RNA–Protein interactions for RNA: ENST00000526954.5

CAPN1-205, Transcript of calpain 1, humanhuman

TSL 5

Gene CAPN1, Length 754 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-205ENST00000526954 TRIB3Q96RU7 358 aa16.66■□□□□ 0.26
CAPN1-205ENST00000526954 ITM2CQ9NQX7 267 aa16.66■□□□□ 0.26
CAPN1-205ENST00000526954 DYRK4Q9NR20 520 aa16.66■□□□□ 0.26
CAPN1-205ENST00000526954 UBP1Q9NZI7 540 aa16.66■□□□□ 0.26
CAPN1-205ENST00000526954 USP36Q9P275 1121 aaKnown RBP16.66■□□□□ 0.26
CAPN1-205ENST00000526954 BCCIPQ9P287 314 aaKnown RBP eCLIP16.66■□□□□ 0.26
CAPN1-205ENST00000526954 FBXO4Q9UKT5 387 aa16.66■□□□□ 0.26
CAPN1-205ENST00000526954 PHTF1Q9UMS5 762 aa16.66■□□□□ 0.26
CAPN1-205ENST00000526954 PPIL1Q9Y3C6 166 aa16.66■□□□□ 0.26
CAPN1-205ENST00000526954 EML5Q05BV3 1969 aa16.66■□□□□ 0.26
CAPN1-205ENST00000526954 C16orf96A6NNT2 1141 aa16.65■□□□□ 0.26
CAPN1-205ENST00000526954 F5H423 210 aaPredicted RBP16.65■□□□□ 0.26
CAPN1-205ENST00000526954 RAD51CO43502 376 aa16.65■□□□□ 0.26
CAPN1-205ENST00000526954 ZNF217O75362 1048 aa16.65■□□□□ 0.26
CAPN1-205ENST00000526954 PMPCBO75439 489 aa16.65■□□□□ 0.26
CAPN1-205ENST00000526954 AP2A1O95782 977 aa16.65■□□□□ 0.26
CAPN1-205ENST00000526954 PDHA1P08559 390 aa16.65■□□□□ 0.26
CAPN1-205ENST00000526954 TIMP2P16035 220 aa16.65■□□□□ 0.26
CAPN1-205ENST00000526954 ADRA1AP35348 466 aa16.65■□□□□ 0.26
CAPN1-205ENST00000526954 MAGEA6P43360 314 aa16.65■□□□□ 0.26
CAPN1-205ENST00000526954 TPMTP51580 245 aa16.65■□□□□ 0.26
CAPN1-205ENST00000526954 SUOXP51687 545 aa16.65■□□□□ 0.26
CAPN1-205ENST00000526954 POLR2LP62875 67 aaKnown RBP16.65■□□□□ 0.26
CAPN1-205ENST00000526954 CCDC15Q0P6D6 951 aa16.65■□□□□ 0.26
CAPN1-205ENST00000526954 CNTN1Q12860 1018 aa16.65■□□□□ 0.26
CAPN1-205ENST00000526954 CFAP58Q5T655 872 aa16.65■□□□□ 0.26
CAPN1-205ENST00000526954 FAXCQ5TGI0 409 aa16.65■□□□□ 0.26
CAPN1-205ENST00000526954 ERN2Q76MJ5 926 aaKnown RBP16.65■□□□□ 0.26
CAPN1-205ENST00000526954 PARS2Q7L3T8 475 aaKnown RBP16.65■□□□□ 0.26
CAPN1-205ENST00000526954 ZSWIM9Q86XI8 627 aa16.65■□□□□ 0.26
CAPN1-205ENST00000526954 PGBD3Q8N328 593 aa16.65■□□□□ 0.26
CAPN1-205ENST00000526954 HDDC3Q8N4P3 179 aa16.65■□□□□ 0.26
CAPN1-205ENST00000526954 PDCD7Q8N8D1 485 aaKnown RBP16.65■□□□□ 0.26
CAPN1-205ENST00000526954 PIH1D2Q8WWB5 315 aa16.65■□□□□ 0.26
CAPN1-205ENST00000526954 EIF2B3Q9NR50 452 aaKnown RBP16.65■□□□□ 0.26
CAPN1-205ENST00000526954 FBXL12Q9NXK8 326 aa16.65■□□□□ 0.26
CAPN1-205ENST00000526954 FZD4Q9ULV1 537 aa16.65■□□□□ 0.26
CAPN1-205ENST00000526954 CHKBQ9Y259 395 aa16.65■□□□□ 0.26
CAPN1-205ENST00000526954 PCDHB9Q9Y5E1 797 aa16.65■□□□□ 0.26
CAPN1-205ENST00000526954 A0A1W2PP55 124 aa16.64■□□□□ 0.25
CAPN1-205ENST00000526954 SLC7A4O43246 635 aa16.64■□□□□ 0.25
CAPN1-205ENST00000526954 SUN1O94901 812 aa16.64■□□□□ 0.25
CAPN1-205ENST00000526954 NDST3O95803 873 aa16.64■□□□□ 0.25
CAPN1-205ENST00000526954 CPP00450 1065 aa16.64■□□□□ 0.25
CAPN1-205ENST00000526954 IVDP26440 423 aa16.64■□□□□ 0.25
CAPN1-205ENST00000526954 P2RY2P41231 377 aa16.64■□□□□ 0.25
CAPN1-205ENST00000526954 VPS41P49754 854 aa16.64■□□□□ 0.25
CAPN1-205ENST00000526954 NEK3P51956 506 aa16.64■□□□□ 0.25
CAPN1-205ENST00000526954 PCSK7Q16549 785 aa16.64■□□□□ 0.25
CAPN1-205ENST00000526954 UGP2Q16851 508 aa16.64■□□□□ 0.25
CAPN1-205ENST00000526954 KCTD19Q17RG1 926 aaPredicted RBP16.64■□□□□ 0.25
CAPN1-205ENST00000526954 POM121L1PQ3SYA9 428 aa16.64■□□□□ 0.25
CAPN1-205ENST00000526954 AGBL4Q5VU57 503 aa16.64■□□□□ 0.25
CAPN1-205ENST00000526954 RANBP10Q6VN20 620 aa16.64■□□□□ 0.25
CAPN1-205ENST00000526954 CACUL1Q86Y37 369 aa16.64■□□□□ 0.25
CAPN1-205ENST00000526954 TAB3Q8N5C8 712 aaPredicted RBP16.64■□□□□ 0.25
CAPN1-205ENST00000526954 NOA1Q8NC60 698 aaKnown RBP16.64■□□□□ 0.25
CAPN1-205ENST00000526954 IPMKQ8NFU5 416 aa16.64■□□□□ 0.25
CAPN1-205ENST00000526954 PDCD6IPQ8WUM4 868 aaKnown RBP16.64■□□□□ 0.25
CAPN1-205ENST00000526954 RAB7BQ96AH8 199 aa16.64■□□□□ 0.25
CAPN1-205ENST00000526954 LRRC45Q96CN5 670 aa16.64■□□□□ 0.25
CAPN1-205ENST00000526954 IFT43Q96FT9 208 aa16.64■□□□□ 0.25
CAPN1-205ENST00000526954 OMDQ99983 421 aa16.64■□□□□ 0.25
CAPN1-205ENST00000526954 ADGRE3Q9BY15 652 aa16.64■□□□□ 0.25
CAPN1-205ENST00000526954 LRRC40Q9H9A6 602 aa16.64■□□□□ 0.25
CAPN1-205ENST00000526954 SERGEFQ9UGK8 458 aa16.64■□□□□ 0.25
CAPN1-205ENST00000526954 ASIC3Q9UHC3 531 aa16.64■□□□□ 0.25
CAPN1-205ENST00000526954 NCKAP1Q9Y2A7 1128 aa16.64■□□□□ 0.25
CAPN1-205ENST00000526954 UPK3BL1B0FP48 263 aa16.63■□□□□ 0.25
CAPN1-205ENST00000526954 ANKRD66B4E2M5 251 aa16.63■□□□□ 0.25
CAPN1-205ENST00000526954 UPK3BL2E5RIL1 263 aa16.63■□□□□ 0.25
CAPN1-205ENST00000526954 E7EVH7 732 aa16.63■□□□□ 0.25
CAPN1-205ENST00000526954 AXIN1O15169 862 aa16.63■□□□□ 0.25
CAPN1-205ENST00000526954 ADRB3P13945 408 aa16.63■□□□□ 0.25
CAPN1-205ENST00000526954 HLA-DPA1P20036 260 aa16.63■□□□□ 0.25
CAPN1-205ENST00000526954 TPSB2P20231 275 aa16.63■□□□□ 0.25
CAPN1-205ENST00000526954 ADCY8P40145 1251 aa16.63■□□□□ 0.25
CAPN1-205ENST00000526954 BASP1P80723 227 aaKnown RBP16.63■□□□□ 0.25
CAPN1-205ENST00000526954 CDK16Q00536 496 aa16.63■□□□□ 0.25
CAPN1-205ENST00000526954 KCNJ11Q14654 390 aa16.63■□□□□ 0.25
CAPN1-205ENST00000526954 TPSAB1Q15661 275 aa16.63■□□□□ 0.25
CAPN1-205ENST00000526954 ZNF528Q3MIS6 628 aa16.63■□□□□ 0.25
CAPN1-205ENST00000526954 GLE1Q53GS7 698 aaKnown RBP16.63■□□□□ 0.25
CAPN1-205ENST00000526954 PIP5KL1Q5T9C9 394 aa16.63■□□□□ 0.25
CAPN1-205ENST00000526954 FBXL19Q6PCT2 694 aa16.63■□□□□ 0.25
CAPN1-205ENST00000526954 TTC7BQ86TV6 843 aa16.63■□□□□ 0.25
CAPN1-205ENST00000526954 WDR5BQ86VZ2 330 aa16.63■□□□□ 0.25
CAPN1-205ENST00000526954 NELL1Q92832 810 aa16.63■□□□□ 0.25
CAPN1-205ENST00000526954 ERP44Q9BS26 406 aa16.63■□□□□ 0.25
CAPN1-205ENST00000526954 TRIM51Q9BSJ1 452 aa16.63■□□□□ 0.25
CAPN1-205ENST00000526954 LRRC1Q9BTT6 524 aa16.63■□□□□ 0.25
CAPN1-205ENST00000526954 FSD1LQ9BXM9 530 aa16.63■□□□□ 0.25
CAPN1-205ENST00000526954 FAM126AQ9BYI3 521 aaPredicted RBP16.63■□□□□ 0.25
CAPN1-205ENST00000526954 NEUROG2Q9H2A3 272 aa16.63■□□□□ 0.25
CAPN1-205ENST00000526954 ARNT2Q9HBZ2 717 aa16.63■□□□□ 0.25
CAPN1-205ENST00000526954 ZNF318Q5VUA4 2279 aa16.63■□□□□ 0.25
CAPN1-205ENST00000526954 PLK4O00444 970 aa16.62■□□□□ 0.25
CAPN1-205ENST00000526954 DNALI1O14645 258 aaPredicted RBP16.62■□□□□ 0.25
CAPN1-205ENST00000526954 AREL1O15033 823 aa16.62■□□□□ 0.25
CAPN1-205ENST00000526954 AP1G1O43747 822 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms