RNA–Protein interactions for RNA: ENST00000534062.1

RTL1-201, Transcript of retrotransposon Gag like 1, humanhuman

APPRIS P1 BASIC

Gene RTL1, Length 4,193 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTL1-201ENST00000534062 SMYD1Q8NB12 490 aa9.68□□□□□ -0.86
RTL1-201ENST00000534062 ARHGEF2Q92974 986 aaKnown RBP9.68□□□□□ -0.86
RTL1-201ENST00000534062 ATXN7L3BQ96GX2 97 aa9.68□□□□□ -0.86
RTL1-201ENST00000534062 ZFRQ96KR1 1074 aaKnown RBP9.68□□□□□ -0.86
RTL1-201ENST00000534062 ABCB8Q9NUT2 735 aa9.68□□□□□ -0.86
RTL1-201ENST00000534062 SYBUQ9NX95 663 aa9.68□□□□□ -0.86
RTL1-201ENST00000534062 TMEM98Q9Y2Y6 226 aa9.68□□□□□ -0.86
RTL1-201ENST00000534062 GOLGA8TH3BQL2 631 aa9.68□□□□□ -0.86
RTL1-201ENST00000534062 ALOX15BO15296 676 aa9.68□□□□□ -0.86
RTL1-201ENST00000534062 GJB3O75712 270 aa9.68□□□□□ -0.86
RTL1-201ENST00000534062 HNRNPDQ14103 355 aaKnown RBP9.68□□□□□ -0.86
RTL1-201ENST00000534062 LRRC49Q8IUZ0 686 aa9.68□□□□□ -0.86
RTL1-201ENST00000534062 GDAP1Q8TB36 358 aa9.68□□□□□ -0.86
RTL1-201ENST00000534062 OXNAD1Q96HP4 312 aaPredicted RBP9.68□□□□□ -0.86
RTL1-201ENST00000534062 LRRC3Q9BY71 257 aa9.68□□□□□ -0.86
RTL1-201ENST00000534062 POLR1EQ9GZS1 481 aaKnown RBP9.68□□□□□ -0.86
RTL1-201ENST00000534062 ZNF576Q9H609 170 aa9.68□□□□□ -0.86
RTL1-201ENST00000534062 CNOT10Q9H9A5 744 aaKnown RBP9.68□□□□□ -0.86
RTL1-201ENST00000534062 LRRC40Q9H9A6 602 aa9.68□□□□□ -0.86
RTL1-201ENST00000534062 SFXN1Q9H9B4 322 aa9.68□□□□□ -0.86
RTL1-201ENST00000534062 IGSF9Q9P2J2 1179 aa9.68□□□□□ -0.86
RTL1-201ENST00000534062 FCF1Q9Y324 198 aaKnown RBP9.68□□□□□ -0.86
RTL1-201ENST00000534062 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.67□□□□□ -0.86
RTL1-201ENST00000534062 IGLV3-10A0A075B6K4 115 aa9.67□□□□□ -0.86
RTL1-201ENST00000534062 BHMG1C9JSJ3 638 aaPredicted RBP9.67□□□□□ -0.86
RTL1-201ENST00000534062 SLC7A9P82251 487 aa9.67□□□□□ -0.86
RTL1-201ENST00000534062 IL10RBQ08334 325 aa9.67□□□□□ -0.86
RTL1-201ENST00000534062 LY6G5CQ5SRR4 150 aa9.67□□□□□ -0.86
RTL1-201ENST00000534062 FAM47EQ6ZV65 393 aa9.67□□□□□ -0.86
RTL1-201ENST00000534062 CAND1Q86VP6 1230 aaKnown RBP9.67□□□□□ -0.86
RTL1-201ENST00000534062 YAF2Q8IY57 180 aa9.67□□□□□ -0.86
RTL1-201ENST00000534062 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP9.67□□□□□ -0.86
RTL1-201ENST00000534062 WFDC5Q8TCV5 224 aa9.67□□□□□ -0.86
RTL1-201ENST00000534062 PPP4R1Q8TF05 950 aa9.67□□□□□ -0.86
RTL1-201ENST00000534062 SKA2Q8WVK7 121 aaPredicted RBP9.67□□□□□ -0.86
RTL1-201ENST00000534062 NCSTNQ92542 709 aa9.67□□□□□ -0.86
RTL1-201ENST00000534062 TBL1YQ9BQ87 522 aa9.67□□□□□ -0.86
RTL1-201ENST00000534062 NMRK1Q9NWW6 199 aa9.67□□□□□ -0.86
RTL1-201ENST00000534062 SEPT3Q9UH03 358 aa9.67□□□□□ -0.86
RTL1-201ENST00000534062 ARHGAP26Q9UNA1 814 aa9.67□□□□□ -0.86
RTL1-201ENST00000534062 GREB1Q4ZG55 1949 aa9.67□□□□□ -0.86
RTL1-201ENST00000534062 AP2A1O95782 977 aa9.67□□□□□ -0.86
RTL1-201ENST00000534062 TPSB2P20231 275 aa9.67□□□□□ -0.86
RTL1-201ENST00000534062 WNT3AP56704 352 aa9.67□□□□□ -0.86
RTL1-201ENST00000534062 RCN2Q14257 317 aa9.67□□□□□ -0.86
RTL1-201ENST00000534062 TPSAB1Q15661 275 aa9.67□□□□□ -0.86
RTL1-201ENST00000534062 DUSP6Q16828 381 aa9.67□□□□□ -0.86
RTL1-201ENST00000534062 KLHL38Q2WGJ6 581 aa9.67□□□□□ -0.86
RTL1-201ENST00000534062 ZNF683Q8IZ20 524 aa9.67□□□□□ -0.86
RTL1-201ENST00000534062 EFHBQ8N7U6 833 aa9.67□□□□□ -0.86
RTL1-201ENST00000534062 LEMD2Q8NC56 503 aa9.67□□□□□ -0.86
RTL1-201ENST00000534062 BLOC1S5Q8TDH9 187 aa9.67□□□□□ -0.86
RTL1-201ENST00000534062 TSGA13Q96PP4 275 aa9.67□□□□□ -0.86
RTL1-201ENST00000534062 SCUBE2Q9NQ36 999 aa9.67□□□□□ -0.86
RTL1-201ENST00000534062 KLHL14Q9P2G3 628 aa9.67□□□□□ -0.86
RTL1-201ENST00000534062 BUD23O43709 281 aaKnown RBP9.67□□□□□ -0.86
RTL1-201ENST00000534062 SUPT3HO75486 399 aa9.67□□□□□ -0.86
RTL1-201ENST00000534062 KRT38O76015 456 aa9.67□□□□□ -0.86
RTL1-201ENST00000534062 TMCC1O94876 653 aa9.67□□□□□ -0.86
RTL1-201ENST00000534062 GSTA2P09210 222 aa9.67□□□□□ -0.86
RTL1-201ENST00000534062 STAT4Q14765 748 aa9.67□□□□□ -0.86
RTL1-201ENST00000534062 CCDC6Q16204 474 aa9.67□□□□□ -0.86
RTL1-201ENST00000534062 ZBTB8BQ8NAP8 495 aaPredicted RBP9.67□□□□□ -0.86
RTL1-201ENST00000534062 ADAMTS19Q8TE59 1207 aa9.67□□□□□ -0.86
RTL1-201ENST00000534062 KLF6Q99612 283 aaPredicted RBP9.67□□□□□ -0.86
RTL1-201ENST00000534062 MLPHQ9BV36 600 aaPredicted RBP9.67□□□□□ -0.86
RTL1-201ENST00000534062 C2orf49Q9BVC5 232 aaPredicted RBP9.67□□□□□ -0.86
RTL1-201ENST00000534062 FRMD8Q9BZ67 464 aaPredicted RBP9.67□□□□□ -0.86
RTL1-201ENST00000534062 MLXIPLQ9NP71 852 aa9.67□□□□□ -0.86
RTL1-201ENST00000534062 DUS2Q9NX74 493 aaKnown RBP9.67□□□□□ -0.86
RTL1-201ENST00000534062 F5P12259 2224 aa9.67□□□□□ -0.86
RTL1-201ENST00000534062 ILVBLA1L0T0 632 aa9.67□□□□□ -0.86
RTL1-201ENST00000534062 GOLGA8RI6L899 631 aa9.67□□□□□ -0.86
RTL1-201ENST00000534062 SERPINF2P08697 491 aa9.67□□□□□ -0.86
RTL1-201ENST00000534062 IFI35P80217 286 aaPredicted RBP9.67□□□□□ -0.86
RTL1-201ENST00000534062 CDH17Q12864 832 aa9.67□□□□□ -0.86
RTL1-201ENST00000534062 GALNT3Q14435 633 aa9.67□□□□□ -0.86
RTL1-201ENST00000534062 MUM1Q2TAK8 710 aa9.67□□□□□ -0.86
RTL1-201ENST00000534062 KBTBD12Q3ZCT8 623 aa9.67□□□□□ -0.86
RTL1-201ENST00000534062 ATAT1Q5SQI0 421 aa9.67□□□□□ -0.86
RTL1-201ENST00000534062 RETSATQ6NUM9 610 aa9.67□□□□□ -0.86
RTL1-201ENST00000534062 APCDD1Q8J025 514 aa9.67□□□□□ -0.86
RTL1-201ENST00000534062 AFAP1L2Q8N4X5 818 aa9.67□□□□□ -0.86
RTL1-201ENST00000534062 ZNF276Q8N554 614 aa9.67□□□□□ -0.86
RTL1-201ENST00000534062 OR6P1Q8NGX9 317 aa9.67□□□□□ -0.86
RTL1-201ENST00000534062 ZNF707Q96C28 371 aaPredicted RBP9.67□□□□□ -0.86
RTL1-201ENST00000534062 MRPL38Q96DV4 380 aaKnown RBP9.67□□□□□ -0.86
RTL1-201ENST00000534062 CYTH2Q99418 400 aa9.67□□□□□ -0.86
RTL1-201ENST00000534062 NSUN3Q9H649 340 aaKnown RBP9.67□□□□□ -0.86
RTL1-201ENST00000534062 CLEC4EQ9ULY5 219 aa9.67□□□□□ -0.86
RTL1-201ENST00000534062 WASH4PA8MWX3 477 aa9.66□□□□□ -0.86
RTL1-201ENST00000534062 E2F6O75461 281 aa9.66□□□□□ -0.86
RTL1-201ENST00000534062 DDX6P26196 483 aaKnown RBP eCLIP9.66□□□□□ -0.86
RTL1-201ENST00000534062 TMPRSS15P98073 1019 aa9.66□□□□□ -0.86
RTL1-201ENST00000534062 CDK16Q00536 496 aa9.66□□□□□ -0.86
RTL1-201ENST00000534062 LSAMPQ13449 338 aa9.66□□□□□ -0.86
RTL1-201ENST00000534062 TSNAXIP1Q2TAA8 658 aa9.66□□□□□ -0.86
RTL1-201ENST00000534062 ATXN7L2Q5T6C5 722 aaPredicted RBP9.66□□□□□ -0.86
RTL1-201ENST00000534062 TTC39BQ5VTQ0 682 aaPredicted RBP9.66□□□□□ -0.86
RTL1-201ENST00000534062 LINC00523Q86TU6 105 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms