RNA–Protein interactions for RNA: ENST00000531513.5

USP47-211, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 2

Gene USP47, Length 936 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-211ENST00000531513 CLDN16Q9Y5I7 305 aa4.62□□□□□ -1.67
USP47-211ENST00000531513 HEMK1Q9Y5R4 338 aaPredicted RBP4.62□□□□□ -1.67
USP47-211ENST00000531513 SIRT4Q9Y6E7 314 aaPredicted RBP4.62□□□□□ -1.67
USP47-211ENST00000531513 CACNA1IQ9P0X4 2223 aa4.62□□□□□ -1.67
USP47-211ENST00000531513 A0A1W2PRG0 241 aa4.61□□□□□ -1.67
USP47-211ENST00000531513 ARHGAP10A1A4S6 786 aa4.61□□□□□ -1.67
USP47-211ENST00000531513 TMEM247A6NEH6 219 aa4.61□□□□□ -1.67
USP47-211ENST00000531513 TTC36A6NLP5 189 aa4.61□□□□□ -1.67
USP47-211ENST00000531513 A8MV72 311 aaPredicted RBP4.61□□□□□ -1.67
USP47-211ENST00000531513 BTBD18B2RXH4 712 aa4.61□□□□□ -1.67
USP47-211ENST00000531513 BTBD19C9JJ37 291 aa4.61□□□□□ -1.67
USP47-211ENST00000531513 HLA-DQA2P01906 255 aa4.61□□□□□ -1.67
USP47-211ENST00000531513 TMEM191BP0C7N4 346 aa4.61□□□□□ -1.67
USP47-211ENST00000531513 SELLP14151 372 aa4.61□□□□□ -1.67
USP47-211ENST00000531513 ATF7P17544 494 aaPredicted RBP4.61□□□□□ -1.67
USP47-211ENST00000531513 SAT1P21673 171 aa4.61□□□□□ -1.67
USP47-211ENST00000531513 HOXD9P28356 352 aaPredicted RBP4.61□□□□□ -1.67
USP47-211ENST00000531513 BLKP51451 505 aa4.61□□□□□ -1.67
USP47-211ENST00000531513 CEBPZQ03701 1054 aaKnown RBP4.61□□□□□ -1.67
USP47-211ENST00000531513 DMWDQ09019 674 aa4.61□□□□□ -1.67
USP47-211ENST00000531513 CSTF3Q12996 717 aaKnown RBP4.61□□□□□ -1.67
USP47-211ENST00000531513 MYBPC2Q14324 1141 aa4.61□□□□□ -1.67
USP47-211ENST00000531513 FRG1Q14331 258 aaKnown RBP4.61□□□□□ -1.67
USP47-211ENST00000531513 MFSD13AQ14CX5 517 aa4.61□□□□□ -1.67
USP47-211ENST00000531513 TWIST1Q15672 202 aa4.61□□□□□ -1.67
USP47-211ENST00000531513 KYNUQ16719 465 aa4.61□□□□□ -1.67
USP47-211ENST00000531513 C1orf141Q5JVX7 400 aa4.61□□□□□ -1.67
USP47-211ENST00000531513 C10orf25Q5T742 122 aa4.61□□□□□ -1.67
USP47-211ENST00000531513 IL20RBQ6UXL0 311 aa4.61□□□□□ -1.67
USP47-211ENST00000531513 KDELC2Q7Z4H8 507 aa4.61□□□□□ -1.67
USP47-211ENST00000531513 GALNTL5Q7Z4T8 443 aa4.61□□□□□ -1.67
USP47-211ENST00000531513 ADGRA1Q86SQ6 560 aa4.61□□□□□ -1.67
USP47-211ENST00000531513 FAM160B2Q86V87 743 aa4.61□□□□□ -1.67
USP47-211ENST00000531513 GALNT13Q8IUC8 556 aa4.61□□□□□ -1.67
USP47-211ENST00000531513 POC5Q8NA72 575 aa4.61□□□□□ -1.67
USP47-211ENST00000531513 DNAAF1Q8NEP3 725 aa4.61□□□□□ -1.67
USP47-211ENST00000531513 CELF1Q92879 486 aaKnown RBP4.61□□□□□ -1.67
USP47-211ENST00000531513 SLC22A18Q96BI1 424 aa4.61□□□□□ -1.67
USP47-211ENST00000531513 VMP1Q96GC9 406 aa4.61□□□□□ -1.67
USP47-211ENST00000531513 GLIS2Q9BZE0 524 aaPredicted RBP4.61□□□□□ -1.67
USP47-211ENST00000531513 XRN2Q9H0D6 950 aaKnown RBP eCLIP4.61□□□□□ -1.67
USP47-211ENST00000531513 NDST4Q9H3R1 872 aa4.61□□□□□ -1.67
USP47-211ENST00000531513 Q9N2J8 555 aa4.61□□□□□ -1.67
USP47-211ENST00000531513 TXNRD2Q9NNW7 524 aa4.61□□□□□ -1.67
USP47-211ENST00000531513 GIMAP4Q9NUV9 329 aa4.61□□□□□ -1.67
USP47-211ENST00000531513 WWOXQ9NZC7 414 aa4.61□□□□□ -1.67
USP47-211ENST00000531513 TFCP2L1Q9NZI6 479 aa4.61□□□□□ -1.67
USP47-211ENST00000531513 HAO1Q9UJM8 370 aa4.61□□□□□ -1.67
USP47-211ENST00000531513 DHDHQ9UQ10 334 aa4.61□□□□□ -1.67
USP47-211ENST00000531513 MTMR6Q9Y217 621 aa4.61□□□□□ -1.67
USP47-211ENST00000531513 SESN1Q9Y6P5 492 aa4.61□□□□□ -1.67
USP47-211ENST00000531513 FAM169AQ9Y6X4 670 aa4.61□□□□□ -1.67
USP47-211ENST00000531513 SPATA31A5Q5VU36 1347 aa4.61□□□□□ -1.67
USP47-211ENST00000531513 SPATA31A7Q8IWB4 1347 aa4.61□□□□□ -1.67
USP47-211ENST00000531513 TAF4O00268 1085 aa4.6□□□□□ -1.67
USP47-211ENST00000531513 TBCAO75347 108 aaKnown RBP4.6□□□□□ -1.67
USP47-211ENST00000531513 MT-CO3P00414 261 aa4.6□□□□□ -1.67
USP47-211ENST00000531513 ADAP00813 363 aa4.6□□□□□ -1.67
USP47-211ENST00000531513 SERPINC1P01008 464 aa4.6□□□□□ -1.67
USP47-211ENST00000531513 RB1P06400 928 aa4.6□□□□□ -1.67
USP47-211ENST00000531513 HEXAP06865 529 aa4.6□□□□□ -1.67
USP47-211ENST00000531513 FCGR2AP12318 317 aa4.6□□□□□ -1.67
USP47-211ENST00000531513 EEF1DP29692 281 aaKnown RBP4.6□□□□□ -1.67
USP47-211ENST00000531513 SKIV2L2P42285 1042 aaKnown RBP4.6□□□□□ -1.67
USP47-211ENST00000531513 GABRB2P47870 512 aa4.6□□□□□ -1.67
USP47-211ENST00000531513 THBS3P49746 956 aa4.6□□□□□ -1.67
USP47-211ENST00000531513 GNAQP50148 359 aa4.6□□□□□ -1.67
USP47-211ENST00000531513 EFNA5P52803 228 aa4.6□□□□□ -1.67
USP47-211ENST00000531513 MRPL12P52815 198 aaKnown RBP4.6□□□□□ -1.67
USP47-211ENST00000531513 UBXN2AP68543 259 aa4.6□□□□□ -1.67
USP47-211ENST00000531513 TNFAIP1Q13829 316 aa4.6□□□□□ -1.67
USP47-211ENST00000531513 PCLAFQ15004 111 aa4.6□□□□□ -1.67
USP47-211ENST00000531513 RPE65Q16518 533 aa4.6□□□□□ -1.67
USP47-211ENST00000531513 EDRF1Q3B7T1 1238 aa4.6□□□□□ -1.67
USP47-211ENST00000531513 SERTAD4-AS1Q5TG53 156 aa4.6□□□□□ -1.67
USP47-211ENST00000531513 VWA5B1Q5TIE3 1220 aa4.6□□□□□ -1.67
USP47-211ENST00000531513 GKAP1Q5VSY0 366 aaPredicted RBP4.6□□□□□ -1.67
USP47-211ENST00000531513 MOB3CQ70IA8 216 aa4.6□□□□□ -1.67
USP47-211ENST00000531513 GSTA5Q7RTV2 222 aa4.6□□□□□ -1.67
USP47-211ENST00000531513 POMGNT2Q8NAT1 580 aa4.6□□□□□ -1.67
USP47-211ENST00000531513 SMRP1Q8NCR6 262 aa4.6□□□□□ -1.67
USP47-211ENST00000531513 GABPB2Q8TAK5 448 aaPredicted RBP4.6□□□□□ -1.67
USP47-211ENST00000531513 PSPC1Q8WXF1 523 aaKnown RBP4.6□□□□□ -1.67
USP47-211ENST00000531513 GTF3C6Q969F1 213 aa4.6□□□□□ -1.67
USP47-211ENST00000531513 C1orf74Q96LT6 269 aa4.6□□□□□ -1.67
USP47-211ENST00000531513 ADAD1Q96M93 576 aaKnown RBP4.6□□□□□ -1.67
USP47-211ENST00000531513 HS6ST2Q96MM7 605 aa4.6□□□□□ -1.67
USP47-211ENST00000531513 H2AFJQ9BTM1 129 aa4.6□□□□□ -1.67
USP47-211ENST00000531513 APOL6Q9BWW8 343 aa4.6□□□□□ -1.67
USP47-211ENST00000531513 SLC35C2Q9NQQ7 365 aa4.6□□□□□ -1.67
USP47-211ENST00000531513 ENTPD7Q9NQZ7 604 aa4.6□□□□□ -1.67
USP47-211ENST00000531513 RRP7BPQ9NSQ0 103 aa4.6□□□□□ -1.67
USP47-211ENST00000531513 ARGLU1Q9NWB6 273 aaPredicted RBP4.6□□□□□ -1.67
USP47-211ENST00000531513 MARCH4Q9P2E8 410 aaPredicted RBP4.6□□□□□ -1.67
USP47-211ENST00000531513 NLKQ9UBE8 527 aa4.6□□□□□ -1.67
USP47-211ENST00000531513 DDX52Q9Y2R4 599 aaKnown RBP eCLIP4.6□□□□□ -1.67
USP47-211ENST00000531513 TCRBV7S3A2A0A539 114 aa4.59□□□□□ -1.67
USP47-211ENST00000531513 CDRT15L2A8MXV6 281 aa4.59□□□□□ -1.67
USP47-211ENST00000531513 KCNJ18B7U540 433 aa4.59□□□□□ -1.67
USP47-211ENST00000531513 SCAMP1O15126 338 aa4.59□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms