RNA–Protein interactions for RNA: ENST00000533704.1

CAPN1-225, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 643 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-225ENST00000533704 HNRNPKP61978 463 aaKnown RBP eCLIP10.54□□□□□ -0.72
CAPN1-225ENST00000533704 IL10RBQ08334 325 aa10.54□□□□□ -0.72
CAPN1-225ENST00000533704 ELP6Q0PNE2 266 aa10.54□□□□□ -0.72
CAPN1-225ENST00000533704 FZD2Q14332 565 aa10.54□□□□□ -0.72
CAPN1-225ENST00000533704 ZNF235Q14590 738 aa10.54□□□□□ -0.72
CAPN1-225ENST00000533704 GRM3Q14832 879 aa10.54□□□□□ -0.72
CAPN1-225ENST00000533704 ACAP1Q15027 740 aa10.54□□□□□ -0.72
CAPN1-225ENST00000533704 DPYSL2Q16555 572 aa10.54□□□□□ -0.72
CAPN1-225ENST00000533704 BOLA3Q53S33 107 aa10.54□□□□□ -0.72
CAPN1-225ENST00000533704 TPRG1LQ5T0D9 272 aa10.54□□□□□ -0.72
CAPN1-225ENST00000533704 HES3Q5TGS1 186 aa10.54□□□□□ -0.72
CAPN1-225ENST00000533704 AFMIDQ63HM1 303 aa10.54□□□□□ -0.72
CAPN1-225ENST00000533704 ERAP2Q6P179 960 aa10.54□□□□□ -0.72
CAPN1-225ENST00000533704 PARGQ86W56 976 aa10.54□□□□□ -0.72
CAPN1-225ENST00000533704 DCP2Q8IU60 420 aaKnown RBP10.54□□□□□ -0.72
CAPN1-225ENST00000533704 RNF214Q8ND24 703 aa10.54□□□□□ -0.72
CAPN1-225ENST00000533704 DENND6BQ8NEG7 585 aa10.54□□□□□ -0.72
CAPN1-225ENST00000533704 OR4C6Q8NH72 309 aa10.54□□□□□ -0.72
CAPN1-225ENST00000533704 ZNF564Q8TBZ8 553 aaPredicted RBP10.54□□□□□ -0.72
CAPN1-225ENST00000533704 LENG8Q96PV6 779 aaPredicted RBP10.54□□□□□ -0.72
CAPN1-225ENST00000533704 TSPY26PQ9H489 355 aa10.54□□□□□ -0.72
CAPN1-225ENST00000533704 DEF6Q9H4E7 631 aa10.54□□□□□ -0.72
CAPN1-225ENST00000533704 PCDH12Q9NPG4 1184 aa10.54□□□□□ -0.72
CAPN1-225ENST00000533704 ETNK2Q9NVF9 386 aa10.54□□□□□ -0.72
CAPN1-225ENST00000533704 CTTNBP2NLQ9P2B4 639 aa10.54□□□□□ -0.72
CAPN1-225ENST00000533704 PCDHGA1Q9Y5H4 931 aa10.54□□□□□ -0.72
CAPN1-225ENST00000533704 LRP4O75096 1905 aa10.54□□□□□ -0.72
CAPN1-225ENST00000533704 CHD6Q8TD26 2715 aa10.54□□□□□ -0.72
CAPN1-225ENST00000533704 SPTY2D1-AS1A0A0U1RR47 76 aa10.53□□□□□ -0.72
CAPN1-225ENST00000533704 TTC24A2A3L6 582 aaPredicted RBP10.53□□□□□ -0.72
CAPN1-225ENST00000533704 NEMP2A6NFY4 417 aa10.53□□□□□ -0.72
CAPN1-225ENST00000533704 TMEM110-MUSTN1A8MSY1 372 aa10.53□□□□□ -0.72
CAPN1-225ENST00000533704 A8MX80 341 aa10.53□□□□□ -0.72
CAPN1-225ENST00000533704 MYO1FO00160 1098 aa10.53□□□□□ -0.72
CAPN1-225ENST00000533704 CBFA2T2O43439 604 aa10.53□□□□□ -0.72
CAPN1-225ENST00000533704 C1SP09871 688 aa10.53□□□□□ -0.72
CAPN1-225ENST00000533704 C6P13671 934 aa10.53□□□□□ -0.72
CAPN1-225ENST00000533704 CDH6P55285 790 aa10.53□□□□□ -0.72
CAPN1-225ENST00000533704 BCL2L1Q07817 233 aa10.53□□□□□ -0.72
CAPN1-225ENST00000533704 CYP4F3Q08477 520 aa10.53□□□□□ -0.72
CAPN1-225ENST00000533704 SLC10A7Q0GE19 358 aa10.53□□□□□ -0.72
CAPN1-225ENST00000533704 ZNF211Q13398 564 aaPredicted RBP10.53□□□□□ -0.72
CAPN1-225ENST00000533704 LBRQ14739 615 aaKnown RBP10.53□□□□□ -0.72
CAPN1-225ENST00000533704 IRF4Q15306 451 aa10.53□□□□□ -0.72
CAPN1-225ENST00000533704 TCEA2Q15560 299 aa10.53□□□□□ -0.72
CAPN1-225ENST00000533704 SMAD1Q15797 465 aaKnown RBP10.53□□□□□ -0.72
CAPN1-225ENST00000533704 HADHQ16836 314 aaKnown RBP10.53□□□□□ -0.72
CAPN1-225ENST00000533704 UGP2Q16851 508 aa10.53□□□□□ -0.72
CAPN1-225ENST00000533704 TSR1Q2NL82 804 aaKnown RBP10.53□□□□□ -0.72
CAPN1-225ENST00000533704 PROX2Q3B8N5 592 aa10.53□□□□□ -0.72
CAPN1-225ENST00000533704 TMEM52BQ4KMG9 183 aa10.53□□□□□ -0.72
CAPN1-225ENST00000533704 ZFYVE27Q5T4F4 411 aa10.53□□□□□ -0.72
CAPN1-225ENST00000533704 TMCO4Q5TGY1 634 aa10.53□□□□□ -0.72
CAPN1-225ENST00000533704 POLNQ7Z5Q5 900 aa10.53□□□□□ -0.72
CAPN1-225ENST00000533704 ZSWIM9Q86XI8 627 aa10.53□□□□□ -0.72
CAPN1-225ENST00000533704 RBFAQ8N0V3 343 aa10.53□□□□□ -0.72
CAPN1-225ENST00000533704 ATPAF2Q8N5M1 289 aa10.53□□□□□ -0.72
CAPN1-225ENST00000533704 LZTR1Q8N653 840 aa10.53□□□□□ -0.72
CAPN1-225ENST00000533704 ZNF548Q8NEK5 533 aaPredicted RBP10.53□□□□□ -0.72
CAPN1-225ENST00000533704 LMX1AQ8TE12 382 aa10.53□□□□□ -0.72
CAPN1-225ENST00000533704 TEKT4Q8WW24 435 aa10.53□□□□□ -0.72
CAPN1-225ENST00000533704 ASB12Q8WXK4 309 aa10.53□□□□□ -0.72
CAPN1-225ENST00000533704 TSC1Q92574 1164 aa10.53□□□□□ -0.72
CAPN1-225ENST00000533704 IFT43Q96FT9 208 aa10.53□□□□□ -0.72
CAPN1-225ENST00000533704 ZNF641Q96N77 438 aaPredicted RBP10.53□□□□□ -0.72
CAPN1-225ENST00000533704 CSPG4P5Q96PW8 444 aa10.53□□□□□ -0.72
CAPN1-225ENST00000533704 TUBGCP5Q96RT8 1024 aa10.53□□□□□ -0.72
CAPN1-225ENST00000533704 PCDH18Q9HCL0 1135 aa10.53□□□□□ -0.72
CAPN1-225ENST00000533704 MBNL1Q9NR56 388 aaKnown RBP10.53□□□□□ -0.72
CAPN1-225ENST00000533704 SEPT3Q9UH03 358 aa10.53□□□□□ -0.72
CAPN1-225ENST00000533704 KLF15Q9UIH9 416 aa10.53□□□□□ -0.72
CAPN1-225ENST00000533704 RALYQ9UKM9 306 aaKnown RBP10.53□□□□□ -0.72
CAPN1-225ENST00000533704 ATP8A1Q9Y2Q0 1164 aa10.53□□□□□ -0.72
CAPN1-225ENST00000533704 ADAMTS20P59510 1910 aa10.52□□□□□ -0.72
CAPN1-225ENST00000533704 TSPAN11A1L157 253 aa10.52□□□□□ -0.73
CAPN1-225ENST00000533704 RIOK3O14730 519 aaKnown RBP10.52□□□□□ -0.73
CAPN1-225ENST00000533704 SCAMP1O15126 338 aa10.52□□□□□ -0.73
CAPN1-225ENST00000533704 MUSKO15146 869 aa10.52□□□□□ -0.73
CAPN1-225ENST00000533704 CSF2P04141 144 aa10.52□□□□□ -0.73
CAPN1-225ENST00000533704 PCCBP05166 539 aa10.52□□□□□ -0.73
CAPN1-225ENST00000533704 CD48P09326 243 aa10.52□□□□□ -0.73
CAPN1-225ENST00000533704 TPM1P09493 284 aa10.52□□□□□ -0.73
CAPN1-225ENST00000533704 CDK4P11802 303 aa10.52□□□□□ -0.73
CAPN1-225ENST00000533704 NME1P15531 152 aaKnown RBP10.52□□□□□ -0.73
CAPN1-225ENST00000533704 SERPINB6P35237 376 aa10.52□□□□□ -0.73
CAPN1-225ENST00000533704 CSNK1DP48730 415 aa10.52□□□□□ -0.73
CAPN1-225ENST00000533704 LIG3P49916 1009 aa10.52□□□□□ -0.73
CAPN1-225ENST00000533704 RENBPP51606 427 aa10.52□□□□□ -0.73
CAPN1-225ENST00000533704 SUOXP51687 545 aa10.52□□□□□ -0.73
CAPN1-225ENST00000533704 PFN3P60673 137 aa10.52□□□□□ -0.73
CAPN1-225ENST00000533704 SLC25A11Q02978 314 aaKnown RBP10.52□□□□□ -0.73
CAPN1-225ENST00000533704 EIF2B5Q13144 721 aaKnown RBP10.52□□□□□ -0.73
CAPN1-225ENST00000533704 TARDBPQ13148 414 aaKnown RBP eCLIP10.52□□□□□ -0.73
CAPN1-225ENST00000533704 MMRN1Q13201 1228 aa10.52□□□□□ -0.73
CAPN1-225ENST00000533704 C1orf61Q13536 156 aa10.52□□□□□ -0.73
CAPN1-225ENST00000533704 PTK2BQ14289 1009 aa10.52□□□□□ -0.73
CAPN1-225ENST00000533704 RFTN1Q14699 578 aaPredicted RBP10.52□□□□□ -0.73
CAPN1-225ENST00000533704 LRRC14Q15048 493 aa10.52□□□□□ -0.73
CAPN1-225ENST00000533704 DEFB133Q30KQ1 61 aa10.52□□□□□ -0.73
CAPN1-225ENST00000533704 FAXCQ5TGI0 409 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms