RNA–Protein interactions for RNA: ENST00000520339.5

CTNNA1-221, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 868 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-221ENST00000520339 URB1O60287 2271 aaKnown RBP9.45□□□□□ -0.9
CTNNA1-221ENST00000520339 AKAP13Q12802 2813 aa9.45□□□□□ -0.9
CTNNA1-221ENST00000520339 ATRXP46100 2492 aa9.44□□□□□ -0.9
CTNNA1-221ENST00000520339 C2CD4BA6NLJ0 364 aa9.44□□□□□ -0.9
CTNNA1-221ENST00000520339 TRIM38O00635 465 aa9.44□□□□□ -0.9
CTNNA1-221ENST00000520339 EPHB6O15197 1021 aa9.44□□□□□ -0.9
CTNNA1-221ENST00000520339 LEFTY1O75610 366 aa9.44□□□□□ -0.9
CTNNA1-221ENST00000520339 RFPL3O75679 317 aa9.44□□□□□ -0.9
CTNNA1-221ENST00000520339 JUPP14923 745 aa9.44□□□□□ -0.9
CTNNA1-221ENST00000520339 CKMT2P17540 419 aa9.44□□□□□ -0.9
CTNNA1-221ENST00000520339 AKT2P31751 481 aa9.44□□□□□ -0.9
CTNNA1-221ENST00000520339 ADRA1BP35368 520 aa9.44□□□□□ -0.9
CTNNA1-221ENST00000520339 SOX5P35711 763 aa9.44□□□□□ -0.9
CTNNA1-221ENST00000520339 ACVRL1P37023 503 aa9.44□□□□□ -0.9
CTNNA1-221ENST00000520339 RECQLP46063 649 aaPredicted RBP9.44□□□□□ -0.9
CTNNA1-221ENST00000520339 SERPINH1P50454 418 aaKnown RBP9.44□□□□□ -0.9
CTNNA1-221ENST00000520339 CLDN6P56747 220 aa9.44□□□□□ -0.9
CTNNA1-221ENST00000520339 JAM2P57087 298 aa9.44□□□□□ -0.9
CTNNA1-221ENST00000520339 POLR2FP61218 127 aaKnown RBP9.44□□□□□ -0.9
CTNNA1-221ENST00000520339 ARF5P84085 180 aa9.44□□□□□ -0.9
CTNNA1-221ENST00000520339 GNA12Q03113 381 aa9.44□□□□□ -0.9
CTNNA1-221ENST00000520339 PTP4A2Q12974 167 aa9.44□□□□□ -0.9
CTNNA1-221ENST00000520339 ILKQ13418 452 aa9.44□□□□□ -0.9
CTNNA1-221ENST00000520339 KRT31Q15323 416 aa9.44□□□□□ -0.9
CTNNA1-221ENST00000520339 C15orf59Q2T9L4 293 aaPredicted RBP9.44□□□□□ -0.9
CTNNA1-221ENST00000520339 COL28A1Q2UY09 1125 aa9.44□□□□□ -0.9
CTNNA1-221ENST00000520339 CARD16Q5EG05 197 aa9.44□□□□□ -0.9
CTNNA1-221ENST00000520339 MANEALQ5VSG8 457 aa9.44□□□□□ -0.9
CTNNA1-221ENST00000520339 SEL1L3Q68CR1 1132 aa9.44□□□□□ -0.9
CTNNA1-221ENST00000520339 FBXL19Q6PCT2 694 aa9.44□□□□□ -0.9
CTNNA1-221ENST00000520339 ADAMTSL4Q6UY14 1074 aa9.44□□□□□ -0.9
CTNNA1-221ENST00000520339 PHLDB2Q86SQ0 1253 aa9.44□□□□□ -0.9
CTNNA1-221ENST00000520339 NLRP14Q86W24 1093 aa9.44□□□□□ -0.9
CTNNA1-221ENST00000520339 PCDH20Q8N6Y1 951 aaKnown RBP9.44□□□□□ -0.9
CTNNA1-221ENST00000520339 NUDT8Q8WV74 236 aa9.44□□□□□ -0.9
CTNNA1-221ENST00000520339 CENPIQ92674 756 aaPredicted RBP9.44□□□□□ -0.9
CTNNA1-221ENST00000520339 PCDHB18PQ96TA0 734 aa9.44□□□□□ -0.9
CTNNA1-221ENST00000520339 MAGEB5Q9BZ81 275 aa9.44□□□□□ -0.9
CTNNA1-221ENST00000520339 OSBPL2Q9H1P3 480 aa9.44□□□□□ -0.9
CTNNA1-221ENST00000520339 VPS16Q9H269 839 aa9.44□□□□□ -0.9
CTNNA1-221ENST00000520339 RETREG1Q9H6L5 497 aa9.44□□□□□ -0.9
CTNNA1-221ENST00000520339 DYRK4Q9NR20 520 aa9.44□□□□□ -0.9
CTNNA1-221ENST00000520339 IL36AQ9UHA7 158 aa9.44□□□□□ -0.9
CTNNA1-221ENST00000520339 SIK3Q9Y2K2 1263 aa9.44□□□□□ -0.9
CTNNA1-221ENST00000520339 ACTL7AQ9Y615 435 aa9.44□□□□□ -0.9
CTNNA1-221ENST00000520339 GOLGA4Q13439 2230 aaKnown RBP9.44□□□□□ -0.9
CTNNA1-221ENST00000520339 CEP192Q8TEP8 1941 aa9.43□□□□□ -0.9
CTNNA1-221ENST00000520339 CXorf51AA0A1B0GTR3 108 aa9.43□□□□□ -0.9
CTNNA1-221ENST00000520339 FAM72CH0Y354 149 aa9.43□□□□□ -0.9
CTNNA1-221ENST00000520339 SIGLEC6O43699 453 aa9.43□□□□□ -0.9
CTNNA1-221ENST00000520339 SDC3O75056 442 aa9.43□□□□□ -0.9
CTNNA1-221ENST00000520339 RGS9O75916 674 aaPredicted RBP9.43□□□□□ -0.9
CTNNA1-221ENST00000520339 PCDH8O95206 1070 aa9.43□□□□□ -0.9
CTNNA1-221ENST00000520339 GJB6O95452 261 aa9.43□□□□□ -0.9
CTNNA1-221ENST00000520339 THEGLP0DJG4 465 aa9.43□□□□□ -0.9
CTNNA1-221ENST00000520339 GIMD1P0DJR0 217 aa9.43□□□□□ -0.9
CTNNA1-221ENST00000520339 UNGP13051 313 aaPredicted RBP9.43□□□□□ -0.9
CTNNA1-221ENST00000520339 HNRNPA2B1P22626 353 aaKnown RBP9.43□□□□□ -0.9
CTNNA1-221ENST00000520339 DGKAP23743 735 aa9.43□□□□□ -0.9
CTNNA1-221ENST00000520339 SDC4P31431 198 aa9.43□□□□□ -0.9
CTNNA1-221ENST00000520339 EIF4A3P38919 411 aaKnown RBP9.43□□□□□ -0.9
CTNNA1-221ENST00000520339 STAT1P42224 750 aa9.43□□□□□ -0.9
CTNNA1-221ENST00000520339 LIG3P49916 1009 aa9.43□□□□□ -0.9
CTNNA1-221ENST00000520339 HDAC4P56524 1084 aa9.43□□□□□ -0.9
CTNNA1-221ENST00000520339 CLDN2P57739 230 aa9.43□□□□□ -0.9
CTNNA1-221ENST00000520339 PCDH1Q08174 1060 aa9.43□□□□□ -0.9
CTNNA1-221ENST00000520339 TARDBPQ13148 414 aaKnown RBP eCLIP9.43□□□□□ -0.93e-6■■□□□ 11.6
CTNNA1-221ENST00000520339 FGL2Q14314 439 aa9.43□□□□□ -0.9
CTNNA1-221ENST00000520339 ARL13BQ3SXY8 428 aa9.43□□□□□ -0.9
CTNNA1-221ENST00000520339 FAM72AQ5TYM5 149 aa9.43□□□□□ -0.9
CTNNA1-221ENST00000520339 FAM72DQ6L9T8 149 aa9.43□□□□□ -0.9
CTNNA1-221ENST00000520339 TRIM72Q6ZMU5 477 aa9.43□□□□□ -0.9
CTNNA1-221ENST00000520339 GCNT7Q6ZNI0 430 aa9.43□□□□□ -0.9
CTNNA1-221ENST00000520339 RBM43Q6ZSC3 357 aaKnown RBP9.43□□□□□ -0.9
CTNNA1-221ENST00000520339 ABI3BPQ7Z7G0 1075 aa9.43□□□□□ -0.9
CTNNA1-221ENST00000520339 PDZD3Q86UT5 571 aa9.43□□□□□ -0.9
CTNNA1-221ENST00000520339 FAM72BQ86X60 149 aa9.43□□□□□ -0.9
CTNNA1-221ENST00000520339 DRC7Q8IY82 874 aa9.43□□□□□ -0.9
CTNNA1-221ENST00000520339 CACTIN-AS1Q8N1I8 211 aa9.43□□□□□ -0.9
CTNNA1-221ENST00000520339 JOSD2Q8TAC2 188 aa9.43□□□□□ -0.9
CTNNA1-221ENST00000520339 SLC30A5Q8TAD4 765 aa9.43□□□□□ -0.9
CTNNA1-221ENST00000520339 GRIN3AQ8TCU5 1115 aa9.43□□□□□ -0.9
CTNNA1-221ENST00000520339 HNRNPLLQ8WVV9 542 aaKnown RBP9.43□□□□□ -0.9
CTNNA1-221ENST00000520339 RFFLQ8WZ73 363 aa9.43□□□□□ -0.9
CTNNA1-221ENST00000520339 ARHGEF2Q92974 986 aaKnown RBP9.43□□□□□ -0.9
CTNNA1-221ENST00000520339 VOPP1Q96AW1 172 aa9.43□□□□□ -0.9
CTNNA1-221ENST00000520339 ISG20Q96AZ6 181 aaKnown RBP9.43□□□□□ -0.9
CTNNA1-221ENST00000520339 BMFQ96LC9 184 aa9.43□□□□□ -0.9
CTNNA1-221ENST00000520339 MDFIQ99750 246 aa9.43□□□□□ -0.9
CTNNA1-221ENST00000520339 MYOCQ99972 504 aa9.43□□□□□ -0.9
CTNNA1-221ENST00000520339 HEPHQ9BQS7 1158 aa9.43□□□□□ -0.9
CTNNA1-221ENST00000520339 C11orf70Q9BRQ4 267 aa9.43□□□□□ -0.9
CTNNA1-221ENST00000520339 ADAM19Q9H013 955 aa9.43□□□□□ -0.9
CTNNA1-221ENST00000520339 CAAP1Q9H8G2 361 aa9.43□□□□□ -0.9
CTNNA1-221ENST00000520339 ATP13A1Q9HD20 1204 aa9.43□□□□□ -0.9
CTNNA1-221ENST00000520339 FZD3Q9NPG1 666 aa9.43□□□□□ -0.9
CTNNA1-221ENST00000520339 NLRC4Q9NPP4 1024 aa9.43□□□□□ -0.9
CTNNA1-221ENST00000520339 FAM207AQ9NSI2 230 aaPredicted RBP9.43□□□□□ -0.9
CTNNA1-221ENST00000520339 FANCLQ9NW38 375 aa9.43□□□□□ -0.9
CTNNA1-221ENST00000520339 TMEM248Q9NWD8 314 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms