RNA–Protein interactions for RNA: ENST00000529445.1

SORL1-208, Transcript of sortilin related receptor 1, humanhuman

TSL 2

Gene SORL1, Length 616 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORL1-208ENST00000529445 TBATAQ96M53 351 aa12.22□□□□□ -0.45
SORL1-208ENST00000529445 ZNF641Q96N77 438 aaPredicted RBP12.22□□□□□ -0.45
SORL1-208ENST00000529445 TUBGCP5Q96RT8 1024 aa12.22□□□□□ -0.45
SORL1-208ENST00000529445 PEBP4Q96S96 227 aa12.22□□□□□ -0.45
SORL1-208ENST00000529445 WRAP53Q9BUR4 548 aaKnown RBP12.22□□□□□ -0.45
SORL1-208ENST00000529445 CAAP1Q9H8G2 361 aa12.22□□□□□ -0.45
SORL1-208ENST00000529445 SP110Q9HB58 689 aa12.22□□□□□ -0.45
SORL1-208ENST00000529445 SPASTQ9UBP0 616 aa12.22□□□□□ -0.45
SORL1-208ENST00000529445 CNOT8Q9UFF9 292 aaKnown RBP12.22□□□□□ -0.45
SORL1-208ENST00000529445 APOBEC3BQ9UH17 382 aaKnown RBP12.22□□□□□ -0.45
SORL1-208ENST00000529445 PCSK1NQ9UHG2 260 aa12.22□□□□□ -0.45
SORL1-208ENST00000529445 KALRNO60229 2985 aa12.22□□□□□ -0.45
SORL1-208ENST00000529445 LY6G6EA0A0G2JKS1 128 aa12.21□□□□□ -0.45
SORL1-208ENST00000529445 J3KR12 359 aa12.21□□□□□ -0.45
SORL1-208ENST00000529445 OPA1O60313 960 aa12.21□□□□□ -0.45
SORL1-208ENST00000529445 MT-CO3P00414 261 aa12.21□□□□□ -0.45
SORL1-208ENST00000529445 SERPINC1P01008 464 aa12.21□□□□□ -0.45
SORL1-208ENST00000529445 SERPINA4P29622 427 aa12.21□□□□□ -0.45
SORL1-208ENST00000529445 MIPP30301 263 aa12.21□□□□□ -0.45
SORL1-208ENST00000529445 ABCG1P45844 678 aa12.21□□□□□ -0.45
SORL1-208ENST00000529445 PAPOLAP51003 745 aaKnown RBP12.21□□□□□ -0.45
SORL1-208ENST00000529445 EIF2B5Q13144 721 aaKnown RBP12.21□□□□□ -0.45
SORL1-208ENST00000529445 IRF4Q15306 451 aa12.21□□□□□ -0.45
SORL1-208ENST00000529445 CA9Q16790 459 aa12.21□□□□□ -0.45
SORL1-208ENST00000529445 KLHL40Q2TBA0 621 aa12.21□□□□□ -0.45
SORL1-208ENST00000529445 TMEM52BQ4KMG9 183 aa12.21□□□□□ -0.45
SORL1-208ENST00000529445 PPP6R3Q5H9R7 873 aaPredicted RBP12.21□□□□□ -0.45
SORL1-208ENST00000529445 TPRG1LQ5T0D9 272 aa12.21□□□□□ -0.45
SORL1-208ENST00000529445 BRAT1Q6PJG6 821 aa12.21□□□□□ -0.45
SORL1-208ENST00000529445 KDM7AQ6ZMT4 941 aa12.21□□□□□ -0.45
SORL1-208ENST00000529445 PHACTR4Q8IZ21 702 aa12.21□□□□□ -0.45
SORL1-208ENST00000529445 TP53I13Q8NBR0 393 aaPredicted RBP12.21□□□□□ -0.45
SORL1-208ENST00000529445 IFI44Q8TCB0 444 aa12.21□□□□□ -0.45
SORL1-208ENST00000529445 LMX1AQ8TE12 382 aa12.21□□□□□ -0.45
SORL1-208ENST00000529445 GLMNQ92990 594 aa12.21□□□□□ -0.45
SORL1-208ENST00000529445 DCBLD2Q96PD2 775 aa12.21□□□□□ -0.45
SORL1-208ENST00000529445 DEPDC7Q96QD5 511 aa12.21□□□□□ -0.45
SORL1-208ENST00000529445 KCTD15Q96SI1 283 aaPredicted RBP12.21□□□□□ -0.45
SORL1-208ENST00000529445 IL12RB2Q99665 862 aa12.21□□□□□ -0.45
SORL1-208ENST00000529445 CINPQ9BW66 212 aaPredicted RBP12.21□□□□□ -0.45
SORL1-208ENST00000529445 EDEM3Q9BZQ6 932 aa12.21□□□□□ -0.45
SORL1-208ENST00000529445 SLC13A1Q9BZW2 595 aa12.21□□□□□ -0.45
SORL1-208ENST00000529445 SUV39H2Q9H5I1 410 aa12.21□□□□□ -0.45
SORL1-208ENST00000529445 ATP13A3Q9H7F0 1226 aa12.21□□□□□ -0.45
SORL1-208ENST00000529445 MRPL47Q9HD33 250 aaKnown RBP12.21□□□□□ -0.45
SORL1-208ENST00000529445 PCDH12Q9NPG4 1184 aa12.21□□□□□ -0.45
SORL1-208ENST00000529445 KLF15Q9UIH9 416 aa12.21□□□□□ -0.45
SORL1-208ENST00000529445 U3KQA8 63 aa12.21□□□□□ -0.45
SORL1-208ENST00000529445 SHROOM3Q8TF72 1996 aa12.2□□□□□ -0.46
SORL1-208ENST00000529445 DFFAO00273 331 aa12.2□□□□□ -0.46
SORL1-208ENST00000529445 DDX3XO00571 662 aaKnown RBP eCLIP12.2□□□□□ -0.46
SORL1-208ENST00000529445 TPP1O14773 563 aa12.2□□□□□ -0.46
SORL1-208ENST00000529445 RRP8O43159 456 aaKnown RBP12.2□□□□□ -0.46
SORL1-208ENST00000529445 BRINP1O60477 761 aa12.2□□□□□ -0.46
SORL1-208ENST00000529445 LRCH4O75427 683 aa12.2□□□□□ -0.46
SORL1-208ENST00000529445 PALMO75781 387 aa12.2□□□□□ -0.46
SORL1-208ENST00000529445 C6P13671 934 aa12.2□□□□□ -0.46
SORL1-208ENST00000529445 ERCC2P18074 760 aa12.2□□□□□ -0.46
SORL1-208ENST00000529445 MMP12P39900 470 aa12.2□□□□□ -0.46
SORL1-208ENST00000529445 CSNK1DP48730 415 aa12.2□□□□□ -0.46
SORL1-208ENST00000529445 TPM4P67936 248 aa12.2□□□□□ -0.46
SORL1-208ENST00000529445 RFTN1Q14699 578 aaPredicted RBP12.2□□□□□ -0.46
SORL1-208ENST00000529445 LRRC14Q15048 493 aa12.2□□□□□ -0.46
SORL1-208ENST00000529445 NR0B2Q15466 257 aa12.2□□□□□ -0.46
SORL1-208ENST00000529445 UGP2Q16851 508 aa12.2□□□□□ -0.46
SORL1-208ENST00000529445 DEFB133Q30KQ1 61 aa12.2□□□□□ -0.46
SORL1-208ENST00000529445 PRRT3Q5FWE3 981 aa12.2□□□□□ -0.46
SORL1-208ENST00000529445 FIGNQ5HY92 759 aa12.2□□□□□ -0.46
SORL1-208ENST00000529445 CDCP2Q5VXM1 449 aa12.2□□□□□ -0.46
SORL1-208ENST00000529445 AFMIDQ63HM1 303 aa12.2□□□□□ -0.46
SORL1-208ENST00000529445 LRRC69Q6ZNQ3 347 aa12.2□□□□□ -0.46
SORL1-208ENST00000529445 CYP4V2Q6ZWL3 525 aaPredicted RBP12.2□□□□□ -0.46
SORL1-208ENST00000529445 RBFAQ8N0V3 343 aa12.2□□□□□ -0.46
SORL1-208ENST00000529445 ARFGAP1Q8N6T3 406 aa12.2□□□□□ -0.46
SORL1-208ENST00000529445 TSEN2Q8NCE0 465 aaKnown RBP12.2□□□□□ -0.46
SORL1-208ENST00000529445 SNIP1Q8TAD8 396 aaKnown RBP12.2□□□□□ -0.46
SORL1-208ENST00000529445 MAPK15Q8TD08 544 aa12.2□□□□□ -0.46
SORL1-208ENST00000529445 LRRC61Q9BV99 259 aa12.2□□□□□ -0.46
SORL1-208ENST00000529445 TRIM7Q9C029 511 aa12.2□□□□□ -0.46
SORL1-208ENST00000529445 SLC39A8Q9C0K1 460 aa12.2□□□□□ -0.46
SORL1-208ENST00000529445 ABCG4Q9H172 646 aa12.2□□□□□ -0.46
SORL1-208ENST00000529445 ZWILCHQ9H900 591 aa12.2□□□□□ -0.46
SORL1-208ENST00000529445 MBNL1Q9NR56 388 aaKnown RBP12.2□□□□□ -0.46
SORL1-208ENST00000529445 SALL4Q9UJQ4 1053 aa12.2□□□□□ -0.46
SORL1-208ENST00000529445 ATP8A1Q9Y2Q0 1164 aa12.2□□□□□ -0.46
SORL1-208ENST00000529445 COL27A1Q8IZC6 1860 aaPredicted RBP12.19□□□□□ -0.46
SORL1-208ENST00000529445 TMEM110-MUSTN1A8MSY1 372 aa12.19□□□□□ -0.46
SORL1-208ENST00000529445 LMO7DNF2Z398 122 aa12.19□□□□□ -0.46
SORL1-208ENST00000529445 H3BRJ5 948 aa12.19□□□□□ -0.46
SORL1-208ENST00000529445 TLX3O43711 291 aaPredicted RBP12.19□□□□□ -0.46
SORL1-208ENST00000529445 MYF5P13349 255 aa12.19□□□□□ -0.46
SORL1-208ENST00000529445 ITIH2P19823 946 aa12.19□□□□□ -0.46
SORL1-208ENST00000529445 HTR1BP28222 390 aa12.19□□□□□ -0.46
SORL1-208ENST00000529445 PCK1P35558 622 aa12.19□□□□□ -0.46
SORL1-208ENST00000529445 ACTN2P35609 894 aa12.19□□□□□ -0.46
SORL1-208ENST00000529445 EIF4A3P38919 411 aaKnown RBP12.19□□□□□ -0.46
SORL1-208ENST00000529445 EIF2S3P41091 472 aaKnown RBP12.19□□□□□ -0.46
SORL1-208ENST00000529445 HCAR3P49019 387 aa12.19□□□□□ -0.46
SORL1-208ENST00000529445 RPIAP49247 311 aa12.19□□□□□ -0.46
SORL1-208ENST00000529445 PEX5P50542 639 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms