RNA–Protein interactions for RNA: ENST00000532566.3

PCDHA3-202, Transcript of protocadherin alpha 3, humanhuman

BASIC

Gene PCDHA3, Length 4,594 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3-202ENST00000532566 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP15.41■□□□□ 0.06
PCDHA3-202ENST00000532566 HJURPQ8NCD3 748 aaPredicted RBP15.41■□□□□ 0.06
PCDHA3-202ENST00000532566 RBM15BQ8NDT2 890 aaKnown RBP15.41■□□□□ 0.06
PCDHA3-202ENST00000532566 BRI3BPQ8WY22 251 aa15.41■□□□□ 0.06
PCDHA3-202ENST00000532566 PAPOLBQ9NRJ5 636 aaKnown RBP15.41■□□□□ 0.06
PCDHA3-202ENST00000532566 LIMD1Q9UGP4 676 aa15.41■□□□□ 0.06
PCDHA3-202ENST00000532566 MTF2Q9Y483 593 aaPredicted RBP15.41■□□□□ 0.06
PCDHA3-202ENST00000532566 AZIN1O14977 448 aa15.41■□□□□ 0.06
PCDHA3-202ENST00000532566 ZBTB14O43829 449 aa15.41■□□□□ 0.06
PCDHA3-202ENST00000532566 APOA1P02647 267 aa15.41■□□□□ 0.06
PCDHA3-202ENST00000532566 ATP6V1C1P21283 382 aa15.41■□□□□ 0.06
PCDHA3-202ENST00000532566 CDC25CP30307 473 aa15.41■□□□□ 0.06
PCDHA3-202ENST00000532566 NRLP54845 237 aa15.41■□□□□ 0.06
PCDHA3-202ENST00000532566 CDH13P55290 713 aa15.41■□□□□ 0.06
PCDHA3-202ENST00000532566 SNRPD1P62314 119 aaKnown RBP15.41■□□□□ 0.06
PCDHA3-202ENST00000532566 CNTN1Q12860 1018 aa15.41■□□□□ 0.06
PCDHA3-202ENST00000532566 PARP15Q460N3 678 aa15.41■□□□□ 0.06
PCDHA3-202ENST00000532566 ADAMTSL2Q86TH1 951 aa15.41■□□□□ 0.06
PCDHA3-202ENST00000532566 OTULINQ96BN8 352 aa15.41■□□□□ 0.06
PCDHA3-202ENST00000532566 BPIFA1Q9NP55 256 aa15.41■□□□□ 0.06
PCDHA3-202ENST00000532566 CHKBQ9Y259 395 aa15.41■□□□□ 0.06
PCDHA3-202ENST00000532566 H0YGN5 161 aa15.41■□□□□ 0.06
PCDHA3-202ENST00000532566 TBL1XO60907 577 aa15.41■□□□□ 0.06
PCDHA3-202ENST00000532566 ANXA5P08758 320 aa15.41■□□□□ 0.06
PCDHA3-202ENST00000532566 CYP2A6P11509 494 aaPredicted RBP15.41■□□□□ 0.06
PCDHA3-202ENST00000532566 KCNA10Q16322 511 aa15.41■□□□□ 0.06
PCDHA3-202ENST00000532566 METTL21CQ5VZV1 264 aa15.41■□□□□ 0.06
PCDHA3-202ENST00000532566 PGBD3Q8N328 593 aa15.41■□□□□ 0.06
PCDHA3-202ENST00000532566 TMPRSS4Q9NRS4 437 aa15.41■□□□□ 0.06
PCDHA3-202ENST00000532566 NFS1Q9Y697 457 aa15.41■□□□□ 0.06
PCDHA3-202ENST00000532566 MATN3O15232 486 aa15.41■□□□□ 0.06
PCDHA3-202ENST00000532566 ELNP15502 786 aa15.41■□□□□ 0.06
PCDHA3-202ENST00000532566 S100A3P33764 101 aa15.41■□□□□ 0.06
PCDHA3-202ENST00000532566 KIAA0408Q6ZU52 694 aa15.41■□□□□ 0.06
PCDHA3-202ENST00000532566 EFCAB3Q8N7B9 438 aa15.41■□□□□ 0.06
PCDHA3-202ENST00000532566 GSTCDQ8NEC7 633 aa15.41■□□□□ 0.06
PCDHA3-202ENST00000532566 TEKT5Q96M29 485 aa15.41■□□□□ 0.06
PCDHA3-202ENST00000532566 SLC25A51Q9H1U9 297 aa15.41■□□□□ 0.06
PCDHA3-202ENST00000532566 SEMA6AQ9H2E6 1030 aa15.41■□□□□ 0.06
PCDHA3-202ENST00000532566 ATP13A3Q9H7F0 1226 aa15.41■□□□□ 0.06
PCDHA3-202ENST00000532566 GNPTGQ9UJJ9 305 aa15.41■□□□□ 0.06
PCDHA3-202ENST00000532566 CLCA2Q9UQC9 943 aa15.41■□□□□ 0.06
PCDHA3-202ENST00000532566 PCDHB9Q9Y5E1 797 aa15.41■□□□□ 0.06
PCDHA3-202ENST00000532566 PDE4DIPQ5VU43 2346 aa15.41■□□□□ 0.06
PCDHA3-202ENST00000532566 TCRBV7S3A2A0A539 114 aa15.4■□□□□ 0.06
PCDHA3-202ENST00000532566 RGS20O76081 388 aa15.4■□□□□ 0.06
PCDHA3-202ENST00000532566 POLD2P49005 469 aa15.4■□□□□ 0.06
PCDHA3-202ENST00000532566 HPCAP84074 193 aa15.4■□□□□ 0.06
PCDHA3-202ENST00000532566 PPM1LQ5SGD2 360 aa15.4■□□□□ 0.06
PCDHA3-202ENST00000532566 FSTL4Q6MZW2 842 aa15.4■□□□□ 0.06
PCDHA3-202ENST00000532566 STK32CQ86UX6 486 aa15.4■□□□□ 0.06
PCDHA3-202ENST00000532566 SLC44A2Q8IWA5 706 aaPredicted RBP15.4■□□□□ 0.06
PCDHA3-202ENST00000532566 CFAP52Q8N1V2 620 aa15.4■□□□□ 0.06
PCDHA3-202ENST00000532566 NTAN1Q96AB6 310 aa15.4■□□□□ 0.06
PCDHA3-202ENST00000532566 MED8Q96G25 268 aa15.4■□□□□ 0.06
PCDHA3-202ENST00000532566 PLEKHA8Q96JA3 519 aa15.4■□□□□ 0.06
PCDHA3-202ENST00000532566 UGT2B28Q9BY64 529 aa15.4■□□□□ 0.06
PCDHA3-202ENST00000532566 A8MUI8 341 aa15.4■□□□□ 0.06
PCDHA3-202ENST00000532566 RNASEH1O60930 286 aaKnown RBP15.4■□□□□ 0.06
PCDHA3-202ENST00000532566 CLDN11O75508 207 aa15.4■□□□□ 0.06
PCDHA3-202ENST00000532566 GPC1P35052 558 aa15.4■□□□□ 0.06
PCDHA3-202ENST00000532566 CHI3L1P36222 383 aaPredicted RBP15.4■□□□□ 0.06
PCDHA3-202ENST00000532566 ATG16L2Q8NAA4 619 aa15.4■□□□□ 0.06
PCDHA3-202ENST00000532566 ZFRQ96KR1 1074 aaKnown RBP15.4■□□□□ 0.06
PCDHA3-202ENST00000532566 PCYT2Q99447 389 aa15.4■□□□□ 0.06
PCDHA3-202ENST00000532566 EXOSC4Q9NPD3 245 aaKnown RBP15.4■□□□□ 0.06
PCDHA3-202ENST00000532566 SH3BP4Q9P0V3 963 aa15.4■□□□□ 0.06
PCDHA3-202ENST00000532566 ZNF229Q9UJW7 825 aa15.4■□□□□ 0.06
PCDHA3-202ENST00000532566 TRAF6Q9Y4K3 522 aa15.4■□□□□ 0.06
PCDHA3-202ENST00000532566 IRS2Q9Y4H2 1338 aa15.4■□□□□ 0.06
PCDHA3-202ENST00000532566 PPEF2O14830 753 aa15.4■□□□□ 0.06
PCDHA3-202ENST00000532566 SEPT4O43236 478 aa15.4■□□□□ 0.06
PCDHA3-202ENST00000532566 TYMPP19971 482 aa15.4■□□□□ 0.06
PCDHA3-202ENST00000532566 S100A5P33763 92 aa15.4■□□□□ 0.06
PCDHA3-202ENST00000532566 GRIA3P42263 894 aa15.4■□□□□ 0.06
PCDHA3-202ENST00000532566 HSPA14Q0VDF9 509 aa15.4■□□□□ 0.06
PCDHA3-202ENST00000532566 CDC16Q13042 620 aa15.4■□□□□ 0.06
PCDHA3-202ENST00000532566 CLEC20AQ6ZU45 233 aa15.4■□□□□ 0.06
PCDHA3-202ENST00000532566 BBS7Q8IWZ6 715 aa15.4■□□□□ 0.06
PCDHA3-202ENST00000532566 DHRSXQ8N5I4 330 aa15.4■□□□□ 0.06
PCDHA3-202ENST00000532566 TRAPPC9Q96Q05 1148 aa15.4■□□□□ 0.06
PCDHA3-202ENST00000532566 GEMIN8Q9NWZ8 242 aaKnown RBP15.4■□□□□ 0.06
PCDHA3-202ENST00000532566 SPG21Q9NZD8 308 aa15.4■□□□□ 0.06
PCDHA3-202ENST00000532566 TMEM216Q9P0N5 145 aa15.4■□□□□ 0.06
PCDHA3-202ENST00000532566 ZNF711Q9Y462 761 aa15.4■□□□□ 0.06
PCDHA3-202ENST00000532566 TCAF1Q9Y4C2 921 aa15.4■□□□□ 0.06
PCDHA3-202ENST00000532566 C1orf232A0A0U1RR37 186 aa15.39■□□□□ 0.06
PCDHA3-202ENST00000532566 KPNA3O00505 521 aaPredicted RBP15.39■□□□□ 0.06
PCDHA3-202ENST00000532566 STK25O00506 426 aa15.39■□□□□ 0.06
PCDHA3-202ENST00000532566 TM7SF2O76062 418 aa15.39■□□□□ 0.06
PCDHA3-202ENST00000532566 MT-CYBP00156 380 aaPredicted RBP15.39■□□□□ 0.06
PCDHA3-202ENST00000532566 CDH5P33151 784 aaPredicted RBP15.39■□□□□ 0.06
PCDHA3-202ENST00000532566 GLUD2P49448 558 aa15.39■□□□□ 0.06
PCDHA3-202ENST00000532566 INCA1Q0VD86 236 aa15.39■□□□□ 0.06
PCDHA3-202ENST00000532566 RHBDF2Q6PJF5 856 aa15.39■□□□□ 0.06
PCDHA3-202ENST00000532566 TRMT11Q7Z4G4 463 aaKnown RBP15.39■□□□□ 0.06
PCDHA3-202ENST00000532566 CUZD1Q86UP6 607 aa15.39■□□□□ 0.06
PCDHA3-202ENST00000532566 CDYL2Q8N8U2 506 aa15.39■□□□□ 0.06
PCDHA3-202ENST00000532566 ITFG1Q8TB96 612 aa15.39■□□□□ 0.06
PCDHA3-202ENST00000532566 SLC35F5Q8WV83 523 aa15.39■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms