RNA–Protein interactions for RNA: ENST00000522371.5

HDAC2-213, Transcript of histone deacetylase 2, humanhuman

TSL 4

Gene HDAC2, Length 502 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC2-213ENST00000522371 ZKSCAN4Q969J2 545 aaPredicted RBP3.45□□□□□ -1.86
HDAC2-213ENST00000522371 PABPC5Q96DU9 382 aaKnown RBP3.45□□□□□ -1.86
HDAC2-213ENST00000522371 SAAL1Q96ER3 474 aa3.45□□□□□ -1.86
HDAC2-213ENST00000522371 SF3B5Q9BWJ5 86 aaKnown RBP3.45□□□□□ -1.86
HDAC2-213ENST00000522371 GLIS2Q9BZE0 524 aaPredicted RBP3.45□□□□□ -1.86
HDAC2-213ENST00000522371 LHPPQ9H008 270 aa3.45□□□□□ -1.86
HDAC2-213ENST00000522371 RBM38Q9H0Z9 239 aaKnown RBP3.45□□□□□ -1.86
HDAC2-213ENST00000522371 GHITMQ9H3K2 345 aa3.45□□□□□ -1.86
HDAC2-213ENST00000522371 POLR1BQ9H9Y6 1135 aa3.45□□□□□ -1.86
HDAC2-213ENST00000522371 ENTPD7Q9NQZ7 604 aa3.45□□□□□ -1.86
HDAC2-213ENST00000522371 DIAPH3Q9NSV4 1193 aa3.45□□□□□ -1.86
HDAC2-213ENST00000522371 ATP8A2Q9NTI2 1148 aa3.45□□□□□ -1.86
HDAC2-213ENST00000522371 PPP1R14DQ9NXH3 145 aa3.45□□□□□ -1.86
HDAC2-213ENST00000522371 HCN3Q9P1Z3 774 aa3.45□□□□□ -1.86
HDAC2-213ENST00000522371 TBC1D14Q9P2M4 693 aa3.45□□□□□ -1.86
HDAC2-213ENST00000522371 ADD3Q9UEY8 706 aaKnown RBP3.45□□□□□ -1.86
HDAC2-213ENST00000522371 TBC1D29Q9UFV1 150 aa3.45□□□□□ -1.86
HDAC2-213ENST00000522371 ZNF215Q9UL58 517 aaPredicted RBP3.45□□□□□ -1.86
HDAC2-213ENST00000522371 GPR34Q9UPC5 381 aa3.45□□□□□ -1.86
HDAC2-213ENST00000522371 LAS1LQ9Y4W2 734 aaKnown RBP3.45□□□□□ -1.86
HDAC2-213ENST00000522371 KCNE2Q9Y6J6 123 aa3.45□□□□□ -1.86
HDAC2-213ENST00000522371 SCINQ9Y6U3 715 aa3.45□□□□□ -1.86
HDAC2-213ENST00000522371 CAPN7Q9Y6W3 813 aa3.45□□□□□ -1.86
HDAC2-213ENST00000522371 ADGRF5Q8IZF2 1346 aa3.44□□□□□ -1.86
HDAC2-213ENST00000522371 KDM3AQ9Y4C1 1321 aa3.44□□□□□ -1.86
HDAC2-213ENST00000522371 GOLGA6L10A0A0M3HER8 536 aa3.44□□□□□ -1.86
HDAC2-213ENST00000522371 TYW5A2RUC4 315 aaKnown RBP3.44□□□□□ -1.86
HDAC2-213ENST00000522371 GAGE10A6NGK3 116 aa3.44□□□□□ -1.86
HDAC2-213ENST00000522371 LIASO43766 372 aa3.44□□□□□ -1.86
HDAC2-213ENST00000522371 AHCYL1O43865 530 aa3.44□□□□□ -1.86
HDAC2-213ENST00000522371 ATP2C2O75185 946 aa3.44□□□□□ -1.86
HDAC2-213ENST00000522371 DDX58O95786 925 aaKnown RBP3.44□□□□□ -1.86
HDAC2-213ENST00000522371 CLEC3BP05452 202 aa3.44□□□□□ -1.86
HDAC2-213ENST00000522371 CHRNB1P11230 501 aa3.44□□□□□ -1.86
HDAC2-213ENST00000522371 CHMP24386 653 aa3.44□□□□□ -1.86
HDAC2-213ENST00000522371 RFC1P35251 1148 aaPredicted RBP3.44□□□□□ -1.86
HDAC2-213ENST00000522371 PPARGP37231 505 aaPredicted RBP3.44□□□□□ -1.86
HDAC2-213ENST00000522371 CAPSQ13938 189 aa3.44□□□□□ -1.86
HDAC2-213ENST00000522371 PDE1CQ14123 709 aaPredicted RBP3.44□□□□□ -1.86
HDAC2-213ENST00000522371 TAF11Q15544 211 aa3.44□□□□□ -1.86
HDAC2-213ENST00000522371 COL28A1Q2UY09 1125 aa3.44□□□□□ -1.86
HDAC2-213ENST00000522371 KRTAP27-1Q3LI81 207 aa3.44□□□□□ -1.86
HDAC2-213ENST00000522371 PLK5Q496M5 336 aa3.44□□□□□ -1.86
HDAC2-213ENST00000522371 NAA35Q5VZE5 725 aa3.44□□□□□ -1.86
HDAC2-213ENST00000522371 HIST2H2BCQ6DN03 193 aa3.44□□□□□ -1.86
HDAC2-213ENST00000522371 HIST2H2BDQ6DRA6 164 aa3.44□□□□□ -1.86
HDAC2-213ENST00000522371 KLHL24Q6TFL4 600 aa3.44□□□□□ -1.86
HDAC2-213ENST00000522371 NEK10Q6ZWH5 1172 aa3.44□□□□□ -1.86
HDAC2-213ENST00000522371 USP43Q70EL4 1123 aa3.44□□□□□ -1.86
HDAC2-213ENST00000522371 FASTKD5Q7L8L6 764 aaKnown RBP3.44□□□□□ -1.86
HDAC2-213ENST00000522371 SLC46A3Q7Z3Q1 461 aa3.44□□□□□ -1.86
HDAC2-213ENST00000522371 WDR5BQ86VZ2 330 aa3.44□□□□□ -1.86
HDAC2-213ENST00000522371 DHX40Q8IX18 779 aaKnown RBP3.44□□□□□ -1.86
HDAC2-213ENST00000522371 CADM3Q8N126 398 aa3.44□□□□□ -1.86
HDAC2-213ENST00000522371 HORMAD2Q8N7B1 307 aa3.44□□□□□ -1.86
HDAC2-213ENST00000522371 CCDC89Q8N998 374 aa3.44□□□□□ -1.86
HDAC2-213ENST00000522371 NOC3LQ8WTT2 800 aaKnown RBP3.44□□□□□ -1.86
HDAC2-213ENST00000522371 USP6NLQ92738 828 aa3.44□□□□□ -1.86
HDAC2-213ENST00000522371 TIGD1Q96MW7 591 aa3.44□□□□□ -1.86
HDAC2-213ENST00000522371 NR1H4Q96RI1 486 aaPredicted RBP3.44□□□□□ -1.86
HDAC2-213ENST00000522371 BBS4Q96RK4 519 aa3.44□□□□□ -1.86
HDAC2-213ENST00000522371 ACTR5Q9H9F9 607 aaPredicted RBP3.44□□□□□ -1.86
HDAC2-213ENST00000522371 THSD1Q9NS62 852 aa3.44□□□□□ -1.86
HDAC2-213ENST00000522371 KIAA1456Q9P272 454 aa3.44□□□□□ -1.86
HDAC2-213ENST00000522371 LIMA1Q9UHB6 759 aaKnown RBP3.44□□□□□ -1.86
HDAC2-213ENST00000522371 PCDHGB4Q9UN71 923 aa3.44□□□□□ -1.86
HDAC2-213ENST00000522371 PCDHA7Q9UN72 937 aa3.44□□□□□ -1.86
HDAC2-213ENST00000522371 SLC45A1Q9Y2W3 748 aa3.44□□□□□ -1.86
HDAC2-213ENST00000522371 KIR2DS5A0A0G2JLQ3 304 aa3.43□□□□□ -1.86
HDAC2-213ENST00000522371 A6NNC1 897 aa3.43□□□□□ -1.86
HDAC2-213ENST00000522371 FOXO6A8MYZ6 492 aa3.43□□□□□ -1.86
HDAC2-213ENST00000522371 BTBD18B2RXH4 712 aa3.43□□□□□ -1.86
HDAC2-213ENST00000522371 EIF3CLB5ME19 914 aaKnown RBP3.43□□□□□ -1.86
HDAC2-213ENST00000522371 FAM157AC9JC47 383 aa3.43□□□□□ -1.86
HDAC2-213ENST00000522371 KIR2DS3K7RE56 304 aa3.43□□□□□ -1.86
HDAC2-213ENST00000522371 FIBPO43427 364 aa3.43□□□□□ -1.86
HDAC2-213ENST00000522371 ATG13O75143 517 aa3.43□□□□□ -1.86
HDAC2-213ENST00000522371 TMCC1O94876 653 aa3.43□□□□□ -1.86
HDAC2-213ENST00000522371 SGPL1O95470 568 aa3.43□□□□□ -1.86
HDAC2-213ENST00000522371 FGF3P11487 239 aaPredicted RBP3.43□□□□□ -1.86
HDAC2-213ENST00000522371 HOXB2P14652 356 aa3.43□□□□□ -1.86
HDAC2-213ENST00000522371 TNFRSF8P28908 595 aa3.43□□□□□ -1.86
HDAC2-213ENST00000522371 ARRB2P32121 409 aa3.43□□□□□ -1.86
HDAC2-213ENST00000522371 TTKP33981 857 aa3.43□□□□□ -1.86
HDAC2-213ENST00000522371 MLH1P40692 756 aa3.43□□□□□ -1.86
HDAC2-213ENST00000522371 CLDN2P57739 230 aa3.43□□□□□ -1.86
HDAC2-213ENST00000522371 IRX6P78412 446 aaPredicted RBP3.43□□□□□ -1.86
HDAC2-213ENST00000522371 MAMLD1Q13495 774 aa3.43□□□□□ -1.86
HDAC2-213ENST00000522371 EIF4A2Q14240 407 aaKnown RBP3.43□□□□□ -1.86
HDAC2-213ENST00000522371 RPE65Q16518 533 aa3.43□□□□□ -1.86
HDAC2-213ENST00000522371 SMTNL2Q2TAL5 461 aa3.43□□□□□ -1.86
HDAC2-213ENST00000522371 ALG10Q5BKT4 473 aa3.43□□□□□ -1.86
HDAC2-213ENST00000522371 ALG10BQ5I7T1 473 aa3.43□□□□□ -1.86
HDAC2-213ENST00000522371 SERTAD4-AS1Q5TG53 156 aa3.43□□□□□ -1.86
HDAC2-213ENST00000522371 CDC73Q6P1J9 531 aa3.43□□□□□ -1.86
HDAC2-213ENST00000522371 AAGABQ6PD74 315 aa3.43□□□□□ -1.86
HDAC2-213ENST00000522371 TSSK4Q6SA08 328 aa3.43□□□□□ -1.86
HDAC2-213ENST00000522371 CYP20A1Q6UW02 462 aa3.43□□□□□ -1.86
HDAC2-213ENST00000522371 C16orf54Q6UWD8 224 aa3.43□□□□□ -1.86
HDAC2-213ENST00000522371 IGFN1Q86VF2 1251 aa3.43□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms