RNA–Protein interactions for RNA: ENST00000523387.5

CSMD1-212, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 2

Gene CSMD1, Length 3,989 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-212ENST00000523387 ZBTB24O43167 697 aaPredicted RBP9.09□□□□□ -0.95
CSMD1-212ENST00000523387 ASNA1O43681 348 aa9.09□□□□□ -0.95
CSMD1-212ENST00000523387 MSCO60682 206 aa9.09□□□□□ -0.95
CSMD1-212ENST00000523387 NADKO95544 446 aaPredicted RBP9.09□□□□□ -0.95
CSMD1-212ENST00000523387 AP2A1O95782 977 aa9.09□□□□□ -0.95
CSMD1-212ENST00000523387 IL5RAQ01344 420 aa9.09□□□□□ -0.95
CSMD1-212ENST00000523387 MAP1SQ66K74 1059 aaPredicted RBP9.09□□□□□ -0.95
CSMD1-212ENST00000523387 TMC5Q6UXY8 1006 aa9.09□□□□□ -0.95
CSMD1-212ENST00000523387 NAT16Q8N8M0 369 aa9.09□□□□□ -0.95
CSMD1-212ENST00000523387 CALML6Q8TD86 181 aa9.09□□□□□ -0.95
CSMD1-212ENST00000523387 ANKRD60Q9BZ19 345 aa9.09□□□□□ -0.95
CSMD1-212ENST00000523387 RBM38Q9H0Z9 239 aaKnown RBP9.09□□□□□ -0.95
CSMD1-212ENST00000523387 PARVBQ9HBI1 364 aa9.09□□□□□ -0.95
CSMD1-212ENST00000523387 EIF2B3Q9NR50 452 aaKnown RBP9.09□□□□□ -0.95
CSMD1-212ENST00000523387 H0YJX3 145 aa9.09□□□□□ -0.95
CSMD1-212ENST00000523387 H3BMQ9 156 aa9.09□□□□□ -0.95
CSMD1-212ENST00000523387 SNX2O60749 519 aa9.09□□□□□ -0.95
CSMD1-212ENST00000523387 ANXA9O76027 345 aa9.09□□□□□ -0.95
CSMD1-212ENST00000523387 PARNO95453 639 aaKnown RBP9.09□□□□□ -0.95
CSMD1-212ENST00000523387 BMXP51813 675 aa9.09□□□□□ -0.95
CSMD1-212ENST00000523387 RBBP7Q16576 425 aa9.09□□□□□ -0.95
CSMD1-212ENST00000523387 DGUOKQ16854 277 aa9.09□□□□□ -0.95
CSMD1-212ENST00000523387 LY6KQ17RY6 165 aa9.09□□□□□ -0.95
CSMD1-212ENST00000523387 RSBN1Q5VWQ0 802 aaPredicted RBP9.09□□□□□ -0.95
CSMD1-212ENST00000523387 CYS1Q717R9 158 aa9.09□□□□□ -0.95
CSMD1-212ENST00000523387 ZDHHC13Q8IUH4 622 aa9.09□□□□□ -0.95
CSMD1-212ENST00000523387 DENND6AQ8IWF6 608 aa9.09□□□□□ -0.95
CSMD1-212ENST00000523387 SLC15A4Q8N697 577 aa9.09□□□□□ -0.95
CSMD1-212ENST00000523387 ZNF280CQ8ND82 737 aa9.09□□□□□ -0.95
CSMD1-212ENST00000523387 PSMA8Q8TAA3 256 aa9.09□□□□□ -0.95
CSMD1-212ENST00000523387 SLC2A14Q8TDB8 520 aa9.09□□□□□ -0.95
CSMD1-212ENST00000523387 RAB2BQ8WUD1 216 aa9.09□□□□□ -0.95
CSMD1-212ENST00000523387 NDRG1Q92597 394 aaKnown RBP9.09□□□□□ -0.95
CSMD1-212ENST00000523387 RORBQ92753 470 aa9.09□□□□□ -0.95
CSMD1-212ENST00000523387 DCPSQ96C86 337 aaKnown RBP9.09□□□□□ -0.95
CSMD1-212ENST00000523387 CEP19Q96LK0 163 aa9.09□□□□□ -0.95
CSMD1-212ENST00000523387 COG8Q96MW5 612 aa9.09□□□□□ -0.95
CSMD1-212ENST00000523387 FCRL3Q96P31 734 aaPredicted RBP9.09□□□□□ -0.95
CSMD1-212ENST00000523387 C17orf80Q9BSJ5 609 aa9.09□□□□□ -0.95
CSMD1-212ENST00000523387 WDR12Q9GZL7 423 aaKnown RBP9.09□□□□□ -0.95
CSMD1-212ENST00000523387 OLAHQ9NV23 265 aa9.09□□□□□ -0.95
CSMD1-212ENST00000523387 SPATA7Q9P0W8 599 aa9.09□□□□□ -0.95
CSMD1-212ENST00000523387 NIPSNAP3AQ9UFN0 247 aaPredicted RBP9.09□□□□□ -0.95
CSMD1-212ENST00000523387 AAR2Q9Y312 384 aaKnown RBP9.09□□□□□ -0.95
CSMD1-212ENST00000523387 ST14Q9Y5Y6 855 aa9.09□□□□□ -0.95
CSMD1-212ENST00000523387 MTHFD1P11586 935 aaKnown RBP9.09□□□□□ -0.95
CSMD1-212ENST00000523387 CPB1P15086 417 aa9.09□□□□□ -0.95
CSMD1-212ENST00000523387 NCK1P16333 377 aa9.09□□□□□ -0.95
CSMD1-212ENST00000523387 ALDH3B2P48448 385 aa9.09□□□□□ -0.95
CSMD1-212ENST00000523387 TNK2Q07912 1038 aa9.09□□□□□ -0.95
CSMD1-212ENST00000523387 KYAT1Q16773 422 aa9.09□□□□□ -0.95
CSMD1-212ENST00000523387 PPP4R4Q6NUP7 873 aa9.09□□□□□ -0.95
CSMD1-212ENST00000523387 TMEM214Q6NUQ4 689 aaKnown RBP9.09□□□□□ -0.95
CSMD1-212ENST00000523387 NEPROQ6NW34 567 aa9.09□□□□□ -0.95
CSMD1-212ENST00000523387 GADL1Q6ZQY3 521 aa9.09□□□□□ -0.95
CSMD1-212ENST00000523387 RPS27LQ71UM5 84 aaKnown RBP9.09□□□□□ -0.95
CSMD1-212ENST00000523387 ZNF534Q76KX8 674 aa9.09□□□□□ -0.95
CSMD1-212ENST00000523387 NT5DC4Q86YG4 428 aa9.09□□□□□ -0.95
CSMD1-212ENST00000523387 TMEM130Q8N3G9 435 aa9.09□□□□□ -0.95
CSMD1-212ENST00000523387 GLT1D1Q96MS3 346 aa9.09□□□□□ -0.95
CSMD1-212ENST00000523387 ZBTB18Q99592 522 aa9.09□□□□□ -0.95
CSMD1-212ENST00000523387 OLFM1Q99784 485 aa9.09□□□□□ -0.95
CSMD1-212ENST00000523387 RPF2Q9H7B2 306 aaKnown RBP9.09□□□□□ -0.95
CSMD1-212ENST00000523387 CD320Q9NPF0 282 aa9.09□□□□□ -0.95
CSMD1-212ENST00000523387 HPS4Q9NQG7 708 aa9.09□□□□□ -0.95
CSMD1-212ENST00000523387 FBXO5Q9UKT4 447 aa9.09□□□□□ -0.95
CSMD1-212ENST00000523387 TRHDEQ9UKU6 1024 aa9.09□□□□□ -0.95
CSMD1-212ENST00000523387 ANKRD12Q6UB98 2062 aa9.09□□□□□ -0.95
CSMD1-212ENST00000523387 ATAD5Q96QE3 1844 aa9.08□□□□□ -0.96
CSMD1-212ENST00000523387 CROCCQ5TZA2 2017 aa9.08□□□□□ -0.96
CSMD1-212ENST00000523387 A0A087X1B8 175 aa9.08□□□□□ -0.96
CSMD1-212ENST00000523387 TCAF2A6NFQ2 919 aa9.08□□□□□ -0.96
CSMD1-212ENST00000523387 SDHDO14521 159 aa9.08□□□□□ -0.96
CSMD1-212ENST00000523387 GRID2O43424 1007 aa9.08□□□□□ -0.96
CSMD1-212ENST00000523387 CLPXO76031 633 aa9.08□□□□□ -0.96
CSMD1-212ENST00000523387 ALDH1A2O94788 518 aa9.08□□□□□ -0.96
CSMD1-212ENST00000523387 ALOX5P09917 674 aa9.08□□□□□ -0.96
CSMD1-212ENST00000523387 LTA4HP09960 611 aaKnown RBP9.08□□□□□ -0.96
CSMD1-212ENST00000523387 YWHAQP27348 245 aa9.08□□□□□ -0.96
CSMD1-212ENST00000523387 ARRB2P32121 409 aa9.08□□□□□ -0.96
CSMD1-212ENST00000523387 EMP3P54852 163 aa9.08□□□□□ -0.96
CSMD1-212ENST00000523387 MTA1Q13330 715 aa9.08□□□□□ -0.96
CSMD1-212ENST00000523387 FAM98BQ52LJ0 330 aaKnown RBP9.08□□□□□ -0.96
CSMD1-212ENST00000523387 SLC26A9Q7LBE3 791 aa9.08□□□□□ -0.96
CSMD1-212ENST00000523387 CARM1Q86X55 608 aa9.08□□□□□ -0.96
CSMD1-212ENST00000523387 PACRGLQ8N7B6 248 aa9.08□□□□□ -0.96
CSMD1-212ENST00000523387 PDPRQ8NCN5 879 aa9.08□□□□□ -0.96
CSMD1-212ENST00000523387 APPL2Q8NEU8 664 aa9.08□□□□□ -0.96
CSMD1-212ENST00000523387 HTRA1Q92743 480 aa9.08□□□□□ -0.96
CSMD1-212ENST00000523387 HOPXQ9BPY8 73 aaPredicted RBP9.08□□□□□ -0.96
CSMD1-212ENST00000523387 HEPHQ9BQS7 1158 aa9.08□□□□□ -0.96
CSMD1-212ENST00000523387 MRPL45Q9BRJ2 306 aaKnown RBP9.08□□□□□ -0.96
CSMD1-212ENST00000523387 RHOBTB2Q9BYZ6 727 aa9.08□□□□□ -0.96
CSMD1-212ENST00000523387 SCN3BQ9NY72 215 aa9.08□□□□□ -0.96
CSMD1-212ENST00000523387 VPS28Q9UK41 221 aa9.08□□□□□ -0.96
CSMD1-212ENST00000523387 C9IYK1 514 aa9.08□□□□□ -0.96
CSMD1-212ENST00000523387 GPR25O00155 361 aa9.08□□□□□ -0.96
CSMD1-212ENST00000523387 NCAM2O15394 837 aa9.08□□□□□ -0.96
CSMD1-212ENST00000523387 MFN2O95140 757 aa9.08□□□□□ -0.96
CSMD1-212ENST00000523387 SEC24AO95486 1093 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms