RNA–Protein interactions for RNA: ENST00000521439.1

NUDCD1-204, Transcript of NudC domain containing 1, humanhuman

TSL 1 (best)

Gene NUDCD1, Length 1,172 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD1-204ENST00000521439 EIF4A2Q14240 407 aaKnown RBP6.91□□□□□ -1.3
NUDCD1-204ENST00000521439 CTR9Q6PD62 1173 aa6.91□□□□□ -1.3
NUDCD1-204ENST00000521439 CCDC73Q6ZRK6 1079 aa6.91□□□□□ -1.3
NUDCD1-204ENST00000521439 TBC1D26Q86UD7 250 aa6.91□□□□□ -1.3
NUDCD1-204ENST00000521439 ZSCAN30Q86W11 494 aa6.91□□□□□ -1.3
NUDCD1-204ENST00000521439 CAMK1DQ8IU85 385 aa6.91□□□□□ -1.3
NUDCD1-204ENST00000521439 KIAA2013Q8IYS2 634 aa6.91□□□□□ -1.3
NUDCD1-204ENST00000521439 TTC30BQ8N4P2 665 aa6.91□□□□□ -1.3
NUDCD1-204ENST00000521439 MCPH1Q8NEM0 835 aa6.91□□□□□ -1.3
NUDCD1-204ENST00000521439 MPLKIPQ8TAP9 179 aa6.91□□□□□ -1.3
NUDCD1-204ENST00000521439 RNF183Q96D59 192 aa6.91□□□□□ -1.3
NUDCD1-204ENST00000521439 BARD1Q99728 777 aaKnown RBP6.91□□□□□ -1.3
NUDCD1-204ENST00000521439 GLIS2Q9BZE0 524 aaPredicted RBP6.91□□□□□ -1.3
NUDCD1-204ENST00000521439 SPATS2LQ9NUQ6 558 aaKnown RBP6.91□□□□□ -1.3
NUDCD1-204ENST00000521439 TRNAU1APQ9NX07 287 aaKnown RBP6.91□□□□□ -1.3
NUDCD1-204ENST00000521439 NCKIPSDQ9NZQ3 722 aa6.91□□□□□ -1.3
NUDCD1-204ENST00000521439 HEY2Q9UBP5 337 aa6.91□□□□□ -1.3
NUDCD1-204ENST00000521439 FBXO2Q9UK22 296 aaPredicted RBP6.91□□□□□ -1.3
NUDCD1-204ENST00000521439 STMND1H3BQB6 276 aa6.9□□□□□ -1.3
NUDCD1-204ENST00000521439 TAF4O00268 1085 aa6.9□□□□□ -1.3
NUDCD1-204ENST00000521439 MDM4O15151 490 aa6.9□□□□□ -1.3
NUDCD1-204ENST00000521439 KIF5CO60282 957 aa6.9□□□□□ -1.3
NUDCD1-204ENST00000521439 FGBP02675 491 aa6.9□□□□□ -1.3
NUDCD1-204ENST00000521439 MMP3P08254 477 aa6.9□□□□□ -1.3
NUDCD1-204ENST00000521439 LAMP2P13473 410 aa6.9□□□□□ -1.3
NUDCD1-204ENST00000521439 ENO3P13929 434 aaPredicted RBP6.9□□□□□ -1.3
NUDCD1-204ENST00000521439 EDN2P20800 178 aa6.9□□□□□ -1.3
NUDCD1-204ENST00000521439 ARL3P36405 182 aa6.9□□□□□ -1.3
NUDCD1-204ENST00000521439 RARSP54136 660 aaKnown RBP6.9□□□□□ -1.3
NUDCD1-204ENST00000521439 TMPRSS3P57727 454 aa6.9□□□□□ -1.3
NUDCD1-204ENST00000521439 SRSF1Q07955 248 aaKnown RBP eCLIP6.9□□□□□ -1.3
NUDCD1-204ENST00000521439 MAMLD1Q13495 774 aa6.9□□□□□ -1.3
NUDCD1-204ENST00000521439 RUNX2Q13950 521 aa6.9□□□□□ -1.3
NUDCD1-204ENST00000521439 RNPS1Q15287 305 aaKnown RBP6.9□□□□□ -1.3
NUDCD1-204ENST00000521439 HIST2H2ACQ16777 129 aaPredicted RBP6.9□□□□□ -1.3
NUDCD1-204ENST00000521439 TMEM71Q6P5X7 295 aa6.9□□□□□ -1.3
NUDCD1-204ENST00000521439 CPLX2Q6PUV4 134 aaKnown RBP6.9□□□□□ -1.3
NUDCD1-204ENST00000521439 SHC4Q6S5L8 630 aa6.9□□□□□ -1.3
NUDCD1-204ENST00000521439 CCDC47Q96A33 483 aaKnown RBP6.9□□□□□ -1.3
NUDCD1-204ENST00000521439 NCAPGQ9BPX3 1015 aa6.9□□□□□ -1.3
NUDCD1-204ENST00000521439 MVB12BQ9H7P6 319 aa6.9□□□□□ -1.3
NUDCD1-204ENST00000521439 TUBA8Q9NY65 449 aaPredicted RBP6.9□□□□□ -1.3
NUDCD1-204ENST00000521439 CGNQ9P2M7 1197 aaKnown RBP6.9□□□□□ -1.3
NUDCD1-204ENST00000521439 CTNNAL1Q9UBT7 734 aa6.9□□□□□ -1.3
NUDCD1-204ENST00000521439 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP6.9□□□□□ -1.31
NUDCD1-204ENST00000521439 WDR97A6NE52 1622 aa6.9□□□□□ -1.31
NUDCD1-204ENST00000521439 ANKRD18BA2A2Z9 1011 aa6.89□□□□□ -1.31
NUDCD1-204ENST00000521439 TYW5A2RUC4 315 aaKnown RBP6.89□□□□□ -1.31
NUDCD1-204ENST00000521439 GAGE12JA6NER3 117 aa6.89□□□□□ -1.31
NUDCD1-204ENST00000521439 LRRC53A6NM62 1247 aa6.89□□□□□ -1.31
NUDCD1-204ENST00000521439 ZC3H11AO75152 810 aaKnown RBP eCLIP6.89□□□□□ -1.31
NUDCD1-204ENST00000521439 SEC31AO94979 1220 aaKnown RBP6.89□□□□□ -1.31
NUDCD1-204ENST00000521439 IFNA2P01563 188 aa6.89□□□□□ -1.31
NUDCD1-204ENST00000521439 KLKB1P03952 638 aa6.89□□□□□ -1.31
NUDCD1-204ENST00000521439 ACADMP11310 421 aa6.89□□□□□ -1.31
NUDCD1-204ENST00000521439 PCNAP12004 261 aa6.89□□□□□ -1.31
NUDCD1-204ENST00000521439 GABRB2P47870 512 aa6.89□□□□□ -1.31
NUDCD1-204ENST00000521439 GNAQP50148 359 aa6.89□□□□□ -1.31
NUDCD1-204ENST00000521439 TERF1P54274 439 aa6.89□□□□□ -1.31
NUDCD1-204ENST00000521439 CLDN2P57739 230 aa6.89□□□□□ -1.31
NUDCD1-204ENST00000521439 ARF3P61204 181 aaPredicted RBP6.89□□□□□ -1.31
NUDCD1-204ENST00000521439 ARF1P84077 181 aaKnown RBP6.89□□□□□ -1.31
NUDCD1-204ENST00000521439 TMEM115Q12893 351 aaPredicted RBP6.89□□□□□ -1.31
NUDCD1-204ENST00000521439 RBMS2Q15434 407 aaKnown RBP6.89□□□□□ -1.31
NUDCD1-204ENST00000521439 CCNG2Q16589 344 aa6.89□□□□□ -1.31
NUDCD1-204ENST00000521439 CCDC184Q52MB2 194 aa6.89□□□□□ -1.31
NUDCD1-204ENST00000521439 PLEKHO1Q53GL0 409 aaPredicted RBP6.89□□□□□ -1.31
NUDCD1-204ENST00000521439 CCDC92Q53HC0 331 aaPredicted RBP6.89□□□□□ -1.31
NUDCD1-204ENST00000521439 ITPRIPL1Q6GPH6 555 aa6.89□□□□□ -1.31
NUDCD1-204ENST00000521439 HEPHL1Q6MZM0 1159 aa6.89□□□□□ -1.31
NUDCD1-204ENST00000521439 PIP4P1Q86T03 277 aa6.89□□□□□ -1.31
NUDCD1-204ENST00000521439 LURAP1LQ8IV03 231 aa6.89□□□□□ -1.31
NUDCD1-204ENST00000521439 CEP76Q8TAP6 659 aa6.89□□□□□ -1.31
NUDCD1-204ENST00000521439 BICD2Q8TD16 824 aa6.89□□□□□ -1.31
NUDCD1-204ENST00000521439 PERPQ96FX8 193 aa6.89□□□□□ -1.31
NUDCD1-204ENST00000521439 TIGD1Q96MW7 591 aa6.89□□□□□ -1.31
NUDCD1-204ENST00000521439 YME1L1Q96TA2 773 aa6.89□□□□□ -1.31
NUDCD1-204ENST00000521439 WDR77Q9BQA1 342 aaPredicted RBP6.89□□□□□ -1.31
NUDCD1-204ENST00000521439 ITPAQ9BY32 194 aa6.89□□□□□ -1.31
NUDCD1-204ENST00000521439 NUF2Q9BZD4 464 aa6.89□□□□□ -1.31
NUDCD1-204ENST00000521439 KLHL31Q9H511 634 aa6.89□□□□□ -1.31
NUDCD1-204ENST00000521439 DECR2Q9NUI1 292 aa6.89□□□□□ -1.31
NUDCD1-204ENST00000521439 DONSONQ9NYP3 566 aa6.89□□□□□ -1.31
NUDCD1-204ENST00000521439 CARD8Q9Y2G2 431 aa6.89□□□□□ -1.31
NUDCD1-204ENST00000521439 CECR2Q9BXF3 1484 aa6.89□□□□□ -1.31
NUDCD1-204ENST00000521439 NCOA2Q15596 1464 aa6.88□□□□□ -1.31
NUDCD1-204ENST00000521439 CCNB3Q8WWL7 1395 aa6.88□□□□□ -1.31
NUDCD1-204ENST00000521439 ZBED9Q6R2W3 1325 aa6.88□□□□□ -1.31
NUDCD1-204ENST00000521439 FSD2A1L4K1 749 aa6.88□□□□□ -1.31
NUDCD1-204ENST00000521439 PRSS47A8MTI9 375 aa6.88□□□□□ -1.31
NUDCD1-204ENST00000521439 TIPRLO75663 272 aa6.88□□□□□ -1.31
NUDCD1-204ENST00000521439 CLDN7O95471 211 aa6.88□□□□□ -1.31
NUDCD1-204ENST00000521439 AVPR1AP37288 418 aa6.88□□□□□ -1.31
NUDCD1-204ENST00000521439 ALDH7A1P49419 539 aaKnown RBP6.88□□□□□ -1.31
NUDCD1-204ENST00000521439 CLNS1AP54105 237 aaKnown RBP6.88□□□□□ -1.31
NUDCD1-204ENST00000521439 OLR1P78380 273 aa6.88□□□□□ -1.31
NUDCD1-204ENST00000521439 PPP2R5BQ15173 497 aa6.88□□□□□ -1.31
NUDCD1-204ENST00000521439 RBFAQ8N0V3 343 aa6.88□□□□□ -1.31
NUDCD1-204ENST00000521439 ARFGAP1Q8N6T3 406 aa6.88□□□□□ -1.31
NUDCD1-204ENST00000521439 NANOGP1Q8N7R0 232 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms