RNA–Protein interactions for RNA: ENST00000522243.5

SDCBP-209, Transcript of syndecan binding protein, humanhuman

TSL 5

Gene SDCBP, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-209ENST00000522243 LY6G6EA0A0G2JKS1 128 aa20.89■□□□□ 0.93
SDCBP-209ENST00000522243 TSPAN11A1L157 253 aa20.89■□□□□ 0.93
SDCBP-209ENST00000522243 CKMT1AP12532 417 aa20.89■□□□□ 0.93
SDCBP-209ENST00000522243 AMPD1P23109 780 aa20.89■□□□□ 0.93
SDCBP-209ENST00000522243 E2F1Q01094 437 aa20.89■□□□□ 0.93
SDCBP-209ENST00000522243 ELP6Q0PNE2 266 aa20.89■□□□□ 0.93
SDCBP-209ENST00000522243 C1orf61Q13536 156 aa20.89■□□□□ 0.93
SDCBP-209ENST00000522243 PTK2BQ14289 1009 aa20.89■□□□□ 0.93
SDCBP-209ENST00000522243 GRM3Q14832 879 aa20.89■□□□□ 0.93
SDCBP-209ENST00000522243 IRF4Q15306 451 aa20.89■□□□□ 0.93
SDCBP-209ENST00000522243 PSTKQ8IV42 348 aaKnown RBP20.89■□□□□ 0.93
SDCBP-209ENST00000522243 HSPH1Q92598 858 aa20.89■□□□□ 0.93
SDCBP-209ENST00000522243 NXPE2Q96DL1 559 aa20.89■□□□□ 0.93
SDCBP-209ENST00000522243 BTBD6Q96KE9 485 aa20.89■□□□□ 0.93
SDCBP-209ENST00000522243 DUSP23Q9BVJ7 150 aa20.89■□□□□ 0.93
SDCBP-209ENST00000522243 C1QTNF7Q9BXJ2 289 aa20.89■□□□□ 0.93
SDCBP-209ENST00000522243 THAP2Q9H0W7 228 aa20.89■□□□□ 0.93
SDCBP-209ENST00000522243 PNMA8BQ9ULN7 279 aaPredicted RBP20.89■□□□□ 0.93
SDCBP-209ENST00000522243 AK5Q9Y6K8 562 aa20.89■□□□□ 0.93
SDCBP-209ENST00000522243 U3KQA8 63 aa20.89■□□□□ 0.93
SDCBP-209ENST00000522243 A0A1W2PQJ5 194 aa20.88■□□□□ 0.93
SDCBP-209ENST00000522243 GOLGA6L19H0YKK7 550 aa20.88■□□□□ 0.93
SDCBP-209ENST00000522243 H3BRJ5 948 aa20.88■□□□□ 0.93
SDCBP-209ENST00000522243 AQP9O43315 295 aa20.88■□□□□ 0.93
SDCBP-209ENST00000522243 PCK1P35558 622 aa20.88■□□□□ 0.93
SDCBP-209ENST00000522243 EIF4A3P38919 411 aaKnown RBP20.88■□□□□ 0.93
SDCBP-209ENST00000522243 HCAR3P49019 387 aa20.88■□□□□ 0.93
SDCBP-209ENST00000522243 IL10RBQ08334 325 aa20.88■□□□□ 0.93
SDCBP-209ENST00000522243 DPYSQ14117 519 aa20.88■□□□□ 0.93
SDCBP-209ENST00000522243 COL28A1Q2UY09 1125 aa20.88■□□□□ 0.93
SDCBP-209ENST00000522243 DEFB133Q30KQ1 61 aa20.88■□□□□ 0.93
SDCBP-209ENST00000522243 TXNRD3NBQ6F5E7 133 aa20.88■□□□□ 0.93
SDCBP-209ENST00000522243 PAF1Q8N7H5 531 aa20.88■□□□□ 0.93
SDCBP-209ENST00000522243 HCAR2Q8TDS4 363 aa20.88■□□□□ 0.93
SDCBP-209ENST00000522243 RFFLQ8WZ73 363 aa20.88■□□□□ 0.93
SDCBP-209ENST00000522243 ZNF641Q96N77 438 aaPredicted RBP20.88■□□□□ 0.93
SDCBP-209ENST00000522243 TUBGCP5Q96RT8 1024 aa20.88■□□□□ 0.93
SDCBP-209ENST00000522243 APOBEC3BQ9UH17 382 aaKnown RBP20.88■□□□□ 0.93
SDCBP-209ENST00000522243 BZW2Q9Y6E2 419 aaKnown RBP20.88■□□□□ 0.93
SDCBP-209ENST00000522243 RIOK3O14730 519 aaKnown RBP20.87■□□□□ 0.93
SDCBP-209ENST00000522243 MUSKO15146 869 aa20.87■□□□□ 0.93
SDCBP-209ENST00000522243 MT-CO3P00414 261 aa20.87■□□□□ 0.93
SDCBP-209ENST00000522243 SERPING1P05155 500 aa20.87■□□□□ 0.93
SDCBP-209ENST00000522243 RARAP10276 462 aa20.87■□□□□ 0.93
SDCBP-209ENST00000522243 C6P13671 934 aa20.87■□□□□ 0.93
SDCBP-209ENST00000522243 ARL4AP40617 200 aa20.87■□□□□ 0.93
SDCBP-209ENST00000522243 CSNK1DP48730 415 aa20.87■□□□□ 0.93
SDCBP-209ENST00000522243 SCNN1BP51168 640 aa20.87■□□□□ 0.93
SDCBP-209ENST00000522243 SUOXP51687 545 aa20.87■□□□□ 0.93
SDCBP-209ENST00000522243 YPEL5P62699 121 aa20.87■□□□□ 0.93
SDCBP-209ENST00000522243 LRRC14Q15048 493 aa20.87■□□□□ 0.93
SDCBP-209ENST00000522243 NFKBIBQ15653 356 aa20.87■□□□□ 0.93
SDCBP-209ENST00000522243 WSCD2Q2TBF2 565 aa20.87■□□□□ 0.93
SDCBP-209ENST00000522243 FAXCQ5TGI0 409 aa20.87■□□□□ 0.93
SDCBP-209ENST00000522243 ERAP2Q6P179 960 aa20.87■□□□□ 0.93
SDCBP-209ENST00000522243 PHACTR4Q8IZ21 702 aa20.87■□□□□ 0.93
SDCBP-209ENST00000522243 FAM181AQ8N9Y4 354 aa20.87■□□□□ 0.93
SDCBP-209ENST00000522243 NSMCE3Q96MG7 304 aa20.87■□□□□ 0.93
SDCBP-209ENST00000522243 DCBLD2Q96PD2 775 aa20.87■□□□□ 0.93
SDCBP-209ENST00000522243 ATP13A3Q9H7F0 1226 aa20.87■□□□□ 0.93
SDCBP-209ENST00000522243 ETNK2Q9NVF9 386 aa20.87■□□□□ 0.93
SDCBP-209ENST00000522243 IFNKQ9P0W0 207 aa20.87■□□□□ 0.93
SDCBP-209ENST00000522243 CAPN11Q9UMQ6 739 aa20.87■□□□□ 0.93
SDCBP-209ENST00000522243 ATP8A1Q9Y2Q0 1164 aa20.87■□□□□ 0.93
SDCBP-209ENST00000522243 CSNK1G3Q9Y6M4 447 aa20.87■□□□□ 0.93
SDCBP-209ENST00000522243 A0A087X0T9 212 aa20.86■□□□□ 0.93
SDCBP-209ENST00000522243 TTC24A2A3L6 582 aaPredicted RBP20.86■□□□□ 0.93
SDCBP-209ENST00000522243 LZTS3O60299 673 aaPredicted RBP20.86■□□□□ 0.93
SDCBP-209ENST00000522243 GCATO75600 419 aa20.86■□□□□ 0.93
SDCBP-209ENST00000522243 FAM228BP0C875 321 aa20.86■□□□□ 0.93
SDCBP-209ENST00000522243 SERPINA4P29622 427 aa20.86■□□□□ 0.93
SDCBP-209ENST00000522243 LIG3P49916 1009 aa20.86■□□□□ 0.93
SDCBP-209ENST00000522243 ZNF135P52742 658 aaPredicted RBP20.86■□□□□ 0.93
SDCBP-209ENST00000522243 ZBED6P86452 979 aa20.86■□□□□ 0.93
SDCBP-209ENST00000522243 SLC10A7Q0GE19 358 aa20.86■□□□□ 0.93
SDCBP-209ENST00000522243 ACAP1Q15027 740 aa20.86■□□□□ 0.93
SDCBP-209ENST00000522243 DPYSL2Q16555 572 aa20.86■□□□□ 0.93
SDCBP-209ENST00000522243 CDKN3Q16667 212 aa20.86■□□□□ 0.93
SDCBP-209ENST00000522243 BOLA3Q53S33 107 aa20.86■□□□□ 0.93
SDCBP-209ENST00000522243 PRRT3Q5FWE3 981 aa20.86■□□□□ 0.93
SDCBP-209ENST00000522243 ZCCHC8Q6NZY4 707 aaKnown RBP20.86■□□□□ 0.93
SDCBP-209ENST00000522243 BRAT1Q6PJG6 821 aa20.86■□□□□ 0.93
SDCBP-209ENST00000522243 POLNQ7Z5Q5 900 aa20.86■□□□□ 0.93
SDCBP-209ENST00000522243 BTN2A2Q8WVV5 523 aa20.86■□□□□ 0.93
SDCBP-209ENST00000522243 SYN2Q92777 582 aaPredicted RBP20.86■□□□□ 0.93
SDCBP-209ENST00000522243 IL12RB2Q99665 862 aa20.86■□□□□ 0.93
SDCBP-209ENST00000522243 NUP85Q9BW27 656 aa20.86■□□□□ 0.93
SDCBP-209ENST00000522243 STAU2Q9NUL3 570 aaKnown RBP eCLIP20.86■□□□□ 0.93
SDCBP-209ENST00000522243 SPASTQ9UBP0 616 aa20.86■□□□□ 0.93
SDCBP-209ENST00000522243 ANAPC7Q9UJX3 599 aa20.86■□□□□ 0.93
SDCBP-209ENST00000522243 ZFHX4Q86UP3 3567 aa20.85■□□□□ 0.93
SDCBP-209ENST00000522243 KNTC1P50748 2209 aa20.85■□□□□ 0.93
SDCBP-209ENST00000522243 WDFY3Q8IZQ1 3526 aa20.85■□□□□ 0.93
SDCBP-209ENST00000522243 SHROOM3Q8TF72 1996 aa20.85■□□□□ 0.93
SDCBP-209ENST00000522243 CPED1A4D0V7 1026 aa20.85■□□□□ 0.93
SDCBP-209ENST00000522243 OPA1O60313 960 aa20.85■□□□□ 0.93
SDCBP-209ENST00000522243 MMP12P39900 470 aa20.85■□□□□ 0.93
SDCBP-209ENST00000522243 DUSP3P51452 185 aaPredicted RBP20.85■□□□□ 0.93
SDCBP-209ENST00000522243 ADKP55263 362 aaKnown RBP20.85■□□□□ 0.93
SDCBP-209ENST00000522243 BCL2L1Q07817 233 aa20.85■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms