RNA–Protein interactions for RNA: ENST00000533244.5

CCS-208, Transcript of copper chaperone for superoxide dismutase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCS, Length 1,430 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-208ENST00000533244 DCDC2BA2VCK2 349 aa20.63■□□□□ 0.89
CCS-208ENST00000533244 HTRA2O43464 458 aaPredicted RBP20.63■□□□□ 0.89
CCS-208ENST00000533244 OPHN1O60890 802 aa20.63■□□□□ 0.89
CCS-208ENST00000533244 SOCS5O75159 536 aa20.63■□□□□ 0.89
CCS-208ENST00000533244 ZRANB2O95218 330 aaKnown RBP eCLIP20.63■□□□□ 0.89
CCS-208ENST00000533244 ZNF883P0CG24 379 aa20.63■□□□□ 0.89
CCS-208ENST00000533244 HNRNPA2B1P22626 353 aaKnown RBP20.63■□□□□ 0.89
CCS-208ENST00000533244 CTNNA2P26232 953 aa20.63■□□□□ 0.89
CCS-208ENST00000533244 MAXP61244 160 aa20.63■□□□□ 0.89
CCS-208ENST00000533244 OVGP1Q12889 678 aa20.63■□□□□ 0.89
CCS-208ENST00000533244 SLC14A1Q13336 389 aa20.63■□□□□ 0.89
CCS-208ENST00000533244 ZNF423Q2M1K9 1284 aa20.63■□□□□ 0.89
CCS-208ENST00000533244 HLA-BQ31612 363 aa20.63■□□□□ 0.89
CCS-208ENST00000533244 TMEM52BQ4KMG9 183 aa20.63■□□□□ 0.89
CCS-208ENST00000533244 LRRC73Q5JTD7 316 aa20.63■□□□□ 0.89
CCS-208ENST00000533244 ADAT2Q7Z6V5 191 aaKnown RBP20.63■□□□□ 0.89
CCS-208ENST00000533244 CCDC13Q8IYE1 715 aa20.63■□□□□ 0.89
CCS-208ENST00000533244 RCOR2Q8IZ40 523 aa20.63■□□□□ 0.89
CCS-208ENST00000533244 KIAA1524Q8TCG1 905 aa20.63■□□□□ 0.89
CCS-208ENST00000533244 RBM41Q96IZ5 413 aaKnown RBP20.63■□□□□ 0.89
CCS-208ENST00000533244 ZNF830Q96NB3 372 aaPredicted RBP20.63■□□□□ 0.89
CCS-208ENST00000533244 SLC17A9Q9BYT1 436 aa20.63■□□□□ 0.89
CCS-208ENST00000533244 GAREM1Q9H706 876 aa20.63■□□□□ 0.89
CCS-208ENST00000533244 IL21RQ9HBE5 538 aa20.63■□□□□ 0.89
CCS-208ENST00000533244 NOD2Q9HC29 1040 aa20.63■□□□□ 0.89
CCS-208ENST00000533244 HEY1Q9Y5J3 304 aa20.63■□□□□ 0.89
CCS-208ENST00000533244 ADGRG1Q9Y653 693 aa20.63■□□□□ 0.89
CCS-208ENST00000533244 TMEM131Q92545 1883 aa20.63■□□□□ 0.89
CCS-208ENST00000533244 TTC24A2A3L6 582 aaPredicted RBP20.62■□□□□ 0.89
CCS-208ENST00000533244 SLC31A1O15431 190 aa20.62■□□□□ 0.89
CCS-208ENST00000533244 ARHGAP6O43182 974 aa20.62■□□□□ 0.89
CCS-208ENST00000533244 KRT10P13645 584 aa20.62■□□□□ 0.89
CCS-208ENST00000533244 ITIH2P19823 946 aa20.62■□□□□ 0.89
CCS-208ENST00000533244 NAP1L1P55209 391 aaKnown RBP20.62■□□□□ 0.89
CCS-208ENST00000533244 ELP6Q0PNE2 266 aa20.62■□□□□ 0.89
CCS-208ENST00000533244 TFDP2Q14188 446 aa20.62■□□□□ 0.89
CCS-208ENST00000533244 PPP2R5EQ16537 467 aa20.62■□□□□ 0.89
CCS-208ENST00000533244 UAP1L1Q3KQV9 507 aa20.62■□□□□ 0.89
CCS-208ENST00000533244 SLC45A4Q5BKX6 768 aa20.62■□□□□ 0.89
CCS-208ENST00000533244 TFDP3Q5H9I0 405 aa20.62■□□□□ 0.89
CCS-208ENST00000533244 NPNTQ6UXI9 565 aa20.62■□□□□ 0.89
CCS-208ENST00000533244 DGLUCYQ7Z3D6 616 aa20.62■□□□□ 0.89
CCS-208ENST00000533244 LRRN4Q8WUT4 740 aa20.62■□□□□ 0.89
CCS-208ENST00000533244 SKA1Q96BD8 255 aa20.62■□□□□ 0.89
CCS-208ENST00000533244 LENG8Q96PV6 779 aaPredicted RBP20.62■□□□□ 0.89
CCS-208ENST00000533244 LGMNQ99538 433 aa20.62■□□□□ 0.89
CCS-208ENST00000533244 NT5MQ9NPB1 228 aa20.62■□□□□ 0.89
CCS-208ENST00000533244 PCDH12Q9NPG4 1184 aa20.62■□□□□ 0.89
CCS-208ENST00000533244 SCUBE2Q9NQ36 999 aa20.62■□□□□ 0.89
CCS-208ENST00000533244 FNDC3AQ9Y2H6 1198 aaKnown RBP20.62■□□□□ 0.89
CCS-208ENST00000533244 IGLON5A6NGN9 336 aa20.61■□□□□ 0.89
CCS-208ENST00000533244 NEMP1O14524 444 aa20.61■□□□□ 0.89
CCS-208ENST00000533244 RIOK3O14730 519 aaKnown RBP20.61■□□□□ 0.89
CCS-208ENST00000533244 CD59P13987 128 aa20.61■□□□□ 0.89
CCS-208ENST00000533244 CCNB1P14635 433 aa20.61■□□□□ 0.89
CCS-208ENST00000533244 AKT2P31751 481 aa20.61■□□□□ 0.89
CCS-208ENST00000533244 MMP12P39900 470 aa20.61■□□□□ 0.89
CCS-208ENST00000533244 PEX5P50542 639 aa20.61■□□□□ 0.89
CCS-208ENST00000533244 C21orf59P57076 290 aa20.61■□□□□ 0.89
CCS-208ENST00000533244 NXPH1P58417 271 aa20.61■□□□□ 0.89
CCS-208ENST00000533244 IFI35P80217 286 aaPredicted RBP20.61■□□□□ 0.89
CCS-208ENST00000533244 ADCY2Q08462 1091 aa20.61■□□□□ 0.89
CCS-208ENST00000533244 STAT4Q14765 748 aa20.61■□□□□ 0.89
CCS-208ENST00000533244 PDK1Q15118 436 aa20.61■□□□□ 0.89
CCS-208ENST00000533244 CFAP58Q5T655 872 aa20.61■□□□□ 0.89
CCS-208ENST00000533244 GCNT7Q6ZNI0 430 aa20.61■□□□□ 0.89
CCS-208ENST00000533244 ABI3BPQ7Z7G0 1075 aa20.61■□□□□ 0.89
CCS-208ENST00000533244 PIP4P1Q86T03 277 aa20.61■□□□□ 0.89
CCS-208ENST00000533244 NT5DC3Q86UY8 548 aa20.61■□□□□ 0.89
CCS-208ENST00000533244 CCNYQ8ND76 341 aa20.61■□□□□ 0.89
CCS-208ENST00000533244 KLF6Q99612 283 aaPredicted RBP20.61■□□□□ 0.89
CCS-208ENST00000533244 IL12RB2Q99665 862 aa20.61■□□□□ 0.89
CCS-208ENST00000533244 POLR1EQ9GZS1 481 aaKnown RBP20.61■□□□□ 0.89
CCS-208ENST00000533244 FZD3Q9NPG1 666 aa20.61■□□□□ 0.89
CCS-208ENST00000533244 CA5BQ9Y2D0 317 aa20.61■□□□□ 0.89
CCS-208ENST00000533244 ATP8A1Q9Y2Q0 1164 aa20.61■□□□□ 0.89
CCS-208ENST00000533244 A0A1W2PQ67 120 aa20.61■□□□□ 0.89
CCS-208ENST00000533244 MACROD2A1Z1Q3 448 aa20.61■□□□□ 0.89
CCS-208ENST00000533244 CCDC66A2RUB6 948 aa20.61■□□□□ 0.89
CCS-208ENST00000533244 TLR4O00206 839 aa20.61■□□□□ 0.89
CCS-208ENST00000533244 RAD51BO15315 384 aa20.61■□□□□ 0.89
CCS-208ENST00000533244 CST8O60676 142 aa20.61■□□□□ 0.89
CCS-208ENST00000533244 PAK4O96013 591 aaPredicted RBP20.61■□□□□ 0.89
CCS-208ENST00000533244 CSRP1P21291 193 aaKnown RBP20.61■□□□□ 0.89
CCS-208ENST00000533244 TGM2P21980 687 aa20.61■□□□□ 0.89
CCS-208ENST00000533244 NR2C2P49116 596 aa20.61■□□□□ 0.89
CCS-208ENST00000533244 COPS2P61201 443 aa20.61■□□□□ 0.89
CCS-208ENST00000533244 DYNLT1P63172 113 aa20.61■□□□□ 0.89
CCS-208ENST00000533244 TRAF2Q12933 501 aa20.61■□□□□ 0.89
CCS-208ENST00000533244 ERMP1Q7Z2K6 904 aa20.61■□□□□ 0.89
CCS-208ENST00000533244 LRRC8AQ8IWT6 810 aa20.61■□□□□ 0.89
CCS-208ENST00000533244 DENND6BQ8NEG7 585 aa20.61■□□□□ 0.89
CCS-208ENST00000533244 BRD8Q9H0E9 1235 aa20.61■□□□□ 0.89
CCS-208ENST00000533244 RBM22Q9NW64 420 aaKnown RBP eCLIP20.61■□□□□ 0.893e-16■■■■□ 21.2
CCS-208ENST00000533244 PCDHGC4Q9Y5F7 938 aa20.61■□□□□ 0.89
CCS-208ENST00000533244 HS3ST3A1Q9Y663 406 aa20.61■□□□□ 0.89
CCS-208ENST00000533244 CABIN1Q9Y6J0 2220 aa20.6■□□□□ 0.89
CCS-208ENST00000533244 H0Y8X5 98 aa20.6■□□□□ 0.89
CCS-208ENST00000533244 PPP1R12AO14974 1030 aaPredicted RBP20.6■□□□□ 0.89
CCS-208ENST00000533244 HLA-DQB2P05538 268 aa20.6■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms