RNA–Protein interactions for RNA: ENST00000530893.6

BRCA2-204, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA2, Length 2,011 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-204ENST00000530893 PFKPQ01813 784 aa17.34■□□□□ 0.37
BRCA2-204ENST00000530893 ITKQ08881 620 aa17.34■□□□□ 0.37
BRCA2-204ENST00000530893 EFEMP1Q12805 493 aa17.34■□□□□ 0.37
BRCA2-204ENST00000530893 ACAP2Q15057 778 aa17.34■□□□□ 0.37
BRCA2-204ENST00000530893 CNSTQ6PJW8 725 aa17.34■□□□□ 0.37
BRCA2-204ENST00000530893 IZUMO2Q6UXV1 221 aa17.34■□□□□ 0.37
BRCA2-204ENST00000530893 TRIM67Q6ZTA4 783 aa17.34■□□□□ 0.37
BRCA2-204ENST00000530893 HPS6Q86YV9 775 aa17.34■□□□□ 0.37
BRCA2-204ENST00000530893 CILP2Q8IUL8 1156 aa17.34■□□□□ 0.37
BRCA2-204ENST00000530893 KBTBD2Q8IY47 623 aa17.34■□□□□ 0.37
BRCA2-204ENST00000530893 PABPC5Q96DU9 382 aaKnown RBP17.34■□□□□ 0.37
BRCA2-204ENST00000530893 PPP1R12CQ9BZL4 782 aa17.34■□□□□ 0.37
BRCA2-204ENST00000530893 ZBTB26Q9HCK0 441 aa17.34■□□□□ 0.37
BRCA2-204ENST00000530893 TLR8Q9NR97 1041 aaKnown RBP17.34■□□□□ 0.37
BRCA2-204ENST00000530893 MTPAPQ9NVV4 582 aaKnown RBP eCLIP17.34■□□□□ 0.37
BRCA2-204ENST00000530893 ZDHHC7Q9NXF8 308 aa17.34■□□□□ 0.37
BRCA2-204ENST00000530893 BCAP29Q9UHQ4 241 aa17.34■□□□□ 0.37
BRCA2-204ENST00000530893 SCOCQ9UIL1 159 aa17.34■□□□□ 0.37
BRCA2-204ENST00000530893 MAGEA13PA6NCF6 341 aa17.33■□□□□ 0.37
BRCA2-204ENST00000530893 BUD23O43709 281 aaKnown RBP17.33■□□□□ 0.37
BRCA2-204ENST00000530893 HAPLN1P10915 354 aaPredicted RBP17.33■□□□□ 0.37
BRCA2-204ENST00000530893 HOXB8P17481 243 aaPredicted RBP17.33■□□□□ 0.37
BRCA2-204ENST00000530893 GRK4P32298 578 aa17.33■□□□□ 0.37
BRCA2-204ENST00000530893 PBX3P40426 434 aa17.33■□□□□ 0.37
BRCA2-204ENST00000530893 NUDT2P50583 147 aa17.33■□□□□ 0.37
BRCA2-204ENST00000530893 PGGT1BP53609 377 aa17.33■□□□□ 0.37
BRCA2-204ENST00000530893 USP46P62068 366 aa17.33■□□□□ 0.37
BRCA2-204ENST00000530893 RING1Q06587 406 aa17.33■□□□□ 0.37
BRCA2-204ENST00000530893 MRPL58Q14197 206 aaKnown RBP17.33■□□□□ 0.37
BRCA2-204ENST00000530893 ALFQ53S48 1182 aa17.33■□□□□ 0.37
BRCA2-204ENST00000530893 KBTBD6Q86V97 674 aa17.33■□□□□ 0.37
BRCA2-204ENST00000530893 SNX32Q86XE0 403 aa17.33■□□□□ 0.37
BRCA2-204ENST00000530893 SLC22A9Q8IVM8 553 aa17.33■□□□□ 0.37
BRCA2-204ENST00000530893 CCNYL1Q8N7R7 359 aa17.33■□□□□ 0.37
BRCA2-204ENST00000530893 TXNDC5Q8NBS9 432 aaKnown RBP17.33■□□□□ 0.37
BRCA2-204ENST00000530893 OR13J1Q8NGT2 312 aa17.33■□□□□ 0.37
BRCA2-204ENST00000530893 CEP70Q8NHQ1 597 aa17.33■□□□□ 0.37
BRCA2-204ENST00000530893 SPDL1Q96EA4 605 aa17.33■□□□□ 0.37
BRCA2-204ENST00000530893 UBXN10Q96LJ8 280 aa17.33■□□□□ 0.37
BRCA2-204ENST00000530893 POMKQ9H5K3 350 aa17.33■□□□□ 0.37
BRCA2-204ENST00000530893 LOC285095A0A1B0GVY8 99 aa17.33■□□□□ 0.36
BRCA2-204ENST00000530893 RAMP2O60895 175 aa17.33■□□□□ 0.36
BRCA2-204ENST00000530893 CNTN5O94779 1100 aa17.33■□□□□ 0.36
BRCA2-204ENST00000530893 IPO13O94829 963 aaKnown RBP17.33■□□□□ 0.36
BRCA2-204ENST00000530893 IGLV3-27P01718 113 aa17.33■□□□□ 0.36
BRCA2-204ENST00000530893 CCR10P46092 362 aa17.33■□□□□ 0.36
BRCA2-204ENST00000530893 MAPKAPK2P49137 400 aa17.33■□□□□ 0.36
BRCA2-204ENST00000530893 GPR15P49685 360 aa17.33■□□□□ 0.36
BRCA2-204ENST00000530893 ACLYP53396 1101 aa17.33■□□□□ 0.36
BRCA2-204ENST00000530893 CSHL1Q14406 222 aa17.33■□□□□ 0.36
BRCA2-204ENST00000530893 POLD3Q15054 466 aaPredicted RBP17.33■□□□□ 0.36
BRCA2-204ENST00000530893 PSMD5Q16401 504 aa17.33■□□□□ 0.36
BRCA2-204ENST00000530893 CTXN3Q4LDR2 81 aa17.33■□□□□ 0.36
BRCA2-204ENST00000530893 SDHAF4Q5VUM1 108 aa17.33■□□□□ 0.36
BRCA2-204ENST00000530893 ZNF280DQ6N043 979 aa17.33■□□□□ 0.36
BRCA2-204ENST00000530893 FBXL22Q6P050 247 aa17.33■□□□□ 0.36
BRCA2-204ENST00000530893 TMEM154Q6P9G4 183 aa17.33■□□□□ 0.36
BRCA2-204ENST00000530893 TRAF7Q6Q0C0 670 aa17.33■□□□□ 0.36
BRCA2-204ENST00000530893 PYDC1Q8WXC3 89 aa17.33■□□□□ 0.36
BRCA2-204ENST00000530893 GATA6Q92908 595 aa17.33■□□□□ 0.36
BRCA2-204ENST00000530893 FBXO32Q969P5 355 aa17.33■□□□□ 0.36
BRCA2-204ENST00000530893 PSMG2Q969U7 264 aa17.33■□□□□ 0.36
BRCA2-204ENST00000530893 CCDC124Q96CT7 223 aaKnown RBP17.33■□□□□ 0.36
BRCA2-204ENST00000530893 ZMPSTE24O75844 475 aa17.32■□□□□ 0.36
BRCA2-204ENST00000530893 ALDH1A1P00352 501 aa17.32■□□□□ 0.36
BRCA2-204ENST00000530893 EPOP01588 193 aa17.32■□□□□ 0.36
BRCA2-204ENST00000530893 HSPA1AP0DMV8 641 aaKnown RBP17.32■□□□□ 0.36
BRCA2-204ENST00000530893 HSPA1BP0DMV9 641 aaKnown RBP17.32■□□□□ 0.36
BRCA2-204ENST00000530893 KPNA1P52294 538 aaPredicted RBP17.32■□□□□ 0.36
BRCA2-204ENST00000530893 DSC2Q02487 901 aa17.32■□□□□ 0.36
BRCA2-204ENST00000530893 SMARCB1Q12824 385 aa17.32■□□□□ 0.36
BRCA2-204ENST00000530893 CDC16Q13042 620 aa17.32■□□□□ 0.36
BRCA2-204ENST00000530893 RFTN1Q14699 578 aaPredicted RBP17.32■□□□□ 0.36
BRCA2-204ENST00000530893 RBM20Q5T481 1227 aaKnown RBP17.32■□□□□ 0.36
BRCA2-204ENST00000530893 DSELQ8IZU8 1212 aa17.32■□□□□ 0.36
BRCA2-204ENST00000530893 PGAM4Q8N0Y7 254 aa17.32■□□□□ 0.36
BRCA2-204ENST00000530893 ARRDC2Q8TBH0 407 aa17.32■□□□□ 0.36
BRCA2-204ENST00000530893 MOCOSQ96EN8 888 aa17.32■□□□□ 0.36
BRCA2-204ENST00000530893 SPATA17Q96L03 361 aa17.32■□□□□ 0.36
BRCA2-204ENST00000530893 TRMOQ9BU70 441 aa17.32■□□□□ 0.36
BRCA2-204ENST00000530893 RETREG1Q9H6L5 497 aa17.32■□□□□ 0.36
BRCA2-204ENST00000530893 EFCAB1Q9HAE3 211 aa17.32■□□□□ 0.36
BRCA2-204ENST00000530893 MARCH2Q9P0N8 246 aa17.32■□□□□ 0.36
BRCA2-204ENST00000530893 PRG3Q9Y2Y8 225 aaPredicted RBP17.32■□□□□ 0.36
BRCA2-204ENST00000530893 VWA7Q9Y334 891 aa17.32■□□□□ 0.36
BRCA2-204ENST00000530893 THSD7BQ9C0I4 1608 aa17.32■□□□□ 0.36
BRCA2-204ENST00000530893 AIM2O14862 343 aa17.31■□□□□ 0.36
BRCA2-204ENST00000530893 MAXP61244 160 aa17.31■□□□□ 0.36
BRCA2-204ENST00000530893 ACVR1Q04771 509 aa17.31■□□□□ 0.36
BRCA2-204ENST00000530893 SERINC3Q13530 473 aa17.31■□□□□ 0.36
BRCA2-204ENST00000530893 TCHHL1Q5QJ38 904 aaPredicted RBP17.31■□□□□ 0.36
BRCA2-204ENST00000530893 HECTD2Q5U5R9 776 aa17.31■□□□□ 0.36
BRCA2-204ENST00000530893 NXNQ6DKJ4 435 aa17.31■□□□□ 0.36
BRCA2-204ENST00000530893 BNC2Q6ZN30 1099 aaPredicted RBP17.31■□□□□ 0.36
BRCA2-204ENST00000530893 SPATA6LQ8N4H0 392 aa17.31■□□□□ 0.36
BRCA2-204ENST00000530893 SPPL2BQ8TCT7 592 aa17.31■□□□□ 0.36
BRCA2-204ENST00000530893 LINC01599Q8WXQ3 324 aa17.31■□□□□ 0.36
BRCA2-204ENST00000530893 PPP2R3CQ969Q6 453 aa17.31■□□□□ 0.36
BRCA2-204ENST00000530893 GLT1D1Q96MS3 346 aa17.31■□□□□ 0.36
BRCA2-204ENST00000530893 KLHL5Q96PQ7 755 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms