RNA–Protein interactions for RNA: ENST00000533012.1

TRAPPC4-211, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-211ENST00000533012 DYNC1I1O14576 645 aa11.33□□□□□ -0.6
TRAPPC4-211ENST00000533012 HTRA2O43464 458 aaPredicted RBP11.33□□□□□ -0.6
TRAPPC4-211ENST00000533012 ANXA9O76027 345 aa11.33□□□□□ -0.6
TRAPPC4-211ENST00000533012 URI1O94763 535 aaPredicted RBP11.33□□□□□ -0.6
TRAPPC4-211ENST00000533012 RHOBTB1O94844 696 aa11.33□□□□□ -0.6
TRAPPC4-211ENST00000533012 PGLSO95336 258 aa11.33□□□□□ -0.6
TRAPPC4-211ENST00000533012 SEMA4FO95754 770 aa11.33□□□□□ -0.6
TRAPPC4-211ENST00000533012 IFNB1P01574 187 aa11.33□□□□□ -0.6
TRAPPC4-211ENST00000533012 MMP2P08253 660 aa11.33□□□□□ -0.6
TRAPPC4-211ENST00000533012 TBC1D3HP0C7X1 549 aa11.33□□□□□ -0.6
TRAPPC4-211ENST00000533012 NFKBIAP25963 317 aa11.33□□□□□ -0.6
TRAPPC4-211ENST00000533012 COILP38432 576 aaPredicted RBP11.33□□□□□ -0.6
TRAPPC4-211ENST00000533012 TNNT3P45378 269 aaPredicted RBP11.33□□□□□ -0.6
TRAPPC4-211ENST00000533012 KCNJ1P48048 391 aa11.33□□□□□ -0.6
TRAPPC4-211ENST00000533012 GDF10P55107 478 aa11.33□□□□□ -0.6
TRAPPC4-211ENST00000533012 RPL6Q02878 288 aaKnown RBP11.33□□□□□ -0.6
TRAPPC4-211ENST00000533012 TRAF2Q12933 501 aa11.33□□□□□ -0.6
TRAPPC4-211ENST00000533012 SLC14A2Q15849 920 aa11.33□□□□□ -0.6
TRAPPC4-211ENST00000533012 P3H1Q32P28 736 aa11.33□□□□□ -0.6
TRAPPC4-211ENST00000533012 SPDYCQ5MJ68 293 aa11.33□□□□□ -0.6
TRAPPC4-211ENST00000533012 PIP5KL1Q5T9C9 394 aa11.33□□□□□ -0.6
TRAPPC4-211ENST00000533012 AGBL4Q5VU57 503 aa11.33□□□□□ -0.6
TRAPPC4-211ENST00000533012 TBC1D3GQ6DHY5 549 aa11.33□□□□□ -0.6
TRAPPC4-211ENST00000533012 TBC1D3CQ6IPX1 549 aa11.33□□□□□ -0.6
TRAPPC4-211ENST00000533012 CCDC70Q6NSX1 233 aa11.33□□□□□ -0.6
TRAPPC4-211ENST00000533012 NEK5Q6P3R8 708 aa11.33□□□□□ -0.6
TRAPPC4-211ENST00000533012 PARS2Q7L3T8 475 aaKnown RBP11.33□□□□□ -0.6
TRAPPC4-211ENST00000533012 LPCAT2Q7L5N7 544 aa11.33□□□□□ -0.6
TRAPPC4-211ENST00000533012 MTERF4Q7Z6M4 381 aaKnown RBP11.33□□□□□ -0.6
TRAPPC4-211ENST00000533012 TBC1D3Q8IZP1 549 aaPredicted RBP11.33□□□□□ -0.6
TRAPPC4-211ENST00000533012 CADM4Q8NFZ8 388 aa11.33□□□□□ -0.6
TRAPPC4-211ENST00000533012 OR2T34Q8NGX1 318 aa11.33□□□□□ -0.6
TRAPPC4-211ENST00000533012 SPATA22Q8NHS9 363 aa11.33□□□□□ -0.6
TRAPPC4-211ENST00000533012 KIF18AQ8NI77 898 aa11.33□□□□□ -0.6
TRAPPC4-211ENST00000533012 FAM131CQ96AQ9 280 aa11.33□□□□□ -0.6
TRAPPC4-211ENST00000533012 ECHDC3Q96DC8 303 aa11.33□□□□□ -0.6
TRAPPC4-211ENST00000533012 RTP4Q96DX8 246 aa11.33□□□□□ -0.6
TRAPPC4-211ENST00000533012 IFT43Q96FT9 208 aa11.33□□□□□ -0.6
TRAPPC4-211ENST00000533012 FEM1CQ96JP0 617 aa11.33□□□□□ -0.6
TRAPPC4-211ENST00000533012 ADGRE3Q9BY15 652 aa11.33□□□□□ -0.6
TRAPPC4-211ENST00000533012 GBA3Q9H227 469 aa11.33□□□□□ -0.6
TRAPPC4-211ENST00000533012 PCDH9Q9HC56 1237 aa11.33□□□□□ -0.6
TRAPPC4-211ENST00000533012 VPS45Q9NRW7 570 aa11.33□□□□□ -0.6
TRAPPC4-211ENST00000533012 FAM153AQ9UHL3 310 aa11.33□□□□□ -0.6
TRAPPC4-211ENST00000533012 MBD1Q9UIS9 605 aaPredicted RBP11.33□□□□□ -0.6
TRAPPC4-211ENST00000533012 CHKBQ9Y259 395 aa11.33□□□□□ -0.6
TRAPPC4-211ENST00000533012 AAR2Q9Y312 384 aaKnown RBP11.33□□□□□ -0.6
TRAPPC4-211ENST00000533012 R4GN57 208 aa11.33□□□□□ -0.6
TRAPPC4-211ENST00000533012 GOLGA6CA6NDK9 693 aa11.32□□□□□ -0.6
TRAPPC4-211ENST00000533012 GOLGA6BA6NDN3 693 aa11.32□□□□□ -0.6
TRAPPC4-211ENST00000533012 UPK3BL1B0FP48 263 aa11.32□□□□□ -0.6
TRAPPC4-211ENST00000533012 UPK3BL2E5RIL1 263 aa11.32□□□□□ -0.6
TRAPPC4-211ENST00000533012 TSPAN6O43657 245 aa11.32□□□□□ -0.6
TRAPPC4-211ENST00000533012 PLRG1O43660 514 aaKnown RBP11.32□□□□□ -0.6
TRAPPC4-211ENST00000533012 AP1G1O43747 822 aa11.32□□□□□ -0.6
TRAPPC4-211ENST00000533012 FZD6O60353 706 aa11.32□□□□□ -0.6
TRAPPC4-211ENST00000533012 PHF2O75151 1096 aa11.32□□□□□ -0.6
TRAPPC4-211ENST00000533012 PMPCBO75439 489 aa11.32□□□□□ -0.6
TRAPPC4-211ENST00000533012 PCDH8O95206 1070 aa11.32□□□□□ -0.6
TRAPPC4-211ENST00000533012 MT-CYBP00156 380 aaPredicted RBP11.32□□□□□ -0.6
TRAPPC4-211ENST00000533012 CPP00450 1065 aa11.32□□□□□ -0.6
TRAPPC4-211ENST00000533012 GOLGA6DP0CG33 693 aa11.32□□□□□ -0.6
TRAPPC4-211ENST00000533012 BCKDHBP21953 392 aa11.32□□□□□ -0.6
TRAPPC4-211ENST00000533012 EPHB1P54762 984 aa11.32□□□□□ -0.6
TRAPPC4-211ENST00000533012 ADPRHP54922 357 aa11.32□□□□□ -0.6
TRAPPC4-211ENST00000533012 GEMP55040 296 aa11.32□□□□□ -0.6
TRAPPC4-211ENST00000533012 RPL26P61254 145 aaKnown RBP11.32□□□□□ -0.6
TRAPPC4-211ENST00000533012 FAM193AP78312 1265 aa11.32□□□□□ -0.6
TRAPPC4-211ENST00000533012 CDK18Q07002 472 aa11.32□□□□□ -0.6
TRAPPC4-211ENST00000533012 ELP6Q0PNE2 266 aa11.32□□□□□ -0.6
TRAPPC4-211ENST00000533012 MPP3Q13368 585 aa11.32□□□□□ -0.6
TRAPPC4-211ENST00000533012 TUBB2AQ13885 445 aa11.32□□□□□ -0.6
TRAPPC4-211ENST00000533012 IHHQ14623 411 aa11.32□□□□□ -0.6
TRAPPC4-211ENST00000533012 ELF2Q15723 593 aa11.32□□□□□ -0.6
TRAPPC4-211ENST00000533012 PCSK7Q16549 785 aa11.32□□□□□ -0.6
TRAPPC4-211ENST00000533012 ERAP2Q6P179 960 aa11.32□□□□□ -0.6
TRAPPC4-211ENST00000533012 CCDC137Q6PK04 289 aaKnown RBP11.32□□□□□ -0.6
TRAPPC4-211ENST00000533012 C4orf22Q6V702 233 aa11.32□□□□□ -0.6
TRAPPC4-211ENST00000533012 PRR23BQ6ZRT6 265 aa11.32□□□□□ -0.6
TRAPPC4-211ENST00000533012 KDELC2Q7Z4H8 507 aa11.32□□□□□ -0.6
TRAPPC4-211ENST00000533012 DEFB119Q8N690 84 aa11.32□□□□□ -0.6
TRAPPC4-211ENST00000533012 C12orf50Q8NA57 414 aaPredicted RBP11.32□□□□□ -0.6
TRAPPC4-211ENST00000533012 MYRIPQ8NFW9 859 aa11.32□□□□□ -0.6
TRAPPC4-211ENST00000533012 GRK7Q8WTQ7 553 aa11.32□□□□□ -0.6
TRAPPC4-211ENST00000533012 SPOCK2Q92563 424 aa11.32□□□□□ -0.6
TRAPPC4-211ENST00000533012 FOXJ1Q92949 421 aa11.32□□□□□ -0.6
TRAPPC4-211ENST00000533012 TADA1Q96BN2 335 aa11.32□□□□□ -0.6
TRAPPC4-211ENST00000533012 LRRC45Q96CN5 670 aa11.32□□□□□ -0.6
TRAPPC4-211ENST00000533012 ZC3H10Q96K80 434 aaKnown RBP11.32□□□□□ -0.6
TRAPPC4-211ENST00000533012 TUBB2BQ9BVA1 445 aa11.32□□□□□ -0.6
TRAPPC4-211ENST00000533012 TDRD1Q9BXT4 1180 aaKnown RBP11.32□□□□□ -0.6
TRAPPC4-211ENST00000533012 PCED1AQ9H1Q7 454 aa11.32□□□□□ -0.6
TRAPPC4-211ENST00000533012 DUSP15Q9H1R2 295 aaPredicted RBP11.32□□□□□ -0.6
TRAPPC4-211ENST00000533012 SEMA4AQ9H3S1 761 aa11.32□□□□□ -0.6
TRAPPC4-211ENST00000533012 PREBQ9HCU5 417 aa11.32□□□□□ -0.6
TRAPPC4-211ENST00000533012 GOLGA6AQ9NYA3 693 aa11.32□□□□□ -0.6
TRAPPC4-211ENST00000533012 UBP1Q9NZI7 540 aa11.32□□□□□ -0.6
TRAPPC4-211ENST00000533012 PAK5Q9P286 719 aa11.32□□□□□ -0.6
TRAPPC4-211ENST00000533012 RAB23Q9ULC3 237 aa11.32□□□□□ -0.6
TRAPPC4-211ENST00000533012 RPL26L1Q9UNX3 145 aaKnown RBP11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms