RNA–Protein interactions for RNA: ENST00000532029.6

LRRK1-208, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 1 (best) BASIC

Gene LRRK1, Length 1,241 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-208ENST00000532029 ANKRD20A3Q5VUR7 823 aa22.47■■□□□ 1.19
LRRK1-208ENST00000532029 TBC1D3GQ6DHY5 549 aa22.47■■□□□ 1.19
LRRK1-208ENST00000532029 TBC1D3CQ6IPX1 549 aa22.47■■□□□ 1.19
LRRK1-208ENST00000532029 NYAP1Q6ZVC0 841 aa22.47■■□□□ 1.19
LRRK1-208ENST00000532029 TBC1D3Q8IZP1 549 aaPredicted RBP22.47■■□□□ 1.19
LRRK1-208ENST00000532029 DEFB119Q8N690 84 aa22.47■■□□□ 1.19
LRRK1-208ENST00000532029 CADM4Q8NFZ8 388 aa22.47■■□□□ 1.19
LRRK1-208ENST00000532029 FOXJ1Q92949 421 aa22.47■■□□□ 1.19
LRRK1-208ENST00000532029 RBM15Q96T37 977 aaKnown RBP eCLIP22.47■■□□□ 1.19
LRRK1-208ENST00000532029 PREBQ9HCU5 417 aa22.47■■□□□ 1.19
LRRK1-208ENST00000532029 SMARCAL1Q9NZC9 954 aa22.47■■□□□ 1.19
LRRK1-208ENST00000532029 SMG5Q9UPR3 1016 aaKnown RBP22.47■■□□□ 1.19
LRRK1-208ENST00000532029 PCDHB9Q9Y5E1 797 aa22.47■■□□□ 1.19
LRRK1-208ENST00000532029 GOLGA6L10A0A0M3HER8 536 aa22.46■■□□□ 1.19
LRRK1-208ENST00000532029 C5orf60A6NFR6 353 aa22.46■■□□□ 1.19
LRRK1-208ENST00000532029 UPK3BL1B0FP48 263 aa22.46■■□□□ 1.19
LRRK1-208ENST00000532029 UPK3BL2E5RIL1 263 aa22.46■■□□□ 1.19
LRRK1-208ENST00000532029 NEMP1O14524 444 aa22.46■■□□□ 1.19
LRRK1-208ENST00000532029 ABL2P42684 1182 aa22.46■■□□□ 1.19
LRRK1-208ENST00000532029 UGP2Q16851 508 aa22.46■■□□□ 1.19
LRRK1-208ENST00000532029 ERAP2Q6P179 960 aa22.46■■□□□ 1.19
LRRK1-208ENST00000532029 DRICH1Q6PGQ1 229 aaPredicted RBP22.46■■□□□ 1.19
LRRK1-208ENST00000532029 PRELID2Q8N945 189 aa22.46■■□□□ 1.19
LRRK1-208ENST00000532029 CCDC110Q8TBZ0 833 aa22.46■■□□□ 1.19
LRRK1-208ENST00000532029 CAPZA3Q96KX2 299 aa22.46■■□□□ 1.19
LRRK1-208ENST00000532029 FCRL5Q96RD9 977 aa22.46■■□□□ 1.19
LRRK1-208ENST00000532029 AP1M1Q9BXS5 423 aa22.46■■□□□ 1.19
LRRK1-208ENST00000532029 TDRD1Q9BXT4 1180 aaKnown RBP22.46■■□□□ 1.19
LRRK1-208ENST00000532029 GBA3Q9H227 469 aa22.46■■□□□ 1.19
LRRK1-208ENST00000532029 C6orf106Q9H6K1 298 aaPredicted RBP22.46■■□□□ 1.19
LRRK1-208ENST00000532029 FADS3Q9Y5Q0 445 aa22.46■■□□□ 1.19
LRRK1-208ENST00000532029 FANCMQ8IYD8 2048 aa22.45■■□□□ 1.18
LRRK1-208ENST00000532029 MEI4A8MW99 385 aa22.45■■□□□ 1.18
LRRK1-208ENST00000532029 FANCGO15287 622 aa22.45■■□□□ 1.18
LRRK1-208ENST00000532029 AP1G1O43747 822 aa22.45■■□□□ 1.18
LRRK1-208ENST00000532029 FSBPO95073 299 aa22.45■■□□□ 1.18
LRRK1-208ENST00000532029 PCDH8O95206 1070 aa22.45■■□□□ 1.18
LRRK1-208ENST00000532029 PGLSO95336 258 aa22.45■■□□□ 1.18
LRRK1-208ENST00000532029 ITGAVP06756 1048 aa22.45■■□□□ 1.18
LRRK1-208ENST00000532029 MMP2P08253 660 aa22.45■■□□□ 1.18
LRRK1-208ENST00000532029 NFKBIAP25963 317 aa22.45■■□□□ 1.18
LRRK1-208ENST00000532029 TAS2R38P59533 333 aa22.45■■□□□ 1.18
LRRK1-208ENST00000532029 ELP6Q0PNE2 266 aa22.45■■□□□ 1.18
LRRK1-208ENST00000532029 PRPSAP1Q14558 356 aa22.45■■□□□ 1.18
LRRK1-208ENST00000532029 SLC14A2Q15849 920 aa22.45■■□□□ 1.18
LRRK1-208ENST00000532029 LRRC73Q5JTD7 316 aa22.45■■□□□ 1.18
LRRK1-208ENST00000532029 KIAA0895LQ68EN5 471 aa22.45■■□□□ 1.18
LRRK1-208ENST00000532029 ARHGEF18Q6ZSZ5 1173 aa22.45■■□□□ 1.18
LRRK1-208ENST00000532029 ARMCX6Q7L4S7 300 aa22.45■■□□□ 1.18
LRRK1-208ENST00000532029 PRPF39Q86UA1 669 aaKnown RBP22.45■■□□□ 1.18
LRRK1-208ENST00000532029 ZSWIM9Q86XI8 627 aa22.45■■□□□ 1.18
LRRK1-208ENST00000532029 NDUFAF2Q8N183 169 aa22.45■■□□□ 1.18
LRRK1-208ENST00000532029 HSPA12BQ96MM6 686 aa22.45■■□□□ 1.18
LRRK1-208ENST00000532029 PHOX2BQ99453 314 aa22.45■■□□□ 1.18
LRRK1-208ENST00000532029 PHTF1Q9UMS5 762 aa22.45■■□□□ 1.18
LRRK1-208ENST00000532029 DRG1Q9Y295 367 aaKnown RBP22.45■■□□□ 1.18
LRRK1-208ENST00000532029 F5H423 210 aaPredicted RBP22.44■■□□□ 1.18
LRRK1-208ENST00000532029 TSPAN6O43657 245 aa22.44■■□□□ 1.18
LRRK1-208ENST00000532029 ACTN2P35609 894 aa22.44■■□□□ 1.18
LRRK1-208ENST00000532029 EPHB1P54762 984 aa22.44■■□□□ 1.18
LRRK1-208ENST00000532029 GDF10P55107 478 aa22.44■■□□□ 1.18
LRRK1-208ENST00000532029 SYCP2LQ5T4T6 812 aa22.44■■□□□ 1.18
LRRK1-208ENST00000532029 LYSMD4Q5XG99 296 aa22.44■■□□□ 1.18
LRRK1-208ENST00000532029 NEK5Q6P3R8 708 aa22.44■■□□□ 1.18
LRRK1-208ENST00000532029 GSTA5Q7RTV2 222 aa22.44■■□□□ 1.18
LRRK1-208ENST00000532029 SPATA22Q8NHS9 363 aa22.44■■□□□ 1.18
LRRK1-208ENST00000532029 IFT43Q96FT9 208 aa22.44■■□□□ 1.18
LRRK1-208ENST00000532029 PPP1R2P1Q96PQ5 205 aa22.44■■□□□ 1.18
LRRK1-208ENST00000532029 PCDH9Q9HC56 1237 aa22.44■■□□□ 1.18
LRRK1-208ENST00000532029 PCDH12Q9NPG4 1184 aa22.44■■□□□ 1.18
LRRK1-208ENST00000532029 FAM153AQ9UHL3 310 aa22.44■■□□□ 1.18
LRRK1-208ENST00000532029 TPX2Q9ULW0 747 aaKnown RBP22.44■■□□□ 1.18
LRRK1-208ENST00000532029 CHKBQ9Y259 395 aa22.44■■□□□ 1.18
LRRK1-208ENST00000532029 METTL12A8MUP2 240 aa22.43■■□□□ 1.18
LRRK1-208ENST00000532029 FZD6O60353 706 aa22.43■■□□□ 1.18
LRRK1-208ENST00000532029 RNGTTO60942 597 aaKnown RBP22.43■■□□□ 1.18
LRRK1-208ENST00000532029 PMPCBO75439 489 aa22.43■■□□□ 1.18
LRRK1-208ENST00000532029 GCATO75600 419 aa22.43■■□□□ 1.18
LRRK1-208ENST00000532029 ANXA9O76027 345 aa22.43■■□□□ 1.18
LRRK1-208ENST00000532029 MT-CYBP00156 380 aaPredicted RBP22.43■■□□□ 1.18
LRRK1-208ENST00000532029 IFNB1P01574 187 aa22.43■■□□□ 1.18
LRRK1-208ENST00000532029 TUBB4AP04350 444 aa22.43■■□□□ 1.18
LRRK1-208ENST00000532029 PAFAH1B1P43034 410 aa22.43■■□□□ 1.18
LRRK1-208ENST00000532029 TNNT3P45378 269 aaPredicted RBP22.43■■□□□ 1.18
LRRK1-208ENST00000532029 CCR5P51681 352 aa22.43■■□□□ 1.18
LRRK1-208ENST00000532029 IHHQ14623 411 aa22.43■■□□□ 1.18
LRRK1-208ENST00000532029 PCSK7Q16549 785 aa22.43■■□□□ 1.18
LRRK1-208ENST00000532029 P3H1Q32P28 736 aa22.43■■□□□ 1.18
LRRK1-208ENST00000532029 WDR45BQ5MNZ6 344 aa22.43■■□□□ 1.18
LRRK1-208ENST00000532029 LAIR1Q6GTX8 287 aa22.43■■□□□ 1.18
LRRK1-208ENST00000532029 SLC41A1Q8IVJ1 513 aa22.43■■□□□ 1.18
LRRK1-208ENST00000532029 CCDC89Q8N998 374 aa22.43■■□□□ 1.18
LRRK1-208ENST00000532029 LPCAT1Q8NF37 534 aa22.43■■□□□ 1.18
LRRK1-208ENST00000532029 SNX19Q92543 992 aa22.43■■□□□ 1.18
LRRK1-208ENST00000532029 SPOCK2Q92563 424 aa22.43■■□□□ 1.18
LRRK1-208ENST00000532029 MAGOHBQ96A72 148 aaKnown RBP22.43■■□□□ 1.18
LRRK1-208ENST00000532029 RTP4Q96DX8 246 aa22.43■■□□□ 1.18
LRRK1-208ENST00000532029 LOXL4Q96JB6 756 aa22.43■■□□□ 1.18
LRRK1-208ENST00000532029 FEM1CQ96JP0 617 aa22.43■■□□□ 1.18
LRRK1-208ENST00000532029 VPS45Q9NRW7 570 aa22.43■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms