RNA–Protein interactions for RNA: ENST00000523768.5

TNPO1-213, Transcript of transportin 1, humanhuman

TSL 2 BASIC

Gene TNPO1, Length 2,632 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNPO1-213ENST00000523768 NT5MQ9NPB1 228 aa11.4□□□□□ -0.58
TNPO1-213ENST00000523768 SQORQ9Y6N5 450 aa11.4□□□□□ -0.58
TNPO1-213ENST00000523768 IGLV3-10A0A075B6K4 115 aa11.39□□□□□ -0.59
TNPO1-213ENST00000523768 TCAF2A6NFQ2 919 aa11.39□□□□□ -0.59
TNPO1-213ENST00000523768 SEPT4O43236 478 aa11.39□□□□□ -0.59
TNPO1-213ENST00000523768 SLC7A4O43246 635 aa11.39□□□□□ -0.59
TNPO1-213ENST00000523768 RNASEH1O60930 286 aaKnown RBP11.39□□□□□ -0.59
TNPO1-213ENST00000523768 IPO13O94829 963 aaKnown RBP11.39□□□□□ -0.59
TNPO1-213ENST00000523768 ASGR1P07306 291 aa11.39□□□□□ -0.59
TNPO1-213ENST00000523768 MMP2P08253 660 aa11.39□□□□□ -0.59
TNPO1-213ENST00000523768 RBP1P09455 135 aa11.39□□□□□ -0.59
TNPO1-213ENST00000523768 LTA4HP09960 611 aaKnown RBP11.39□□□□□ -0.59
TNPO1-213ENST00000523768 TBX4P57082 545 aa11.39□□□□□ -0.59
TNPO1-213ENST00000523768 TRIP10Q15642 601 aa11.39□□□□□ -0.59
TNPO1-213ENST00000523768 PSMD5Q16401 504 aa11.39□□□□□ -0.59
TNPO1-213ENST00000523768 GPR162Q16538 588 aa11.39□□□□□ -0.59
TNPO1-213ENST00000523768 LRRC36Q1X8D7 754 aa11.39□□□□□ -0.59
TNPO1-213ENST00000523768 ZNF789Q5FWF6 425 aa11.39□□□□□ -0.59
TNPO1-213ENST00000523768 MS4A13Q5J8X5 152 aa11.39□□□□□ -0.59
TNPO1-213ENST00000523768 MARC1Q5VT66 337 aa11.39□□□□□ -0.59
TNPO1-213ENST00000523768 ZNF280DQ6N043 979 aa11.39□□□□□ -0.59
TNPO1-213ENST00000523768 ZFP1Q6P2D0 407 aa11.39□□□□□ -0.59
TNPO1-213ENST00000523768 CHSY3Q70JA7 882 aa11.39□□□□□ -0.59
TNPO1-213ENST00000523768 TMEM126BQ8IUX1 230 aa11.39□□□□□ -0.59
TNPO1-213ENST00000523768 DCP1BQ8IZD4 617 aaKnown RBP11.39□□□□□ -0.59
TNPO1-213ENST00000523768 ARHGAP18Q8N392 663 aa11.39□□□□□ -0.59
TNPO1-213ENST00000523768 OR13J1Q8NGT2 312 aa11.39□□□□□ -0.59
TNPO1-213ENST00000523768 TRIB2Q92519 343 aa11.39□□□□□ -0.59
TNPO1-213ENST00000523768 TADA1Q96BN2 335 aa11.39□□□□□ -0.59
TNPO1-213ENST00000523768 HMCESQ96FZ2 354 aa11.39□□□□□ -0.59
TNPO1-213ENST00000523768 TUBGCP5Q96RT8 1024 aa11.39□□□□□ -0.59
TNPO1-213ENST00000523768 UNKQ9C0B0 810 aaKnown RBP11.39□□□□□ -0.59
TNPO1-213ENST00000523768 FAM192AQ9GZU8 254 aa11.39□□□□□ -0.59
TNPO1-213ENST00000523768 FBXO44Q9H4M3 255 aa11.39□□□□□ -0.59
TNPO1-213ENST00000523768 WDR41Q9HAD4 459 aa11.39□□□□□ -0.59
TNPO1-213ENST00000523768 ABI2Q9NYB9 513 aaPredicted RBP11.39□□□□□ -0.59
TNPO1-213ENST00000523768 MRPL42Q9Y6G3 142 aaKnown RBP11.39□□□□□ -0.59
TNPO1-213ENST00000523768 NEMP2A6NFY4 417 aa11.39□□□□□ -0.59
TNPO1-213ENST00000523768 MROH6A6NGR9 719 aa11.39□□□□□ -0.59
TNPO1-213ENST00000523768 A8MT66 165 aa11.39□□□□□ -0.59
TNPO1-213ENST00000523768 TMEM233B4DJY2 109 aa11.39□□□□□ -0.59
TNPO1-213ENST00000523768 TMEM189-UBE2V1I3L0A0 370 aa11.39□□□□□ -0.59
TNPO1-213ENST00000523768 J3KR12 359 aa11.39□□□□□ -0.59
TNPO1-213ENST00000523768 MAP3K13O43283 966 aa11.39□□□□□ -0.59
TNPO1-213ENST00000523768 WISP3O95389 354 aaPredicted RBP11.39□□□□□ -0.59
TNPO1-213ENST00000523768 FESP07332 822 aa11.39□□□□□ -0.59
TNPO1-213ENST00000523768 AQP4P55087 323 aa11.39□□□□□ -0.59
TNPO1-213ENST00000523768 SULT2A1Q06520 285 aa11.39□□□□□ -0.59
TNPO1-213ENST00000523768 MED21Q13503 144 aa11.39□□□□□ -0.59
TNPO1-213ENST00000523768 ACAP2Q15057 778 aa11.39□□□□□ -0.59
TNPO1-213ENST00000523768 KLC3Q6P597 504 aa11.39□□□□□ -0.59
TNPO1-213ENST00000523768 SDCCAG8Q86SQ7 713 aaPredicted RBP11.39□□□□□ -0.59
TNPO1-213ENST00000523768 CILP2Q8IUL8 1156 aa11.39□□□□□ -0.59
TNPO1-213ENST00000523768 SGF29Q96ES7 293 aa11.39□□□□□ -0.59
TNPO1-213ENST00000523768 NDNQ99608 321 aa11.39□□□□□ -0.59
TNPO1-213ENST00000523768 MFSD1Q9H3U5 465 aa11.39□□□□□ -0.59
TNPO1-213ENST00000523768 EML4Q9HC35 981 aaKnown RBP11.39□□□□□ -0.59
TNPO1-213ENST00000523768 IL37Q9NZH6 218 aa11.39□□□□□ -0.59
TNPO1-213ENST00000523768 MYO16Q9Y6X6 1858 aa11.39□□□□□ -0.59
TNPO1-213ENST00000523768 TTC3P53804 2025 aa11.39□□□□□ -0.59
TNPO1-213ENST00000523768 HAPLN1P10915 354 aaPredicted RBP11.39□□□□□ -0.59
TNPO1-213ENST00000523768 VCLP18206 1134 aa11.39□□□□□ -0.59
TNPO1-213ENST00000523768 XRCC1P18887 633 aaPredicted RBP11.39□□□□□ -0.59
TNPO1-213ENST00000523768 SLC26A3P40879 764 aa11.39□□□□□ -0.59
TNPO1-213ENST00000523768 CD86P42081 329 aa11.39□□□□□ -0.59
TNPO1-213ENST00000523768 DPP6P42658 865 aa11.39□□□□□ -0.59
TNPO1-213ENST00000523768 INHBEP58166 350 aa11.39□□□□□ -0.59
TNPO1-213ENST00000523768 DSC1Q08554 894 aa11.39□□□□□ -0.59
TNPO1-213ENST00000523768 SLC10A7Q0GE19 358 aa11.39□□□□□ -0.59
TNPO1-213ENST00000523768 ILF2Q12905 390 aaKnown RBP11.39□□□□□ -0.59
TNPO1-213ENST00000523768 ART3Q13508 389 aa11.39□□□□□ -0.59
TNPO1-213ENST00000523768 CEACAM7Q14002 265 aa11.39□□□□□ -0.59
TNPO1-213ENST00000523768 FLOT2Q14254 428 aa11.39□□□□□ -0.59
TNPO1-213ENST00000523768 NFE2Q16621 373 aaPredicted RBP11.39□□□□□ -0.59
TNPO1-213ENST00000523768 TRIM71Q2Q1W2 868 aaKnown RBP11.39□□□□□ -0.59
TNPO1-213ENST00000523768 HECTD2Q5U5R9 776 aa11.39□□□□□ -0.59
TNPO1-213ENST00000523768 FOXB2Q5VYV0 432 aa11.39□□□□□ -0.59
TNPO1-213ENST00000523768 SLC22A9Q8IVM8 553 aa11.39□□□□□ -0.59
TNPO1-213ENST00000523768 AFAP1L2Q8N4X5 818 aa11.39□□□□□ -0.59
TNPO1-213ENST00000523768 SPPL2BQ8TCT7 592 aa11.39□□□□□ -0.59
TNPO1-213ENST00000523768 TSC22D3Q99576 134 aa11.39□□□□□ -0.59
TNPO1-213ENST00000523768 DDX50Q9BQ39 737 aaKnown RBP11.39□□□□□ -0.59
TNPO1-213ENST00000523768 MEAF6Q9HAF1 191 aa11.39□□□□□ -0.59
TNPO1-213ENST00000523768 UTP6Q9NYH9 597 aaKnown RBP11.39□□□□□ -0.59
TNPO1-213ENST00000523768 PACSIN3Q9UKS6 424 aa11.39□□□□□ -0.59
TNPO1-213ENST00000523768 PLXNA3P51805 1871 aa11.38□□□□□ -0.59
TNPO1-213ENST00000523768 AHCYL1O43865 530 aa11.38□□□□□ -0.59
TNPO1-213ENST00000523768 B4GALT3O60512 393 aa11.38□□□□□ -0.59
TNPO1-213ENST00000523768 SMIM24O75264 130 aa11.38□□□□□ -0.59
TNPO1-213ENST00000523768 PENKP01210 267 aaPredicted RBP11.38□□□□□ -0.59
TNPO1-213ENST00000523768 ZCCHC18P0CG32 403 aa11.38□□□□□ -0.59
TNPO1-213ENST00000523768 CCDC166P0CW27 439 aa11.38□□□□□ -0.59
TNPO1-213ENST00000523768 ENO3P13929 434 aaPredicted RBP11.38□□□□□ -0.59
TNPO1-213ENST00000523768 HNRNPLP14866 589 aaKnown RBP eCLIP11.38□□□□□ -0.59
TNPO1-213ENST00000523768 KCNA5P22460 613 aa11.38□□□□□ -0.59
TNPO1-213ENST00000523768 ME2P23368 584 aa11.38□□□□□ -0.59
TNPO1-213ENST00000523768 ALDH1A3P47895 512 aa11.38□□□□□ -0.59
TNPO1-213ENST00000523768 INHBCP55103 352 aa11.38□□□□□ -0.59
TNPO1-213ENST00000523768 MAXP61244 160 aa11.38□□□□□ -0.59
TNPO1-213ENST00000523768 IRX1P78414 480 aaPredicted RBP11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms