RNA–Protein interactions for RNA: ENST00000528165.5

CAPN1-214, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 2,828 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-214ENST00000528165 PGK1P00558 417 aa14.77□□□□□ -0.04
CAPN1-214ENST00000528165 AHSGP02765 367 aa14.77□□□□□ -0.04
CAPN1-214ENST00000528165 ATP5F1P24539 256 aaPredicted RBP14.77□□□□□ -0.04
CAPN1-214ENST00000528165 CAPGP40121 348 aa14.77□□□□□ -0.04
CAPN1-214ENST00000528165 CD151P48509 253 aa14.77□□□□□ -0.04
CAPN1-214ENST00000528165 BACE1P56817 501 aa14.77□□□□□ -0.04
CAPN1-214ENST00000528165 STX1BP61266 288 aa14.77□□□□□ -0.04
CAPN1-214ENST00000528165 GRSF1Q12849 480 aaKnown RBP eCLIP14.77□□□□□ -0.04
CAPN1-214ENST00000528165 UGP2Q16851 508 aa14.77□□□□□ -0.04
CAPN1-214ENST00000528165 CNDP2Q96KP4 475 aaKnown RBP14.77□□□□□ -0.04
CAPN1-214ENST00000528165 GPR78Q96P69 363 aa14.77□□□□□ -0.04
CAPN1-214ENST00000528165 MRPL57Q9BQC6 102 aaKnown RBP14.77□□□□□ -0.04
CAPN1-214ENST00000528165 HEPHQ9BQS7 1158 aa14.77□□□□□ -0.04
CAPN1-214ENST00000528165 TDRD1Q9BXT4 1180 aaKnown RBP14.77□□□□□ -0.04
CAPN1-214ENST00000528165 ZFYVE28Q9HCC9 887 aa14.77□□□□□ -0.04
CAPN1-214ENST00000528165 C8orf4Q9NR00 106 aa14.77□□□□□ -0.04
CAPN1-214ENST00000528165 ATAD3AQ9NVI7 634 aa14.77□□□□□ -0.04
CAPN1-214ENST00000528165 FZD1Q9UP38 647 aa14.77□□□□□ -0.04
CAPN1-214ENST00000528165 TANC1Q9C0D5 1861 aa14.77□□□□□ -0.04
CAPN1-214ENST00000528165 COL11A1P12107 1806 aaPredicted RBP14.77□□□□□ -0.05
CAPN1-214ENST00000528165 EI24O14681 340 aa14.77□□□□□ -0.05
CAPN1-214ENST00000528165 IQCF3P0C7M6 154 aa14.77□□□□□ -0.05
CAPN1-214ENST00000528165 CYP2B6P20813 491 aa14.77□□□□□ -0.05
CAPN1-214ENST00000528165 JAK1P23458 1154 aa14.77□□□□□ -0.05
CAPN1-214ENST00000528165 TMBIM6P55061 237 aa14.77□□□□□ -0.05
CAPN1-214ENST00000528165 DNAJB13P59910 316 aa14.77□□□□□ -0.05
CAPN1-214ENST00000528165 PAFAH1B3Q15102 231 aaKnown RBP14.77□□□□□ -0.05
CAPN1-214ENST00000528165 KCTD11Q693B1 232 aa14.77□□□□□ -0.05
CAPN1-214ENST00000528165 CHST15Q7LFX5 561 aaPredicted RBP14.77□□□□□ -0.05
CAPN1-214ENST00000528165 CEP97Q8IW35 865 aa14.77□□□□□ -0.05
CAPN1-214ENST00000528165 DNERQ8NFT8 737 aa14.77□□□□□ -0.05
CAPN1-214ENST00000528165 TRAPPC12Q8WVT3 735 aa14.77□□□□□ -0.05
CAPN1-214ENST00000528165 MLPHQ9BV36 600 aaPredicted RBP14.77□□□□□ -0.05
CAPN1-214ENST00000528165 IL1RL2Q9HB29 575 aa14.77□□□□□ -0.05
CAPN1-214ENST00000528165 TBC1D13Q9NVG8 400 aa14.77□□□□□ -0.05
CAPN1-214ENST00000528165 EGFL7Q9UHF1 273 aa14.77□□□□□ -0.05
CAPN1-214ENST00000528165 TSC22D4Q9Y3Q8 395 aa14.77□□□□□ -0.05
CAPN1-214ENST00000528165 TCAF1Q9Y4C2 921 aa14.77□□□□□ -0.05
CAPN1-214ENST00000528165 GPC6Q9Y625 555 aaPredicted RBP14.77□□□□□ -0.05
CAPN1-214ENST00000528165 NEMP2A6NFY4 417 aa14.76□□□□□ -0.05
CAPN1-214ENST00000528165 ZBTB42B2RXF5 422 aa14.76□□□□□ -0.05
CAPN1-214ENST00000528165 EEF2KO00418 725 aaKnown RBP14.76□□□□□ -0.05
CAPN1-214ENST00000528165 KPNA4O00629 521 aaPredicted RBP14.76□□□□□ -0.05
CAPN1-214ENST00000528165 WNT10BO00744 389 aa14.76□□□□□ -0.05
CAPN1-214ENST00000528165 ZNF24P17028 368 aa14.76□□□□□ -0.05
CAPN1-214ENST00000528165 EEF1B2P24534 225 aaKnown RBP14.76□□□□□ -0.05
CAPN1-214ENST00000528165 YAP1P46937 504 aaKnown RBP14.76□□□□□ -0.05
CAPN1-214ENST00000528165 CCT8P50990 548 aa14.76□□□□□ -0.05
CAPN1-214ENST00000528165 KPNA2P52292 529 aaKnown RBP14.76□□□□□ -0.05
CAPN1-214ENST00000528165 ATP6V0D1P61421 351 aa14.76□□□□□ -0.05
CAPN1-214ENST00000528165 CMTR2Q8IYT2 770 aaKnown RBP14.76□□□□□ -0.05
CAPN1-214ENST00000528165 PNPT1Q8TCS8 783 aaKnown RBP14.76□□□□□ -0.05
CAPN1-214ENST00000528165 FAM149B1Q96BN6 582 aa14.76□□□□□ -0.05
CAPN1-214ENST00000528165 YTHDF1Q9BYJ9 559 aaKnown RBP14.76□□□□□ -0.05
CAPN1-214ENST00000528165 RHOBTB2Q9BYZ6 727 aa14.76□□□□□ -0.05
CAPN1-214ENST00000528165 CYP4F12Q9HCS2 524 aa14.76□□□□□ -0.05
CAPN1-214ENST00000528165 PRMT7Q9NVM4 692 aaPredicted RBP14.76□□□□□ -0.05
CAPN1-214ENST00000528165 RIC8BQ9NVN3 520 aa14.76□□□□□ -0.05
CAPN1-214ENST00000528165 GIN1Q9NXP7 522 aa14.76□□□□□ -0.05
CAPN1-214ENST00000528165 SMPD3Q9NY59 655 aaPredicted RBP14.76□□□□□ -0.05
CAPN1-214ENST00000528165 FAM95CA0A1B0GW59 222 aa14.76□□□□□ -0.05
CAPN1-214ENST00000528165 DYNC1LI2O43237 492 aaPredicted RBP14.76□□□□□ -0.05
CAPN1-214ENST00000528165 CNOT3O75175 753 aaKnown RBP14.76□□□□□ -0.05
CAPN1-214ENST00000528165 CLPXO76031 633 aa14.76□□□□□ -0.05
CAPN1-214ENST00000528165 STAU1O95793 577 aaKnown RBP14.76□□□□□ -0.05
CAPN1-214ENST00000528165 MATN1P21941 496 aa14.76□□□□□ -0.05
CAPN1-214ENST00000528165 ADORA2BP29275 332 aa14.76□□□□□ -0.05
CAPN1-214ENST00000528165 SCNN1AP37088 669 aa14.76□□□□□ -0.05
CAPN1-214ENST00000528165 MATKP42679 507 aa14.76□□□□□ -0.05
CAPN1-214ENST00000528165 HLCSP50747 726 aa14.76□□□□□ -0.05
CAPN1-214ENST00000528165 CLCN3P51790 818 aa14.76□□□□□ -0.05
CAPN1-214ENST00000528165 BST2Q10589 180 aaKnown RBP14.76□□□□□ -0.05
CAPN1-214ENST00000528165 PDZD4Q76G19 769 aaPredicted RBP14.76□□□□□ -0.05
CAPN1-214ENST00000528165 CUZD1Q86UP6 607 aa14.76□□□□□ -0.05
CAPN1-214ENST00000528165 SCAIQ8N9R8 606 aa14.76□□□□□ -0.05
CAPN1-214ENST00000528165 MTMR14Q8NCE2 650 aa14.76□□□□□ -0.05
CAPN1-214ENST00000528165 PDPRQ8NCN5 879 aa14.76□□□□□ -0.05
CAPN1-214ENST00000528165 OR13F1Q8NGS4 319 aa14.76□□□□□ -0.05
CAPN1-214ENST00000528165 CASP10Q92851 521 aa14.76□□□□□ -0.05
CAPN1-214ENST00000528165 TAMM41Q96BW9 452 aa14.76□□□□□ -0.05
CAPN1-214ENST00000528165 FEM1CQ96JP0 617 aa14.76□□□□□ -0.05
CAPN1-214ENST00000528165 LPIN3Q9BQK8 851 aa14.76□□□□□ -0.05
CAPN1-214ENST00000528165 SRCAPQ6ZRS2 3230 aa14.76□□□□□ -0.05
CAPN1-214ENST00000528165 RBM47A0AV96 593 aaKnown RBP14.75□□□□□ -0.05
CAPN1-214ENST00000528165 NME4O00746 187 aa14.75□□□□□ -0.05
CAPN1-214ENST00000528165 MT-CO1P00395 513 aa14.75□□□□□ -0.05
CAPN1-214ENST00000528165 PLCL1Q15111 1095 aa14.75□□□□□ -0.05
CAPN1-214ENST00000528165 SLC25A52Q3SY17 297 aa14.75□□□□□ -0.05
CAPN1-214ENST00000528165 CCNYL2Q5T2Q4 361 aa14.75□□□□□ -0.05
CAPN1-214ENST00000528165 SPRED1Q7Z699 444 aa14.75□□□□□ -0.05
CAPN1-214ENST00000528165 NT5DC4Q86YG4 428 aa14.75□□□□□ -0.05
CAPN1-214ENST00000528165 DDIASQ8IXT1 998 aa14.75□□□□□ -0.05
CAPN1-214ENST00000528165 DEFB106AQ8N104 65 aa14.75□□□□□ -0.05
CAPN1-214ENST00000528165 OR6B3Q8NGW1 331 aa14.75□□□□□ -0.05
CAPN1-214ENST00000528165 HDAC10Q969S8 669 aa14.75□□□□□ -0.05
CAPN1-214ENST00000528165 OLFM1Q99784 485 aa14.75□□□□□ -0.05
CAPN1-214ENST00000528165 SEZ6LQ9BYH1 1024 aa14.75□□□□□ -0.05
CAPN1-214ENST00000528165 GBA3Q9H227 469 aa14.75□□□□□ -0.05
CAPN1-214ENST00000528165 UBP1Q9NZI7 540 aa14.75□□□□□ -0.05
CAPN1-214ENST00000528165 IFT80Q9P2H3 777 aaPredicted RBP14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms