RNA–Protein interactions for RNA: ENST00000520410.2

IGHV3-42-201, Transcript of immunoglobulin heavy variable 3-42 (pseudogene), humanhuman

BASIC

Gene IGHV3-42, Length 361 nt, Biotype IG V pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-42-201ENST00000520410 PFN3P60673 137 aa16.29■□□□□ 0.2
IGHV3-42-201ENST00000520410 FANCCQ00597 558 aa16.29■□□□□ 0.2
IGHV3-42-201ENST00000520410 PPARDQ03181 441 aa16.29■□□□□ 0.2
IGHV3-42-201ENST00000520410 BCL2L1Q07817 233 aa16.29■□□□□ 0.2
IGHV3-42-201ENST00000520410 ARHGAP36Q6ZRI8 547 aa16.29■□□□□ 0.2
IGHV3-42-201ENST00000520410 EFL1Q7Z2Z2 1120 aaKnown RBP16.29■□□□□ 0.2
IGHV3-42-201ENST00000520410 SRLQ86TD4 932 aa16.29■□□□□ 0.2
IGHV3-42-201ENST00000520410 PDZD3Q86UT5 571 aa16.29■□□□□ 0.2
IGHV3-42-201ENST00000520410 CAMK1DQ8IU85 385 aa16.29■□□□□ 0.2
IGHV3-42-201ENST00000520410 HID1Q8IV36 788 aa16.29■□□□□ 0.2
IGHV3-42-201ENST00000520410 TSEN2Q8NCE0 465 aaKnown RBP16.29■□□□□ 0.2
IGHV3-42-201ENST00000520410 PDCD6IPQ8WUM4 868 aaKnown RBP16.29■□□□□ 0.2
IGHV3-42-201ENST00000520410 ASB12Q8WXK4 309 aa16.29■□□□□ 0.2
IGHV3-42-201ENST00000520410 DEPDC7Q96QD5 511 aa16.29■□□□□ 0.2
IGHV3-42-201ENST00000520410 CPEB1Q9BZB8 566 aaKnown RBP16.29■□□□□ 0.2
IGHV3-42-201ENST00000520410 TCEAL2Q9H3H9 227 aaPredicted RBP16.29■□□□□ 0.2
IGHV3-42-201ENST00000520410 PDFQ9HBH1 243 aa16.29■□□□□ 0.2
IGHV3-42-201ENST00000520410 CBX8Q9HC52 389 aa16.29■□□□□ 0.2
IGHV3-42-201ENST00000520410 STAU2Q9NUL3 570 aaKnown RBP eCLIP16.29■□□□□ 0.2
IGHV3-42-201ENST00000520410 DKK3Q9UBP4 350 aa16.29■□□□□ 0.2
IGHV3-42-201ENST00000520410 MFHAS1Q9Y4C4 1052 aa16.29■□□□□ 0.2
IGHV3-42-201ENST00000520410 IGF2RP11717 2491 aa16.29■□□□□ 0.2
IGHV3-42-201ENST00000520410 A8MX80 341 aa16.28■□□□□ 0.2
IGHV3-42-201ENST00000520410 MUSKO15146 869 aa16.28■□□□□ 0.2
IGHV3-42-201ENST00000520410 RRP8O43159 456 aaKnown RBP16.28■□□□□ 0.2
IGHV3-42-201ENST00000520410 OPA1O60313 960 aa16.28■□□□□ 0.2
IGHV3-42-201ENST00000520410 LRCH4O75427 683 aa16.28■□□□□ 0.2
IGHV3-42-201ENST00000520410 HTR1BP28222 390 aa16.28■□□□□ 0.2
IGHV3-42-201ENST00000520410 PRKCIP41743 596 aa16.28■□□□□ 0.2
IGHV3-42-201ENST00000520410 LIG3P49916 1009 aa16.28■□□□□ 0.2
IGHV3-42-201ENST00000520410 EIF2B5Q13144 721 aaKnown RBP16.28■□□□□ 0.2
IGHV3-42-201ENST00000520410 KRT81Q14533 505 aa16.28■□□□□ 0.2
IGHV3-42-201ENST00000520410 NR0B2Q15466 257 aa16.28■□□□□ 0.2
IGHV3-42-201ENST00000520410 UGP2Q16851 508 aa16.28■□□□□ 0.2
IGHV3-42-201ENST00000520410 BRAT1Q6PJG6 821 aa16.28■□□□□ 0.2
IGHV3-42-201ENST00000520410 TMCO3Q6UWJ1 677 aa16.28■□□□□ 0.2
IGHV3-42-201ENST00000520410 ENPP7Q6UWV6 458 aa16.28■□□□□ 0.2
IGHV3-42-201ENST00000520410 MACC1Q6ZN28 852 aa16.28■□□□□ 0.2
IGHV3-42-201ENST00000520410 ARFGAP1Q8N6T3 406 aa16.28■□□□□ 0.2
IGHV3-42-201ENST00000520410 TP53I13Q8NBR0 393 aaPredicted RBP16.28■□□□□ 0.2
IGHV3-42-201ENST00000520410 NSMCE1Q8WV22 266 aa16.28■□□□□ 0.2
IGHV3-42-201ENST00000520410 TUBGCP5Q96RT8 1024 aa16.28■□□□□ 0.2
IGHV3-42-201ENST00000520410 NRSN2Q9GZP1 204 aa16.28■□□□□ 0.2
IGHV3-42-201ENST00000520410 WDR70Q9NW82 654 aa16.28■□□□□ 0.2
IGHV3-42-201ENST00000520410 SIRPGQ9P1W8 387 aa16.28■□□□□ 0.2
IGHV3-42-201ENST00000520410 DKK4Q9UBT3 224 aa16.28■□□□□ 0.2
IGHV3-42-201ENST00000520410 KLF15Q9UIH9 416 aa16.28■□□□□ 0.2
IGHV3-42-201ENST00000520410 MOSPD1Q9UJG1 213 aa16.28■□□□□ 0.2
IGHV3-42-201ENST00000520410 ATP8A1Q9Y2Q0 1164 aa16.28■□□□□ 0.2
IGHV3-42-201ENST00000520410 EIF4E1BA6NMX2 242 aaKnown RBP16.27■□□□□ 0.2
IGHV3-42-201ENST00000520410 BRINP1O60477 761 aa16.27■□□□□ 0.2
IGHV3-42-201ENST00000520410 CSO75390 466 aaKnown RBP16.27■□□□□ 0.2
IGHV3-42-201ENST00000520410 ELFN1P0C7U0 828 aa16.27■□□□□ 0.2
IGHV3-42-201ENST00000520410 RGRP47804 291 aa16.27■□□□□ 0.2
IGHV3-42-201ENST00000520410 RPIAP49247 311 aa16.27■□□□□ 0.2
IGHV3-42-201ENST00000520410 SUOXP51687 545 aa16.27■□□□□ 0.2
IGHV3-42-201ENST00000520410 YPEL5P62699 121 aa16.27■□□□□ 0.2
IGHV3-42-201ENST00000520410 IL10RBQ08334 325 aa16.27■□□□□ 0.2
IGHV3-42-201ENST00000520410 NR1I3Q14994 352 aa16.27■□□□□ 0.2
IGHV3-42-201ENST00000520410 IQCB1Q15051 598 aa16.27■□□□□ 0.2
IGHV3-42-201ENST00000520410 TMEM52BQ4KMG9 183 aa16.27■□□□□ 0.2
IGHV3-42-201ENST00000520410 ZFYVE27Q5T4F4 411 aa16.27■□□□□ 0.2
IGHV3-42-201ENST00000520410 DENND2CQ68D51 928 aa16.27■□□□□ 0.2
IGHV3-42-201ENST00000520410 GUSBP11Q6P575 273 aa16.27■□□□□ 0.2
IGHV3-42-201ENST00000520410 FOXR1Q6PIV2 292 aa16.27■□□□□ 0.2
IGHV3-42-201ENST00000520410 BBS5Q8N3I7 341 aa16.27■□□□□ 0.2
IGHV3-42-201ENST00000520410 NPWQ8N729 165 aa16.27■□□□□ 0.2
IGHV3-42-201ENST00000520410 FNIP1Q8TF40 1166 aa16.27■□□□□ 0.2
IGHV3-42-201ENST00000520410 CENPTQ96BT3 561 aa16.27■□□□□ 0.2
IGHV3-42-201ENST00000520410 BTBD6Q96KE9 485 aa16.27■□□□□ 0.2
IGHV3-42-201ENST00000520410 ZNF641Q96N77 438 aaPredicted RBP16.27■□□□□ 0.2
IGHV3-42-201ENST00000520410 EDEM3Q9BZQ6 932 aa16.27■□□□□ 0.2
IGHV3-42-201ENST00000520410 USP29Q9HBJ7 922 aa16.27■□□□□ 0.2
IGHV3-42-201ENST00000520410 GPR27Q9NS67 375 aa16.27■□□□□ 0.2
IGHV3-42-201ENST00000520410 NCKIPSDQ9NZQ3 722 aa16.27■□□□□ 0.2
IGHV3-42-201ENST00000520410 CWC15Q9P013 229 aaKnown RBP16.27■□□□□ 0.2
IGHV3-42-201ENST00000520410 GULP1Q9UBP9 304 aa16.27■□□□□ 0.2
IGHV3-42-201ENST00000520410 KLQ9UEF7 1012 aa16.27■□□□□ 0.2
IGHV3-42-201ENST00000520410 SEPT3Q9UH03 358 aa16.27■□□□□ 0.2
IGHV3-42-201ENST00000520410 ANAPC7Q9UJX3 599 aa16.27■□□□□ 0.2
IGHV3-42-201ENST00000520410 OR1A2Q9Y585 309 aa16.27■□□□□ 0.2
IGHV3-42-201ENST00000520410 PCDHB1Q9Y5F3 818 aa16.27■□□□□ 0.2
IGHV3-42-201ENST00000520410 TRPM6Q9BX84 2022 aa16.27■□□□□ 0.2
IGHV3-42-201ENST00000520410 CABIN1Q9Y6J0 2220 aa16.26■□□□□ 0.19
IGHV3-42-201ENST00000520410 GOLGA6CA6NDK9 693 aa16.26■□□□□ 0.19
IGHV3-42-201ENST00000520410 GOLGA6BA6NDN3 693 aa16.26■□□□□ 0.19
IGHV3-42-201ENST00000520410 BUB1BO60566 1050 aaPredicted RBP16.26■□□□□ 0.19
IGHV3-42-201ENST00000520410 USP12O75317 370 aa16.26■□□□□ 0.19
IGHV3-42-201ENST00000520410 GOLGA6DP0CG33 693 aa16.26■□□□□ 0.19
IGHV3-42-201ENST00000520410 GIMD1P0DJR0 217 aa16.26■□□□□ 0.19
IGHV3-42-201ENST00000520410 AMPD1P23109 780 aa16.26■□□□□ 0.19
IGHV3-42-201ENST00000520410 ACTN2P35609 894 aa16.26■□□□□ 0.19
IGHV3-42-201ENST00000520410 BLKP51451 505 aa16.26■□□□□ 0.19
IGHV3-42-201ENST00000520410 RENBPP51606 427 aa16.26■□□□□ 0.19
IGHV3-42-201ENST00000520410 ZNF135P52742 658 aaPredicted RBP16.26■□□□□ 0.19
IGHV3-42-201ENST00000520410 LBRQ14739 615 aaKnown RBP16.26■□□□□ 0.19
IGHV3-42-201ENST00000520410 ACOX1Q15067 660 aa16.26■□□□□ 0.19
IGHV3-42-201ENST00000520410 TMCO4Q5TGY1 634 aa16.26■□□□□ 0.19
IGHV3-42-201ENST00000520410 ESRP1Q6NXG1 681 aaKnown RBP16.26■□□□□ 0.19
IGHV3-42-201ENST00000520410 ARHGAP12Q8IWW6 846 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms