000536194 AMACRQ9UHK6 382 aa11.42□□□□□ -0.58
TNFRSF1A-208ENST00000536194 PCDHGC4Q9Y5F7 938 aa11.42□□□□□ -0.58
TNFRSF1A-208ENST00000536194 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP11.41□□□□□ -0.58
TNFRSF1A-208ENST00000536194 A0A1W2PQU0 124 aa11.41□□□□□ -0.58
TNFRSF1A-208ENST00000536194 LNP1A1A4G5 178 aa11.41□□□□□ -0.58
TNFRSF1A-208ENST00000536194 BCAT2O15382 392 aaPredicted RBP11.41□□□□□ -0.58
TNFRSF1A-208ENST00000536194 GDF9O60383 454 aa11.41□□□□□ -0.58
TNFRSF1A-208ENST00000536194 SOCS5O75159 536 aa11.41□□□□□ -0.58
TNFRSF1A-208ENST00000536194 PCDH8O95206 1070 aa11.41□□□□□ -0.58
TNFRSF1A-208ENST00000536194 WNT1P04628 370 aa11.41□□□□□ -0.58
TNFRSF1A-208ENST00000536194 PRLRP16471 622 aa11.41□□□□□ -0.58
TNFRSF1A-208ENST00000536194 CD68P34810 354 aaPredicted RBP11.41□□□□□ -0.58
TNFRSF1A-208ENST00000536194 BNC1Q01954 994 aa11.41□□□□□ -0.58
TNFRSF1A-208ENST00000536194 SEMG2Q02383 582 aa11.41□□□□□ -0.58
TNFRSF1A-208ENST00000536194 ITKQ08881 620 aa11.41□□□□□ -0.58
TNFRSF1A-208ENST00000536194 CCDC15Q0P6D6 951 aa11.41□□□□□ -0.58
TNFRSF1A-208ENST00000536194 CCDC173Q0VFZ6 552 aa11.41□□□□□ -0.58
TNFRSF1A-208ENST00000536194 RALGDSQ12967 914 aa11.41□□□□□ -0.58
TNFRSF1A-208ENST00000536194 PTPRRQ15256 657 aa11.41□□□□□ -0.58
TNFRSF1A-208ENST00000536194 RPS6KA1Q15418 735 aa11.41□□□□□ -0.58
TNFRSF1A-208ENST00000536194 UGP2Q16851 508 aa11.41□□□□□ -0.58
TNFRSF1A-208ENST00000536194 DUOXA1Q1HG43 343 aa11.41□□□□□ -0.58
TNFRSF1A-208ENST00000536194 TEX44Q53QW1 395 aa11.41□□□□□ -0.58
TNFRSF1A-208ENST00000536194 RALGPS1Q5JS13 557 aa11.41□□□□□ -0.58
TNFRSF1A-208ENST00000536194 NEK5Q6P3R8 708 aa11.41□□□□□ -0.58
TNFRSF1A-208ENST00000536194 BRAT1Q6PJG6 821 aa11.41□□□□□ -0.58
TNFRSF1A-208ENST00000536194 BZW1Q7L1Q6 419 aaKnown RBP11.41□□□□□ -0.58
TNFRSF1A-208ENST00000536194 TTC7BQ86TV6 843 aa11.41□□□□□ -0.58
TNFRSF1A-208ENST00000536194 HORMAD1Q86X24 394 aa11.41□□□□□ -0.58
TNFRSF1A-208ENST00000536194 SPOCK2Q92563 424 aa11.41□□□□□ -0.58
TNFRSF1A-208ENST00000536194 SLC6A18Q96N87 628 aa11.41□□□□□ -0.58
TNFRSF1A-208ENST00000536194 PCDH12Q9NPG4 1184 aa11.41□□□□□ -0.58
TNFRSF1A-208ENST00000536194 TRMT1Q9NXH9 659 aaKnown RBP11.41□□□□□ -0.58
TNFRSF1A-208ENST00000536194 CA5BQ9Y2D0 317 aa11.41□□□□□ -0.58
TNFRSF1A-208ENST00000536194 R3HDM2Q9Y2K5 976 aaKnown RBP11.41□□□□□ -0.58
TNFRSF1A-208ENST00000536194 TTLL3Q9Y4R7 772 aa11.41□□□□□ -0.58
TNFRSF1A-208ENST00000536194 EP300Q09472 2414 aaPredicted RBP11.41□□□□□ -0.58
TNFRSF1A-208ENST00000536194 CACNA1EQ15878 2313 aa11.41□□□□□ -0.58
TNFRSF1A-208ENST00000536194 RIF1Q5UIP0 2472 aaKnown RBP11.41□□□□□ -0.58
TNFRSF1A-208ENST00000536194 A0A1B0GTW7 788 aa11.4□□□□□ -0.58
TNFRSF1A-208ENST00000536194 IGLON5A6NGN9 336 aa11.4□□□□□ -0.58
TNFRSF1A-208ENST00000536194 HACD1B0YJ81 288 aa11.4□□□□□ -0.58
TNFRSF1A-208ENST00000536194 RIOK3O14730 519 aaKnown RBP11.4□□□□□ -0.58
TNFRSF1A-208ENST00000536194 KHNYNO15037 678 aaKnown RBP11.4□□□□□ -0.58
TNFRSF1A-208ENST00000536194 SLC31A1O15431 190 aa11.4□□□□□ -0.58
TNFRSF1A-208ENST00000536194 FZD6O60353 706 aa11.4□□□□□ -0.58
TNFRSF1A-208ENST00000536194 TJP3O95049 919 aa11.4□□□□□ -0.58
TNFRSF1A-208ENST00000536194 PGLSO95336 258 aa11.4□□□□□ -0.58
TNFRSF1A-208ENST00000536194 PRLP01236 227 aa11.4□□□□□ -0.58
TNFRSF1A-208ENST00000536194 CFIP05156 583 aa11.4□□□□□ -0.58
TNFRSF1A-208ENST00000536194 PDHA1P08559 390 aa11.4□□□□□ -0.58
TNFRSF1A-208ENST00000536194 SERPINF2P08697 491 aa11.4□□□□□ -0.58
TNFRSF1A-208ENST00000536194 RBL1P28749 1068 aa11.4□□□□□ -0.58
TNFRSF1A-208ENST00000536194 MMP12P39900 470 aa11.4□□□□□ -0.58
TNFRSF1A-208ENST00000536194 DPP6P42658 865 aa11.4□□□□□ -0.58
TNFRSF1A-208ENST00000536194 CSNK1EP49674 416 aaKnown RBP11.4□□□□□ -0.58
TNFRSF1A-208ENST00000536194 SKOR1P84550 965 aa11.4□□□□□ -0.58
TNFRSF1A-208ENST00000536194 XRCC4Q13426 336 aa11.4□□□□□ -0.58
TNFRSF1A-208ENST00000536194 SLC45A4Q5BKX6 768 aa11.4□□□□□ -0.58
TNFRSF1A-208ENST00000536194 PRPF39Q86UA1 669 aaKnown RBP11.4□□□□□ -0.58
TNFRSF1A-208ENST00000536194 TMEM145Q8NBT3 493 aa11.4□□□□□ -0.58
TNFRSF1A-208ENST00000536194 TADA1Q96BN2 335 aa11.4□□□□□ -0.58
TNFRSF1A-208ENST00000536194 SERAC1Q96JX3 654 aa11.4□□□□□ -0.58
TNFRSF1A-208ENST00000536194 AGAP3Q96P47 875 aa11.4□□□□□ -0.58
TNFRSF1A-208ENST00000536194 SMIM14Q96QK8 99 aa11.4□□□□□ -0.58
TNFRSF1A-208ENST00000536194 MYOCQ99972 504 aa11.4□□□□□ -0.58
TNFRSF1A-208ENST00000536194 C1QTNF2Q9BXJ5 285 aa11.4□□□□□ -0.58
TNFRSF1A-208ENST00000536194 FZD3Q9NPG1 666 aa11.4□□□□□ -0.58
TNFRSF1A-208ENST00000536194 SUSD2Q9UGT4 822 aa11.4□□□□□ -0.58
TNFRSF1A-208ENST00000536194 PCDHB9Q9Y5E1 797 aa11.4□□□□□ -0.58
TNFRSF1A-208ENST00000536194 A0A0U1RQS6 177 aa11.39□□□□□ -0.59
TNFRSF1A-208ENST00000536194 A0A1B0GVT2 93 aa11.39□□□□□ -0.59
TNFRSF1A-208ENST00000536194 A0A1W2PR77 199 aa11.39□□□□□ -0.59
TNFRSF1A-208ENST00000536194 H7C0C1 242 aa11.39□□□□□ -0.59
TNFRSF1A-208ENST00000536194 CDX4O14627 284 aaPredicted RBP11.39□□□□□ -0.59
TNFRSF1A-208ENST00000536194 KCNK3O14649 394 aa11.39□□□□□ -0.59
TNFRSF1A-208ENST00000536194 ENC1O14682 589 aa11.39□□□□□ -0.59
TNFRSF1A-208ENST00000536194 RAD51BO15315 384 aa11.39□□□□□ -0.59
TNFRSF1A-208ENST00000536194 TSPAN6O43657 245 aa11.39□□□□□ -0.59
TNFRSF1A-208ENST00000536194 MMP20O60882 483 aa11.39□□□□□ -0.59
TNFRSF1A-208ENST00000536194 NEBLO76041 1014 aa11.39□□□□□ -0.59
TNFRSF1A-208ENST00000536194 CPP00450 1065 aa11.39□□□□□ -0.59
TNFRSF1A-208ENST00000536194 RBP3P10745 1247 aa11.39□□□□□ -0.59
TNFRSF1A-208ENST00000536194 GNSP15586 552 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms