RNA–Protein interactions for RNA: ENST00000527887.1

CAPN1-212, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 348 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-212ENST00000527887 AFMIDQ63HM1 303 aa14.34□□□□□ -0.11
CAPN1-212ENST00000527887 ERAP2Q6P179 960 aa14.34□□□□□ -0.11
CAPN1-212ENST00000527887 VPS36Q86VN1 386 aa14.34□□□□□ -0.11
CAPN1-212ENST00000527887 SDR16C5Q8N3Y7 309 aa14.34□□□□□ -0.11
CAPN1-212ENST00000527887 ZNF548Q8NEK5 533 aaPredicted RBP14.34□□□□□ -0.11
CAPN1-212ENST00000527887 SYN2Q92777 582 aaPredicted RBP14.34□□□□□ -0.11
CAPN1-212ENST00000527887 GLMNQ92990 594 aa14.34□□□□□ -0.11
CAPN1-212ENST00000527887 GRAMD1AQ96CP6 724 aa14.34□□□□□ -0.11
CAPN1-212ENST00000527887 APOLD1Q96LR9 279 aa14.34□□□□□ -0.11
CAPN1-212ENST00000527887 NAP1L5Q96NT1 182 aaPredicted RBP14.34□□□□□ -0.11
CAPN1-212ENST00000527887 SNRNP25Q9BV90 132 aaKnown RBP14.34□□□□□ -0.11
CAPN1-212ENST00000527887 SLC39A8Q9C0K1 460 aa14.34□□□□□ -0.11
CAPN1-212ENST00000527887 ATP13A3Q9H7F0 1226 aa14.34□□□□□ -0.11
CAPN1-212ENST00000527887 ZWILCHQ9H900 591 aa14.34□□□□□ -0.11
CAPN1-212ENST00000527887 PCSK1NQ9UHG2 260 aa14.34□□□□□ -0.11
CAPN1-212ENST00000527887 ITM2BQ9Y287 266 aa14.34□□□□□ -0.11
CAPN1-212ENST00000527887 PTPRBP23467 1997 aa14.34□□□□□ -0.11
CAPN1-212ENST00000527887 CHD5Q8TDI0 1954 aa14.33□□□□□ -0.12
CAPN1-212ENST00000527887 GOLGA4Q13439 2230 aaKnown RBP14.33□□□□□ -0.12
CAPN1-212ENST00000527887 A0A1W2PQJ5 194 aa14.33□□□□□ -0.12
CAPN1-212ENST00000527887 J3KR12 359 aa14.33□□□□□ -0.12
CAPN1-212ENST00000527887 CBFA2T2O43439 604 aa14.33□□□□□ -0.12
CAPN1-212ENST00000527887 MMP20O60882 483 aa14.33□□□□□ -0.12
CAPN1-212ENST00000527887 PALMO75781 387 aa14.33□□□□□ -0.12
CAPN1-212ENST00000527887 ERCC2P18074 760 aa14.33□□□□□ -0.12
CAPN1-212ENST00000527887 SERPINA4P29622 427 aa14.33□□□□□ -0.12
CAPN1-212ENST00000527887 RPIAP49247 311 aa14.33□□□□□ -0.12
CAPN1-212ENST00000527887 RENBPP51606 427 aa14.33□□□□□ -0.12
CAPN1-212ENST00000527887 POLR2LP62875 67 aaKnown RBP14.33□□□□□ -0.12
CAPN1-212ENST00000527887 IL10RBQ08334 325 aa14.33□□□□□ -0.12
CAPN1-212ENST00000527887 LRRC14Q15048 493 aa14.33□□□□□ -0.12
CAPN1-212ENST00000527887 ZNF542PQ5EBM4 170 aa14.33□□□□□ -0.12
CAPN1-212ENST00000527887 MACC1Q6ZN28 852 aa14.33□□□□□ -0.12
CAPN1-212ENST00000527887 ARFGAP1Q8N6T3 406 aa14.33□□□□□ -0.12
CAPN1-212ENST00000527887 TP53I13Q8NBR0 393 aaPredicted RBP14.33□□□□□ -0.12
CAPN1-212ENST00000527887 ATL2Q8NHH9 583 aa14.33□□□□□ -0.12
CAPN1-212ENST00000527887 TPCN2Q8NHX9 752 aa14.33□□□□□ -0.12
CAPN1-212ENST00000527887 ZNF653Q96CK0 615 aa14.33□□□□□ -0.12
CAPN1-212ENST00000527887 ZNF599Q96NL3 588 aa14.33□□□□□ -0.12
CAPN1-212ENST00000527887 IL12RB2Q99665 862 aa14.33□□□□□ -0.12
CAPN1-212ENST00000527887 GGT7Q9UJ14 662 aa14.33□□□□□ -0.12
CAPN1-212ENST00000527887 AK5Q9Y6K8 562 aa14.33□□□□□ -0.12
CAPN1-212ENST00000527887 ARID1BQ8NFD5 2236 aaPredicted RBP14.32□□□□□ -0.12
CAPN1-212ENST00000527887 A0A1W2PQ67 120 aa14.32□□□□□ -0.12
CAPN1-212ENST00000527887 LMO7DNF2Z398 122 aa14.32□□□□□ -0.12
CAPN1-212ENST00000527887 OPA1O60313 960 aa14.32□□□□□ -0.12
CAPN1-212ENST00000527887 LRCH4O75427 683 aa14.32□□□□□ -0.12
CAPN1-212ENST00000527887 TPM3P06753 285 aa14.32□□□□□ -0.12
CAPN1-212ENST00000527887 HTR1BP28222 390 aa14.32□□□□□ -0.12
CAPN1-212ENST00000527887 IGFALSP35858 605 aa14.32□□□□□ -0.12
CAPN1-212ENST00000527887 EIF2B5Q13144 721 aaKnown RBP14.32□□□□□ -0.12
CAPN1-212ENST00000527887 PIGHQ14442 188 aaPredicted RBP14.32□□□□□ -0.12
CAPN1-212ENST00000527887 CA9Q16790 459 aa14.32□□□□□ -0.12
CAPN1-212ENST00000527887 CDCP2Q5VXM1 449 aa14.32□□□□□ -0.12
CAPN1-212ENST00000527887 SRLQ86TD4 932 aa14.32□□□□□ -0.12
CAPN1-212ENST00000527887 CELF6Q96J87 481 aaKnown RBP14.32□□□□□ -0.12
CAPN1-212ENST00000527887 DEPDC7Q96QD5 511 aa14.32□□□□□ -0.12
CAPN1-212ENST00000527887 PEBP4Q96S96 227 aa14.32□□□□□ -0.12
CAPN1-212ENST00000527887 KCTD15Q96SI1 283 aaPredicted RBP14.32□□□□□ -0.12
CAPN1-212ENST00000527887 CINPQ9BW66 212 aaPredicted RBP14.32□□□□□ -0.12
CAPN1-212ENST00000527887 SLC13A1Q9BZW2 595 aa14.32□□□□□ -0.12
CAPN1-212ENST00000527887 TRIM5Q9C035 493 aa14.32□□□□□ -0.12
CAPN1-212ENST00000527887 ABCG4Q9H172 646 aa14.32□□□□□ -0.12
CAPN1-212ENST00000527887 SP110Q9HB58 689 aa14.32□□□□□ -0.12
CAPN1-212ENST00000527887 PCDH12Q9NPG4 1184 aa14.32□□□□□ -0.12
CAPN1-212ENST00000527887 GPATCH2LQ9NWQ4 482 aa14.32□□□□□ -0.12
CAPN1-212ENST00000527887 APOBEC3BQ9UH17 382 aaKnown RBP14.32□□□□□ -0.12
CAPN1-212ENST00000527887 KLF15Q9UIH9 416 aa14.32□□□□□ -0.12
CAPN1-212ENST00000527887 TRPM6Q9BX84 2022 aa14.31□□□□□ -0.12
CAPN1-212ENST00000527887 EME2A4GXA9 379 aaPredicted RBP14.31□□□□□ -0.12
CAPN1-212ENST00000527887 H3BRJ5 948 aa14.31□□□□□ -0.12
CAPN1-212ENST00000527887 INSIG1O15503 277 aa14.31□□□□□ -0.12
CAPN1-212ENST00000527887 RRP8O43159 456 aaKnown RBP14.31□□□□□ -0.12
CAPN1-212ENST00000527887 ATMINO43313 823 aaPredicted RBP14.31□□□□□ -0.12
CAPN1-212ENST00000527887 LZTS3O60299 673 aaPredicted RBP14.31□□□□□ -0.12
CAPN1-212ENST00000527887 ACTN2P35609 894 aa14.31□□□□□ -0.12
CAPN1-212ENST00000527887 HSPA9P38646 679 aaKnown RBP14.31□□□□□ -0.12
CAPN1-212ENST00000527887 EIF4A3P38919 411 aaKnown RBP14.31□□□□□ -0.12
CAPN1-212ENST00000527887 ARL4AP40617 200 aa14.31□□□□□ -0.12
CAPN1-212ENST00000527887 ZNF75DP51815 510 aa14.31□□□□□ -0.12
CAPN1-212ENST00000527887 PPARDQ03181 441 aa14.31□□□□□ -0.12
CAPN1-212ENST00000527887 BCL2L1Q07817 233 aa14.31□□□□□ -0.12
CAPN1-212ENST00000527887 DPYSL2Q16555 572 aa14.31□□□□□ -0.12
CAPN1-212ENST00000527887 COL28A1Q2UY09 1125 aa14.31□□□□□ -0.12
CAPN1-212ENST00000527887 PPP6R3Q5H9R7 873 aaPredicted RBP14.31□□□□□ -0.12
CAPN1-212ENST00000527887 E4F1Q66K89 784 aaPredicted RBP14.31□□□□□ -0.12
CAPN1-212ENST00000527887 LVRNQ6Q4G3 990 aa14.31□□□□□ -0.12
CAPN1-212ENST00000527887 C19orf48Q6RUI8 117 aa14.31□□□□□ -0.12
CAPN1-212ENST00000527887 LRRC69Q6ZNQ3 347 aa14.31□□□□□ -0.12
CAPN1-212ENST00000527887 CYP4V2Q6ZWL3 525 aaPredicted RBP14.31□□□□□ -0.12
CAPN1-212ENST00000527887 ARHGAP12Q8IWW6 846 aa14.31□□□□□ -0.12
CAPN1-212ENST00000527887 PHACTR4Q8IZ21 702 aa14.31□□□□□ -0.12
CAPN1-212ENST00000527887 LSMEM2Q8N112 164 aa14.31□□□□□ -0.12
CAPN1-212ENST00000527887 FSTL5Q8N475 847 aaPredicted RBP14.31□□□□□ -0.12
CAPN1-212ENST00000527887 TSEN2Q8NCE0 465 aaKnown RBP14.31□□□□□ -0.12
CAPN1-212ENST00000527887 SNIP1Q8TAD8 396 aaKnown RBP14.31□□□□□ -0.12
CAPN1-212ENST00000527887 WDR48Q8TAF3 677 aa14.31□□□□□ -0.12
CAPN1-212ENST00000527887 LMX1AQ8TE12 382 aa14.31□□□□□ -0.12
CAPN1-212ENST00000527887 HNRNPLLQ8WVV9 542 aaKnown RBP14.31□□□□□ -0.12
CAPN1-212ENST00000527887 SCG3Q8WXD2 468 aaKnown RBP14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms