RNA–Protein interactions for RNA: ENST00000534532.6

NCAPD3-213, Transcript of non-SMC condensin II complex subunit D3, human

TSL 2

Gene NCAPD3, Length 5,539 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NCAPD3-213	ENST00000534532	CDH4	P55283	916 aa		15.83	■□□□□ 0.12
NCAPD3-213	ENST00000534532	CCL14	Q16627	93 aa		15.83	■□□□□ 0.12
NCAPD3-213	ENST00000534532	ARSH	Q5FYA8	562 aa		15.83	■□□□□ 0.12
NCAPD3-213	ENST00000534532	TPGS2	Q68CL5	300 aa		15.83	■□□□□ 0.12
NCAPD3-213	ENST00000534532	ARHGAP17	Q68EM7	881 aa		15.83	■□□□□ 0.12
NCAPD3-213	ENST00000534532	GFM2	Q969S9	779 aa	Known RBP	15.83	■□□□□ 0.12
NCAPD3-213	ENST00000534532	NCAN	O14594	1321 aa		15.83	■□□□□ 0.12
NCAPD3-213	ENST00000534532	KRT33A	O76009	404 aa		15.83	■□□□□ 0.12
NCAPD3-213	ENST00000534532	VHL	P40337	213 aa		15.83	■□□□□ 0.12
NCAPD3-213	ENST00000534532	CRADD	P78560	199 aa		15.83	■□□□□ 0.12
NCAPD3-213	ENST00000534532	TAF13	Q15543	124 aa		15.83	■□□□□ 0.12
NCAPD3-213	ENST00000534532	TMC3	Q7Z5M5	1100 aa		15.83	■□□□□ 0.12
NCAPD3-213	ENST00000534532	EID3	Q8N140	333 aa		15.83	■□□□□ 0.12
NCAPD3-213	ENST00000534532	LEMD2	Q8NC56	503 aa		15.83	■□□□□ 0.12
NCAPD3-213	ENST00000534532	PLD4	Q96BZ4	506 aa		15.83	■□□□□ 0.12
NCAPD3-213	ENST00000534532	BDH2	Q9BUT1	245 aa		15.83	■□□□□ 0.12
NCAPD3-213	ENST00000534532	STBD1	O95210	358 aa		15.83	■□□□□ 0.12
NCAPD3-213	ENST00000534532	ANXA6	P08133	673 aa		15.83	■□□□□ 0.12
NCAPD3-213	ENST00000534532	ARL14EP	Q8N8R7	260 aa	Predicted RBP	15.83	■□□□□ 0.12
NCAPD3-213	ENST00000534532	HDAC10	Q969S8	669 aa		15.83	■□□□□ 0.12
NCAPD3-213	ENST00000534532	FBXO5	Q9UKT4	447 aa		15.83	■□□□□ 0.12
NCAPD3-213	ENST00000534532	INVS	Q9Y283	1065 aa		15.83	■□□□□ 0.12
NCAPD3-213	ENST00000534532	OTC	P00480	354 aa		15.82	■□□□□ 0.12
NCAPD3-213	ENST00000534532	KCNA3	P22001	575 aa		15.82	■□□□□ 0.12
NCAPD3-213	ENST00000534532	SERPINB3	P29508	390 aa		15.82	■□□□□ 0.12
NCAPD3-213	ENST00000534532	ABCG1	P45844	678 aa		15.82	■□□□□ 0.12
NCAPD3-213	ENST00000534532	LILRA4	P59901	499 aa		15.82	■□□□□ 0.12
NCAPD3-213	ENST00000534532	SLC20A2	Q08357	652 aa		15.82	■□□□□ 0.12
NCAPD3-213	ENST00000534532	GALNT13	Q8IUC8	556 aa		15.82	■□□□□ 0.12
NCAPD3-213	ENST00000534532	SEPHS2	Q99611	448 aa		15.82	■□□□□ 0.12
NCAPD3-213	ENST00000534532	KCTD5	Q9NXV2	234 aa		15.82	■□□□□ 0.12
NCAPD3-213	ENST00000534532	DUSP12	Q9UNI6	340 aa		15.82	■□□□□ 0.12
NCAPD3-213	ENST00000534532		H3BN98	237 aa		15.82	■□□□□ 0.12
NCAPD3-213	ENST00000534532	GNS	P15586	552 aa		15.82	■□□□□ 0.12
NCAPD3-213	ENST00000534532	SH3D19	Q5HYK7	790 aa		15.82	■□□□□ 0.12
NCAPD3-213	ENST00000534532	C17orf64	Q86WR6	236 aa		15.82	■□□□□ 0.12
NCAPD3-213	ENST00000534532	IL12RB2	Q99665	862 aa		15.82	■□□□□ 0.12
NCAPD3-213	ENST00000534532	DDX28	Q9NUL7	540 aa	Known RBP	15.82	■□□□□ 0.12
NCAPD3-213	ENST00000534532	EVL	Q9UI08	416 aa	Predicted RBP	15.82	■□□□□ 0.12
NCAPD3-213	ENST00000534532	CHKB	Q9Y259	395 aa		15.82	■□□□□ 0.12
NCAPD3-213	ENST00000534532	COPG1	Q9Y678	874 aa	Known RBP	15.82	■□□□□ 0.12
NCAPD3-213	ENST00000534532	COLEC10	Q9Y6Z7	277 aa		15.82	■□□□□ 0.12
NCAPD3-213	ENST00000534532	ADGRB2	O60241	1585 aa		15.82	■□□□□ 0.12
NCAPD3-213	ENST00000534532	C3	P01024	1663 aa		15.82	■□□□□ 0.12
NCAPD3-213	ENST00000534532	ATG13	O75143	517 aa		15.82	■□□□□ 0.12
NCAPD3-213	ENST00000534532	POP4	O95707	220 aa	Known RBP	15.82	■□□□□ 0.12
NCAPD3-213	ENST00000534532	PTPN9	P43378	593 aa		15.82	■□□□□ 0.12
NCAPD3-213	ENST00000534532	CXCR3	P49682	368 aa		15.82	■□□□□ 0.12
NCAPD3-213	ENST00000534532	TBX2	Q13207	712 aa	Predicted RBP	15.82	■□□□□ 0.12
NCAPD3-213	ENST00000534532	OLFML2B	Q68BL8	750 aa		15.82	■□□□□ 0.12
NCAPD3-213	ENST00000534532	C16orf62	Q7Z3J2	963 aa		15.82	■□□□□ 0.12
NCAPD3-213	ENST00000534532	TAF8	Q7Z7C8	310 aa		15.82	■□□□□ 0.12
NCAPD3-213	ENST00000534532	DHFR2	Q86XF0	187 aa		15.82	■□□□□ 0.12
NCAPD3-213	ENST00000534532	DEFB107A	Q8IZN7	70 aa		15.82	■□□□□ 0.12
NCAPD3-213	ENST00000534532	C1orf127	Q8N9H9	656 aa		15.82	■□□□□ 0.12
NCAPD3-213	ENST00000534532	DQX1	Q8TE96	717 aa	Known RBP	15.82	■□□□□ 0.12
NCAPD3-213	ENST00000534532	HNRNPAB	Q99729	332 aa	Known RBP	15.82	■□□□□ 0.12
NCAPD3-213	ENST00000534532	B3GNT5	Q9BYG0	378 aa		15.82	■□□□□ 0.12
NCAPD3-213	ENST00000534532	ST6GALNAC4	Q9H4F1	302 aa		15.82	■□□□□ 0.12
NCAPD3-213	ENST00000534532	AGO3	Q9H9G7	860 aa	Known RBP	15.82	■□□□□ 0.12
NCAPD3-213	ENST00000534532	PCDH18	Q9HCL0	1135 aa		15.82	■□□□□ 0.12
NCAPD3-213	ENST00000534532	GLYATL1P3	A0A0U1RQE8	302 aa		15.82	■□□□□ 0.12
NCAPD3-213	ENST00000534532	SLC28A1	O00337	649 aa		15.82	■□□□□ 0.12
NCAPD3-213	ENST00000534532	SYN1	P17600	705 aa		15.82	■□□□□ 0.12
NCAPD3-213	ENST00000534532	CRAT	P43155	626 aa		15.82	■□□□□ 0.12
NCAPD3-213	ENST00000534532	SP2	Q02086	613 aa		15.82	■□□□□ 0.12
NCAPD3-213	ENST00000534532	USP4	Q13107	963 aa		15.82	■□□□□ 0.12
NCAPD3-213	ENST00000534532	ECM1	Q16610	540 aa		15.82	■□□□□ 0.12
NCAPD3-213	ENST00000534532	NDUFA9	Q16795	377 aa		15.82	■□□□□ 0.12
NCAPD3-213	ENST00000534532	MIIP	Q5JXC2	388 aa		15.82	■□□□□ 0.12
NCAPD3-213	ENST00000534532	ZBTB49	Q6ZSB9	765 aa		15.82	■□□□□ 0.12
NCAPD3-213	ENST00000534532	CCDC185	Q8N715	623 aa		15.82	■□□□□ 0.12
NCAPD3-213	ENST00000534532	CLP1	Q92989	425 aa	Known RBP	15.82	■□□□□ 0.12
NCAPD3-213	ENST00000534532	REXO5	Q96IC2	774 aa	Known RBP	15.82	■□□□□ 0.12
NCAPD3-213	ENST00000534532	CYLD	Q9NQC7	956 aa		15.82	■□□□□ 0.12
NCAPD3-213	ENST00000534532	COL20A1	Q9P218	1284 aa		15.82	■□□□□ 0.12
NCAPD3-213	ENST00000534532	ZNF214	Q9UL59	606 aa	Predicted RBP	15.82	■□□□□ 0.12
NCAPD3-213	ENST00000534532	C5orf60	A6NFR6	353 aa		15.81	■□□□□ 0.12
NCAPD3-213	ENST00000534532		H3BM21	787 aa		15.81	■□□□□ 0.12
NCAPD3-213	ENST00000534532	ALAD	P13716	330 aa		15.81	■□□□□ 0.12
NCAPD3-213	ENST00000534532	RAB10	P61026	200 aa		15.81	■□□□□ 0.12
NCAPD3-213	ENST00000534532	GTF2IRD1	Q9UHL9	959 aa		15.81	■□□□□ 0.12
NCAPD3-213	ENST00000534532	STXBP5L	Q9Y2K9	1186 aa		15.81	■□□□□ 0.12
NCAPD3-213	ENST00000534532	LTBP3	Q9NS15	1303 aa		15.81	■□□□□ 0.12
NCAPD3-213	ENST00000534532		E9PAM4	449 aa		15.81	■□□□□ 0.12
NCAPD3-213	ENST00000534532	FSTL1	Q12841	308 aa		15.81	■□□□□ 0.12
NCAPD3-213	ENST00000534532	CHSY3	Q70JA7	882 aa		15.81	■□□□□ 0.12
NCAPD3-213	ENST00000534532	PAPOLB	Q9NRJ5	636 aa	Known RBP	15.81	■□□□□ 0.12
NCAPD3-213	ENST00000534532	KCNH1	O95259	989 aa		15.81	■□□□□ 0.12
NCAPD3-213	ENST00000534532	TYW3	Q6IPR3	259 aa	Known RBP	15.81	■□□□□ 0.12
NCAPD3-213	ENST00000534532	CAPN13	Q6MZZ7	669 aa	Predicted RBP	15.81	■□□□□ 0.12
NCAPD3-213	ENST00000534532	R3HCC1L	Q7Z5L2	792 aa	Known RBP	15.81	■□□□□ 0.12
NCAPD3-213	ENST00000534532	EPS8L2	Q9H6S3	715 aa		15.81	■□□□□ 0.12
NCAPD3-213	ENST00000534532	CCDC167	Q9P0B6	97 aa		15.81	■□□□□ 0.12
NCAPD3-213	ENST00000534532	SLC38A8	A6NNN8	435 aa		15.81	■□□□□ 0.12
NCAPD3-213	ENST00000534532	FSBP	O95073	299 aa		15.81	■□□□□ 0.12
NCAPD3-213	ENST00000534532	RASGRP1	O95267	797 aa		15.81	■□□□□ 0.12
NCAPD3-213	ENST00000534532	ATG7	O95352	703 aa		15.81	■□□□□ 0.12
NCAPD3-213	ENST00000534532	RPL17	P18621	184 aa	Known RBP	15.81	■□□□□ 0.12
NCAPD3-213	ENST00000534532	EPOR	P19235	508 aa		15.81	■□□□□ 0.12

Retrieved 100 of 20,778 RNA–protein pairs in 22 ms