RNA–Protein interactions for RNA: ENST00000524922.1

CD44-212, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 352 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-212ENST00000524922 TNFSF8P32971 234 aa1.85□□□□□ -2.11
CD44-212ENST00000524922 CIITAP33076 1130 aa1.85□□□□□ -2.11
CD44-212ENST00000524922 STT3AP46977 705 aa1.85□□□□□ -2.11
CD44-212ENST00000524922 COMPP49747 757 aaPredicted RBP1.85□□□□□ -2.11
CD44-212ENST00000524922 ADPRHP54922 357 aa1.85□□□□□ -2.11
CD44-212ENST00000524922 ZP1P60852 638 aa1.85□□□□□ -2.11
CD44-212ENST00000524922 TLE3Q04726 772 aa1.85□□□□□ -2.11
CD44-212ENST00000524922 POU5F1BQ06416 359 aa1.85□□□□□ -2.11
CD44-212ENST00000524922 GRSF1Q12849 480 aaKnown RBP eCLIP1.85□□□□□ -2.11
CD44-212ENST00000524922 COASYQ13057 564 aa1.85□□□□□ -2.11
CD44-212ENST00000524922 PMS2P11Q13670 270 aa1.85□□□□□ -2.11
CD44-212ENST00000524922 RAB30Q15771 203 aa1.85□□□□□ -2.11
CD44-212ENST00000524922 SLC35G1Q2M3R5 365 aa1.85□□□□□ -2.11
CD44-212ENST00000524922 DCAF12L2Q5VW00 463 aa1.85□□□□□ -2.11
CD44-212ENST00000524922 ATG9BQ674R7 924 aa1.85□□□□□ -2.11
CD44-212ENST00000524922 SULT6B1Q6IMI4 303 aa1.85□□□□□ -2.11
CD44-212ENST00000524922 WDR93Q6P2C0 686 aa1.85□□□□□ -2.11
CD44-212ENST00000524922 TMEM71Q6P5X7 295 aa1.85□□□□□ -2.11
CD44-212ENST00000524922 BEND5Q7L4P6 421 aa1.85□□□□□ -2.11
CD44-212ENST00000524922 FASTKD5Q7L8L6 764 aaKnown RBP1.85□□□□□ -2.11
CD44-212ENST00000524922 DGKHQ86XP1 1220 aa1.85□□□□□ -2.11
CD44-212ENST00000524922 CADM3Q8N126 398 aa1.85□□□□□ -2.11
CD44-212ENST00000524922 MUC20Q8N307 709 aaPredicted RBP1.85□□□□□ -2.11
CD44-212ENST00000524922 SLC25A41Q8N5S1 370 aa1.85□□□□□ -2.11
CD44-212ENST00000524922 TDRD7Q8NHU6 1098 aaKnown RBP1.85□□□□□ -2.11
CD44-212ENST00000524922 GRAMD1AQ96CP6 724 aa1.85□□□□□ -2.11
CD44-212ENST00000524922 POLDIP3Q9BY77 421 aaKnown RBP1.85□□□□□ -2.11
CD44-212ENST00000524922 LDHAL6BQ9BYZ2 381 aaPredicted RBP1.85□□□□□ -2.11
CD44-212ENST00000524922 XRN2Q9H0D6 950 aaKnown RBP eCLIP1.85□□□□□ -2.11
CD44-212ENST00000524922 OSBPL5Q9H0X9 879 aaPredicted RBP1.85□□□□□ -2.11
CD44-212ENST00000524922 KLHL31Q9H511 634 aa1.85□□□□□ -2.11
CD44-212ENST00000524922 C6orf106Q9H6K1 298 aaPredicted RBP1.85□□□□□ -2.11
CD44-212ENST00000524922 SFXN1Q9H9B4 322 aa1.85□□□□□ -2.11
CD44-212ENST00000524922 NECTIN3Q9NQS3 549 aa1.85□□□□□ -2.11
CD44-212ENST00000524922 RNF146Q9NTX7 359 aa1.85□□□□□ -2.11
CD44-212ENST00000524922 FBXO28Q9NVF7 368 aa1.85□□□□□ -2.11
CD44-212ENST00000524922 FBXO4Q9UKT5 387 aa1.85□□□□□ -2.11
CD44-212ENST00000524922 CA14Q9ULX7 337 aa1.85□□□□□ -2.11
CD44-212ENST00000524922 NAV2Q8IVL1 2488 aa1.85□□□□□ -2.11
CD44-212ENST00000524922 WDR87Q6ZQQ6 2873 aa1.85□□□□□ -2.11
CD44-212ENST00000524922 KIF26BQ2KJY2 2108 aa1.85□□□□□ -2.11
CD44-212ENST00000524922 CLSPNQ9HAW4 1339 aa1.85□□□□□ -2.11
CD44-212ENST00000524922 FANCIQ9NVI1 1328 aa1.85□□□□□ -2.11
CD44-212ENST00000524922 BPTFQ12830 3046 aa1.85□□□□□ -2.11
CD44-212ENST00000524922 PTPN13Q12923 2485 aa1.84□□□□□ -2.11
CD44-212ENST00000524922 ZFYVE26Q68DK2 2539 aa1.84□□□□□ -2.11
CD44-212ENST00000524922 EP300Q09472 2414 aaPredicted RBP1.84□□□□□ -2.11
CD44-212ENST00000524922 CCL15-CCL14A0A0B4J2E2 113 aa1.84□□□□□ -2.11
CD44-212ENST00000524922 MCIDASD6RGH6 385 aa1.84□□□□□ -2.11
CD44-212ENST00000524922 DNM1LO00429 736 aa1.84□□□□□ -2.11
CD44-212ENST00000524922 GRID2O43424 1007 aa1.84□□□□□ -2.11
CD44-212ENST00000524922 NCK2O43639 380 aa1.84□□□□□ -2.11
CD44-212ENST00000524922 PQBP1O60828 265 aaKnown RBP1.84□□□□□ -2.11
CD44-212ENST00000524922 RPP40O75818 363 aaKnown RBP1.84□□□□□ -2.11
CD44-212ENST00000524922 FGF18O76093 207 aa1.84□□□□□ -2.11
CD44-212ENST00000524922 NFATC1O95644 943 aa1.84□□□□□ -2.11
CD44-212ENST00000524922 GLUD1P00367 558 aa1.84□□□□□ -2.11
CD44-212ENST00000524922 S100BP04271 92 aaPredicted RBP1.84□□□□□ -2.11
CD44-212ENST00000524922 ANXA6P08133 673 aa1.84□□□□□ -2.11
CD44-212ENST00000524922 HARSP12081 509 aaKnown RBP1.84□□□□□ -2.11
CD44-212ENST00000524922 KRTAP5-9P26371 169 aa1.84□□□□□ -2.11
CD44-212ENST00000524922 HOXD3P31249 432 aaPredicted RBP1.84□□□□□ -2.11
CD44-212ENST00000524922 PSMC4P43686 418 aa1.84□□□□□ -2.11
CD44-212ENST00000524922 GLUD2P49448 558 aa1.84□□□□□ -2.11
CD44-212ENST00000524922 SEC61A1P61619 476 aaKnown RBP1.84□□□□□ -2.11
CD44-212ENST00000524922 RPS8P62241 208 aaKnown RBP1.84□□□□□ -2.11
CD44-212ENST00000524922 EEF1A2Q05639 463 aaKnown RBP1.84□□□□□ -2.11
CD44-212ENST00000524922 PMPCAQ10713 525 aa1.84□□□□□ -2.11
CD44-212ENST00000524922 CBFBQ13951 182 aa1.84□□□□□ -2.11
CD44-212ENST00000524922 GPR18Q14330 331 aa1.84□□□□□ -2.11
CD44-212ENST00000524922 CCL15Q16663 113 aa1.84□□□□□ -2.11
CD44-212ENST00000524922 MTHFSDQ2M296 383 aaKnown RBP1.84□□□□□ -2.11
CD44-212ENST00000524922 ZNF284Q2VY69 593 aa1.84□□□□□ -2.11
CD44-212ENST00000524922 PRAMEF19Q5SWL8 479 aa1.84□□□□□ -2.11
CD44-212ENST00000524922 FNBP1LQ5T0N5 605 aa1.84□□□□□ -2.11
CD44-212ENST00000524922 VWA5B1Q5TIE3 1220 aa1.84□□□□□ -2.11
CD44-212ENST00000524922 SUSD4Q5VX71 490 aa1.84□□□□□ -2.11
CD44-212ENST00000524922 HIST2H2BCQ6DN03 193 aa1.84□□□□□ -2.11
CD44-212ENST00000524922 TMED8Q6PL24 325 aaPredicted RBP1.84□□□□□ -2.11
CD44-212ENST00000524922 OLFM4Q6UX06 510 aa1.84□□□□□ -2.11
CD44-212ENST00000524922 CYB5R4Q7L1T6 521 aa1.84□□□□□ -2.11
CD44-212ENST00000524922 ZNF771Q7L3S4 317 aaPredicted RBP1.84□□□□□ -2.11
CD44-212ENST00000524922 ZNF367Q7RTV3 350 aa1.84□□□□□ -2.11
CD44-212ENST00000524922 TRABD2AQ86V40 505 aa1.84□□□□□ -2.11
CD44-212ENST00000524922 RASGRP3Q8IV61 690 aa1.84□□□□□ -2.11
CD44-212ENST00000524922 SRFBP1Q8NEF9 429 aaKnown RBP1.84□□□□□ -2.11
CD44-212ENST00000524922 IL17REQ8NFR9 667 aa1.84□□□□□ -2.11
CD44-212ENST00000524922 FAM110DQ8TAY7 271 aaPredicted RBP1.84□□□□□ -2.11
CD44-212ENST00000524922 BICD2Q8TD16 824 aa1.84□□□□□ -2.11
CD44-212ENST00000524922 CLEC4CQ8WTT0 213 aa1.84□□□□□ -2.11
CD44-212ENST00000524922 OPTNQ96CV9 577 aa1.84□□□□□ -2.11
CD44-212ENST00000524922 C18orf8Q96DM3 657 aa1.84□□□□□ -2.11
CD44-212ENST00000524922 FAR2Q96K12 515 aa1.84□□□□□ -2.11
CD44-212ENST00000524922 ADAD1Q96M93 576 aaKnown RBP1.84□□□□□ -2.11
CD44-212ENST00000524922 NPAS1Q99742 590 aa1.84□□□□□ -2.11
CD44-212ENST00000524922 NAA15Q9BXJ9 866 aaKnown RBP1.84□□□□□ -2.11
CD44-212ENST00000524922 TM6SF1Q9BZW5 370 aa1.84□□□□□ -2.11
CD44-212ENST00000524922 SPRY4Q9C004 299 aa1.84□□□□□ -2.11
CD44-212ENST00000524922 B3GNT4Q9C0J1 378 aa1.84□□□□□ -2.11
CD44-212ENST00000524922 ANKRD2Q9GZV1 360 aa1.84□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms