RNA–Protein interactions for RNA: ENST00000534049.5

ITGB1-219, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-219ENST00000534049 SH3TC1Q8TE82 1336 aa4.45□□□□□ -1.7
ITGB1-219ENST00000534049 RTL1A6NKG5 1358 aa4.44□□□□□ -1.7
ITGB1-219ENST00000534049 A0A1W2PPC4 97 aa4.44□□□□□ -1.7
ITGB1-219ENST00000534049 POM121BA6NF01 834 aa4.44□□□□□ -1.7
ITGB1-219ENST00000534049 M0QX08 132 aa4.44□□□□□ -1.7
ITGB1-219ENST00000534049 TSPAN1O60635 241 aa4.44□□□□□ -1.7
ITGB1-219ENST00000534049 FLOT1O75955 427 aa4.44□□□□□ -1.7
ITGB1-219ENST00000534049 LDHCP07864 332 aa4.44□□□□□ -1.7
ITGB1-219ENST00000534049 GSTA2P09210 222 aa4.44□□□□□ -1.7
ITGB1-219ENST00000534049 CPA3P15088 417 aa4.44□□□□□ -1.7
ITGB1-219ENST00000534049 TFEBP19484 476 aa4.44□□□□□ -1.7
ITGB1-219ENST00000534049 FGFR2P21802 821 aa4.44□□□□□ -1.7
ITGB1-219ENST00000534049 RPS6KB1P23443 525 aa4.44□□□□□ -1.7
ITGB1-219ENST00000534049 MST1P26927 711 aa4.44□□□□□ -1.7
ITGB1-219ENST00000534049 HOXD9P28356 352 aaPredicted RBP4.44□□□□□ -1.7
ITGB1-219ENST00000534049 HOXD12P35452 270 aa4.44□□□□□ -1.7
ITGB1-219ENST00000534049 KRT9P35527 623 aa4.44□□□□□ -1.7
ITGB1-219ENST00000534049 MLH1P40692 756 aa4.44□□□□□ -1.7
ITGB1-219ENST00000534049 SERPINB8P50452 374 aa4.44□□□□□ -1.7
ITGB1-219ENST00000534049 BLVRAP53004 296 aa4.44□□□□□ -1.7
ITGB1-219ENST00000534049 YPEL5P62699 121 aa4.44□□□□□ -1.7
ITGB1-219ENST00000534049 RIPK1Q13546 671 aa4.44□□□□□ -1.7
ITGB1-219ENST00000534049 FHL1Q13642 323 aa4.44□□□□□ -1.7
ITGB1-219ENST00000534049 TNIP1Q15025 636 aa4.44□□□□□ -1.7
ITGB1-219ENST00000534049 WDR43Q15061 677 aaKnown RBP eCLIP4.44□□□□□ -1.7
ITGB1-219ENST00000534049 SGSM1Q2NKQ1 1148 aa4.44□□□□□ -1.7
ITGB1-219ENST00000534049 PLEKHO1Q53GL0 409 aaPredicted RBP4.44□□□□□ -1.7
ITGB1-219ENST00000534049 SMUG1Q53HV7 270 aa4.44□□□□□ -1.7
ITGB1-219ENST00000534049 SPATA1Q5VX52 437 aa4.44□□□□□ -1.7
ITGB1-219ENST00000534049 NEPROQ6NW34 567 aa4.44□□□□□ -1.7
ITGB1-219ENST00000534049 ZNF517Q6ZMY9 492 aaPredicted RBP4.44□□□□□ -1.7
ITGB1-219ENST00000534049 ZNF793Q6ZN11 406 aa4.44□□□□□ -1.7
ITGB1-219ENST00000534049 BZW1Q7L1Q6 419 aaKnown RBP4.44□□□□□ -1.7
ITGB1-219ENST00000534049 DEFB132Q7Z7B7 95 aa4.44□□□□□ -1.7
ITGB1-219ENST00000534049 SYCP3Q8IZU3 236 aa4.44□□□□□ -1.7
ITGB1-219ENST00000534049 CARNMT1Q8N4J0 409 aa4.44□□□□□ -1.7
ITGB1-219ENST00000534049 AFAP1L1Q8TED9 768 aa4.44□□□□□ -1.7
ITGB1-219ENST00000534049 ZFPM2Q8WW38 1151 aa4.44□□□□□ -1.7
ITGB1-219ENST00000534049 MAIP1Q8WWC4 291 aa4.44□□□□□ -1.7
ITGB1-219ENST00000534049 PIGKQ92643 395 aa4.44□□□□□ -1.7
ITGB1-219ENST00000534049 TIFAQ96CG3 184 aa4.44□□□□□ -1.7
ITGB1-219ENST00000534049 CFAP36Q96G28 342 aa4.44□□□□□ -1.7
ITGB1-219ENST00000534049 GDAP1L1Q96MZ0 367 aa4.44□□□□□ -1.7
ITGB1-219ENST00000534049 NEUROD6Q96NK8 337 aa4.44□□□□□ -1.7
ITGB1-219ENST00000534049 FCRL5Q96RD9 977 aa4.44□□□□□ -1.7
ITGB1-219ENST00000534049 RPS6KC1Q96S38 1066 aa4.44□□□□□ -1.7
ITGB1-219ENST00000534049 APOL5Q9BWW9 433 aa4.44□□□□□ -1.7
ITGB1-219ENST00000534049 FAM192AQ9GZU8 254 aa4.44□□□□□ -1.7
ITGB1-219ENST00000534049 MIS12Q9H081 205 aa4.44□□□□□ -1.7
ITGB1-219ENST00000534049 NSRP1Q9H0G5 558 aaKnown RBP4.44□□□□□ -1.7
ITGB1-219ENST00000534049 SIL1Q9H173 461 aa4.44□□□□□ -1.7
ITGB1-219ENST00000534049 FOXP1Q9H334 677 aaPredicted RBP4.44□□□□□ -1.7
ITGB1-219ENST00000534049 GOLPH3LQ9H4A5 285 aa4.44□□□□□ -1.7
ITGB1-219ENST00000534049 VCPKMTQ9H867 229 aa4.44□□□□□ -1.7
ITGB1-219ENST00000534049 STARD7Q9NQZ5 370 aa4.44□□□□□ -1.7
ITGB1-219ENST00000534049 ABHD10Q9NUJ1 306 aa4.44□□□□□ -1.7
ITGB1-219ENST00000534049 AATFQ9NY61 560 aaKnown RBP eCLIP4.44□□□□□ -1.72e-7■□□□□ 10.9
ITGB1-219ENST00000534049 NDUFA13Q9P0J0 144 aa4.44□□□□□ -1.7
ITGB1-219ENST00000534049 VPS18Q9P253 973 aa4.44□□□□□ -1.7
ITGB1-219ENST00000534049 WDR35Q9P2L0 1181 aa4.44□□□□□ -1.7
ITGB1-219ENST00000534049 CTNNAL1Q9UBT7 734 aa4.44□□□□□ -1.7
ITGB1-219ENST00000534049 EXOC6BQ9Y2D4 811 aa4.44□□□□□ -1.7
ITGB1-219ENST00000534049 R3HDM2Q9Y2K5 976 aaKnown RBP4.44□□□□□ -1.7
ITGB1-219ENST00000534049 COL18A1P39060 1754 aa4.44□□□□□ -1.7
ITGB1-219ENST00000534049 AKAP12Q02952 1782 aa4.44□□□□□ -1.7
ITGB1-219ENST00000534049 HTR3EA5X5Y0 456 aa4.43□□□□□ -1.7
ITGB1-219ENST00000534049 OR2W5A6NFC9 320 aa4.43□□□□□ -1.7
ITGB1-219ENST00000534049 F8W810 466 aa4.43□□□□□ -1.7
ITGB1-219ENST00000534049 TRIM38O00635 465 aa4.43□□□□□ -1.7
ITGB1-219ENST00000534049 CPLX1O14810 134 aa4.43□□□□□ -1.7
ITGB1-219ENST00000534049 PFDN1O60925 122 aa4.43□□□□□ -1.7
ITGB1-219ENST00000534049 CBFA2T3O75081 653 aa4.43□□□□□ -1.7
ITGB1-219ENST00000534049 YEATS4O95619 227 aa4.43□□□□□ -1.7
ITGB1-219ENST00000534049 NTN1O95631 604 aa4.43□□□□□ -1.7
ITGB1-219ENST00000534049 RPN1P04843 607 aaKnown RBP4.43□□□□□ -1.7
ITGB1-219ENST00000534049 S100A6P06703 90 aa4.43□□□□□ -1.7
ITGB1-219ENST00000534049 ARP10275 920 aa4.43□□□□□ -1.7
ITGB1-219ENST00000534049 TSHRP16473 764 aa4.43□□□□□ -1.7
ITGB1-219ENST00000534049 MX1P20591 662 aa4.43□□□□□ -1.7
ITGB1-219ENST00000534049 SYT1P21579 422 aa4.43□□□□□ -1.7
ITGB1-219ENST00000534049 DRD1P21728 446 aa4.43□□□□□ -1.7
ITGB1-219ENST00000534049 ATP5DP30049 168 aa4.43□□□□□ -1.7
ITGB1-219ENST00000534049 IGHMBP2P38935 993 aaKnown RBP4.43□□□□□ -1.7
ITGB1-219ENST00000534049 PIK3CBP42338 1070 aa4.43□□□□□ -1.7
ITGB1-219ENST00000534049 GNAQP50148 359 aa4.43□□□□□ -1.7
ITGB1-219ENST00000534049 CASP5P51878 434 aa4.43□□□□□ -1.7
ITGB1-219ENST00000534049 GSDMDP57764 484 aa4.43□□□□□ -1.7
ITGB1-219ENST00000534049 RAE1P78406 368 aaKnown RBP4.43□□□□□ -1.7
ITGB1-219ENST00000534049 B4GALNT1Q00973 533 aa4.43□□□□□ -1.7
ITGB1-219ENST00000534049 ACTN3Q08043 901 aaPredicted RBP4.43□□□□□ -1.7
ITGB1-219ENST00000534049 KIF5AQ12840 1032 aa4.43□□□□□ -1.7
ITGB1-219ENST00000534049 ATP1A4Q13733 1029 aa4.43□□□□□ -1.7
ITGB1-219ENST00000534049 RAPGEF1Q13905 1077 aa4.43□□□□□ -1.7
ITGB1-219ENST00000534049 CBFBQ13951 182 aa4.43□□□□□ -1.7
ITGB1-219ENST00000534049 DPYSQ14117 519 aa4.43□□□□□ -1.7
ITGB1-219ENST00000534049 NONOQ15233 471 aaKnown RBP eCLIP4.43□□□□□ -1.71e-8■■■□□ 16.8
ITGB1-219ENST00000534049 TAF11Q15544 211 aa4.43□□□□□ -1.7
ITGB1-219ENST00000534049 BCL2A1Q16548 175 aa4.43□□□□□ -1.7
ITGB1-219ENST00000534049 EARS2Q5JPH6 523 aaKnown RBP4.43□□□□□ -1.7
ITGB1-219ENST00000534049 EEF1AKMT2Q5JPI9 291 aaKnown RBP4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms