RNA–Protein interactions for RNA: ENST00000531525.2

ATM-216, Transcript of ATM serine/threonine kinase, humanhuman

TSL 1 (best)

Gene ATM, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-216ENST00000531525 KIF3AQ9Y496 699 aa6.54□□□□□ -1.36
ATM-216ENST00000531525 SESN1Q9Y6P5 492 aa6.54□□□□□ -1.36
ATM-216ENST00000531525 ATP8B3O60423 1300 aa6.53□□□□□ -1.36
ATM-216ENST00000531525 CCL15-CCL14A0A0B4J2E2 113 aa6.53□□□□□ -1.36
ATM-216ENST00000531525 RNF103-CHMP3A0A140T963 221 aa6.53□□□□□ -1.36
ATM-216ENST00000531525 OR6C76A6NM76 312 aa6.53□□□□□ -1.36
ATM-216ENST00000531525 C16orf96A6NNT2 1141 aa6.53□□□□□ -1.36
ATM-216ENST00000531525 RNF103O00237 685 aa6.53□□□□□ -1.36
ATM-216ENST00000531525 CFIP05156 583 aa6.53□□□□□ -1.36
ATM-216ENST00000531525 ZNF853P0CG23 659 aa6.53□□□□□ -1.36
ATM-216ENST00000531525 ERCC2P18074 760 aa6.53□□□□□ -1.36
ATM-216ENST00000531525 ATP5JP18859 108 aa6.53□□□□□ -1.36
ATM-216ENST00000531525 CDH2P19022 906 aaPredicted RBP6.53□□□□□ -1.36
ATM-216ENST00000531525 HOXC8P31273 242 aa6.53□□□□□ -1.36
ATM-216ENST00000531525 CSF2RBP32927 897 aa6.53□□□□□ -1.36
ATM-216ENST00000531525 ARL1P40616 181 aaPredicted RBP6.53□□□□□ -1.36
ATM-216ENST00000531525 VIPR2P41587 438 aa6.53□□□□□ -1.36
ATM-216ENST00000531525 MATR3P43243 847 aaKnown RBP eCLIP6.53□□□□□ -1.36
ATM-216ENST00000531525 STAT5BP51692 787 aa6.53□□□□□ -1.36
ATM-216ENST00000531525 BMXP51813 675 aa6.53□□□□□ -1.36
ATM-216ENST00000531525 LUMP51884 338 aaPredicted RBP6.53□□□□□ -1.36
ATM-216ENST00000531525 PRKAG1P54619 331 aa6.53□□□□□ -1.36
ATM-216ENST00000531525 FKBP1AP62942 108 aaKnown RBP6.53□□□□□ -1.36
ATM-216ENST00000531525 DUSP2Q05923 314 aa6.53□□□□□ -1.36
ATM-216ENST00000531525 GOLGA8FQ08AF8 430 aa6.53□□□□□ -1.36
ATM-216ENST00000531525 ITGA7Q13683 1181 aa6.53□□□□□ -1.36
ATM-216ENST00000531525 VGLL4Q14135 290 aa6.53□□□□□ -1.36
ATM-216ENST00000531525 SSPNQ14714 243 aa6.53□□□□□ -1.36
ATM-216ENST00000531525 IQCB1Q15051 598 aa6.53□□□□□ -1.36
ATM-216ENST00000531525 RABEP1Q15276 862 aa6.53□□□□□ -1.36
ATM-216ENST00000531525 CCL15Q16663 113 aa6.53□□□□□ -1.36
ATM-216ENST00000531525 TYSND1Q2T9J0 566 aa6.53□□□□□ -1.36
ATM-216ENST00000531525 IGSF11Q5DX21 431 aa6.53□□□□□ -1.36
ATM-216ENST00000531525 ZRANB3Q5FWF4 1079 aa6.53□□□□□ -1.36
ATM-216ENST00000531525 ZNF529Q6P280 563 aa6.53□□□□□ -1.36
ATM-216ENST00000531525 SARM1Q6SZW1 724 aa6.53□□□□□ -1.36
ATM-216ENST00000531525 PIK3AP1Q6ZUJ8 805 aa6.53□□□□□ -1.36
ATM-216ENST00000531525 ZNF572Q7Z3I7 529 aaPredicted RBP6.53□□□□□ -1.36
ATM-216ENST00000531525 HOOK3Q86VS8 718 aa6.53□□□□□ -1.36
ATM-216ENST00000531525 PROSER1Q86XN7 944 aa6.53□□□□□ -1.36
ATM-216ENST00000531525 PTGR2Q8N8N7 351 aaPredicted RBP6.53□□□□□ -1.36
ATM-216ENST00000531525 DNAJB14Q8TBM8 379 aa6.53□□□□□ -1.36
ATM-216ENST00000531525 ARRDC3Q96B67 414 aa6.53□□□□□ -1.36
ATM-216ENST00000531525 TMCO6Q96DC7 493 aa6.53□□□□□ -1.36
ATM-216ENST00000531525 PRMT6Q96LA8 375 aaPredicted RBP6.53□□□□□ -1.36
ATM-216ENST00000531525 TOX2Q96NM4 488 aa6.53□□□□□ -1.36
ATM-216ENST00000531525 SLC46A1Q96NT5 459 aa6.53□□□□□ -1.36
ATM-216ENST00000531525 DGAT2Q96PD7 388 aa6.53□□□□□ -1.36
ATM-216ENST00000531525 HIST1H2AAQ96QV6 131 aa6.53□□□□□ -1.36
ATM-216ENST00000531525 GAD1Q99259 594 aa6.53□□□□□ -1.36
ATM-216ENST00000531525 EIF3CQ99613 913 aaKnown RBP6.53□□□□□ -1.36
ATM-216ENST00000531525 NUDT22Q9BRQ3 303 aa6.53□□□□□ -1.36
ATM-216ENST00000531525 IMPG2Q9BZV3 1241 aa6.53□□□□□ -1.36
ATM-216ENST00000531525 CTDSP1Q9GZU7 261 aa6.53□□□□□ -1.36
ATM-216ENST00000531525 BCAS3Q9H6U6 928 aa6.53□□□□□ -1.36
ATM-216ENST00000531525 AATFQ9NY61 560 aaKnown RBP eCLIP6.53□□□□□ -1.36
ATM-216ENST00000531525 MPP6Q9NZW5 540 aa6.53□□□□□ -1.36
ATM-216ENST00000531525 AURKCQ9UQB9 309 aa6.53□□□□□ -1.36
ATM-216ENST00000531525 AK9Q5TCS8 1911 aa6.53□□□□□ -1.36
ATM-216ENST00000531525 DOCK3Q8IZD9 2030 aa6.53□□□□□ -1.36
ATM-216ENST00000531525 TEX22C9J3V5 150 aa6.52□□□□□ -1.37
ATM-216ENST00000531525 KLHL41O60662 606 aa6.52□□□□□ -1.37
ATM-216ENST00000531525 PENKP01210 267 aaPredicted RBP6.52□□□□□ -1.37
ATM-216ENST00000531525 CCDC159P0C7I6 412 aa6.52□□□□□ -1.37
ATM-216ENST00000531525 THBS4P35443 961 aa6.52□□□□□ -1.37
ATM-216ENST00000531525 IL15P40933 162 aaPredicted RBP6.52□□□□□ -1.37
ATM-216ENST00000531525 CAPZA1P52907 286 aa6.52□□□□□ -1.37
ATM-216ENST00000531525 ARFIP1P53367 373 aa6.52□□□□□ -1.37
ATM-216ENST00000531525 NCKAP1LP55160 1127 aa6.52□□□□□ -1.37
ATM-216ENST00000531525 ADAM17P78536 824 aa6.52□□□□□ -1.37
ATM-216ENST00000531525 SATB1Q01826 763 aa6.52□□□□□ -1.37
ATM-216ENST00000531525 SLFN5Q08AF3 891 aa6.52□□□□□ -1.37
ATM-216ENST00000531525 ALCAMQ13740 583 aa6.52□□□□□ -1.37
ATM-216ENST00000531525 STILQ15468 1287 aa6.52□□□□□ -1.37
ATM-216ENST00000531525 RUNDC3AQ59EK9 446 aa6.52□□□□□ -1.37
ATM-216ENST00000531525 KIAA0930Q6ICG6 404 aaPredicted RBP6.52□□□□□ -1.37
ATM-216ENST00000531525 DRICH1Q6PGQ1 229 aaPredicted RBP6.52□□□□□ -1.37
ATM-216ENST00000531525 C15orf52Q6ZUT6 534 aaKnown RBP6.52□□□□□ -1.37
ATM-216ENST00000531525 RRM2BQ7LG56 351 aa6.52□□□□□ -1.37
ATM-216ENST00000531525 RNF168Q8IYW5 571 aaPredicted RBP6.52□□□□□ -1.37
ATM-216ENST00000531525 FAM185AQ8N0U4 392 aa6.52□□□□□ -1.37
ATM-216ENST00000531525 SHCBP1Q8NEM2 672 aa6.52□□□□□ -1.37
ATM-216ENST00000531525 TMIEQ8NEW7 156 aa6.52□□□□□ -1.37
ATM-216ENST00000531525 SHC3Q92529 594 aa6.52□□□□□ -1.37
ATM-216ENST00000531525 SCAMP4Q969E2 229 aa6.52□□□□□ -1.37
ATM-216ENST00000531525 ZKSCAN4Q969J2 545 aaPredicted RBP6.52□□□□□ -1.37
ATM-216ENST00000531525 ZBTB45Q96K62 511 aaPredicted RBP6.52□□□□□ -1.37
ATM-216ENST00000531525 CNDP1Q96KN2 507 aa6.52□□□□□ -1.37
ATM-216ENST00000531525 SIGLEC10Q96LC7 697 aa6.52□□□□□ -1.37
ATM-216ENST00000531525 PWWP2AQ96N64 755 aa6.52□□□□□ -1.37
ATM-216ENST00000531525 PAFAH2Q99487 392 aa6.52□□□□□ -1.37
ATM-216ENST00000531525 NDC1Q9BTX1 674 aa6.52□□□□□ -1.37
ATM-216ENST00000531525 MRI1Q9BV20 369 aa6.52□□□□□ -1.37
ATM-216ENST00000531525 PLA2G12BQ9BX93 195 aa6.52□□□□□ -1.37
ATM-216ENST00000531525 REXO4Q9GZR2 422 aaKnown RBP6.52□□□□□ -1.37
ATM-216ENST00000531525 SIK2Q9H0K1 926 aa6.52□□□□□ -1.37
ATM-216ENST00000531525 IL1RAPL2Q9NP60 686 aa6.52□□□□□ -1.37
ATM-216ENST00000531525 SPATS2LQ9NUQ6 558 aaKnown RBP6.52□□□□□ -1.37
ATM-216ENST00000531525 HESX1Q9UBX0 185 aa6.52□□□□□ -1.37
ATM-216ENST00000531525 PIN4Q9Y237 131 aaKnown RBP6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms