RNA–Protein interactions for RNA: ENST00000520265.1

VEGFA-221, Transcript of vascular endothelial growth factor A, humanhuman

TSL 5

Gene VEGFA, Length 336 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-221ENST00000520265 BRAT1Q6PJG6 821 aa14.3□□□□□ -0.12
VEGFA-221ENST00000520265 GCNT7Q6ZNI0 430 aa14.3□□□□□ -0.12
VEGFA-221ENST00000520265 IQCHQ86VS3 1027 aa14.3□□□□□ -0.12
VEGFA-221ENST00000520265 SPATS2Q86XZ4 545 aaKnown RBP14.3□□□□□ -0.12
VEGFA-221ENST00000520265 RHOT1Q8IXI2 618 aa14.3□□□□□ -0.12
VEGFA-221ENST00000520265 CCDC170Q8IYT3 715 aa14.3□□□□□ -0.12
VEGFA-221ENST00000520265 PNPLA1Q8N8W4 532 aa14.3□□□□□ -0.12
VEGFA-221ENST00000520265 TMEM145Q8NBT3 493 aa14.3□□□□□ -0.12
VEGFA-221ENST00000520265 PCDH19Q8TAB3 1148 aa14.3□□□□□ -0.12
VEGFA-221ENST00000520265 RAPGEF5Q92565 580 aa14.3□□□□□ -0.12
VEGFA-221ENST00000520265 RNF25Q96BH1 459 aaPredicted RBP14.3□□□□□ -0.12
VEGFA-221ENST00000520265 ZNF641Q96N77 438 aaPredicted RBP14.3□□□□□ -0.12
VEGFA-221ENST00000520265 CDC6Q99741 560 aa14.3□□□□□ -0.12
VEGFA-221ENST00000520265 DNAJC28Q9NX36 388 aa14.3□□□□□ -0.12
VEGFA-221ENST00000520265 DKK3Q9UBP4 350 aa14.3□□□□□ -0.12
VEGFA-221ENST00000520265 ATP8A1Q9Y2Q0 1164 aa14.3□□□□□ -0.12
VEGFA-221ENST00000520265 PCDHGB2Q9Y5G2 931 aa14.3□□□□□ -0.12
VEGFA-221ENST00000520265 TRPM6Q9BX84 2022 aa14.3□□□□□ -0.12
VEGFA-221ENST00000520265 APOL1O14791 398 aa14.29□□□□□ -0.12
VEGFA-221ENST00000520265 MAFKO60675 156 aa14.29□□□□□ -0.12
VEGFA-221ENST00000520265 CPP00450 1065 aa14.29□□□□□ -0.12
VEGFA-221ENST00000520265 FTH1P19P0C7X4 201 aa14.29□□□□□ -0.12
VEGFA-221ENST00000520265 KDELR1P24390 212 aa14.29□□□□□ -0.12
VEGFA-221ENST00000520265 EPHA8P29322 1005 aaPredicted RBP14.29□□□□□ -0.12
VEGFA-221ENST00000520265 HSPA9P38646 679 aaKnown RBP14.29□□□□□ -0.12
VEGFA-221ENST00000520265 GARSP41250 739 aaKnown RBP14.29□□□□□ -0.12
VEGFA-221ENST00000520265 SLC1A1P43005 524 aa14.29□□□□□ -0.12
VEGFA-221ENST00000520265 ARSEP51690 589 aa14.29□□□□□ -0.12
VEGFA-221ENST00000520265 THOP1P52888 689 aa14.29□□□□□ -0.12
VEGFA-221ENST00000520265 GBE1Q04446 702 aa14.29□□□□□ -0.12
VEGFA-221ENST00000520265 LLGL1Q15334 1064 aa14.29□□□□□ -0.12
VEGFA-221ENST00000520265 UGP2Q16851 508 aa14.29□□□□□ -0.12
VEGFA-221ENST00000520265 ZNF542PQ5EBM4 170 aa14.29□□□□□ -0.12
VEGFA-221ENST00000520265 DENND2CQ68D51 928 aa14.29□□□□□ -0.12
VEGFA-221ENST00000520265 KYAT3Q6YP21 454 aaKnown RBP14.29□□□□□ -0.12
VEGFA-221ENST00000520265 KDM7AQ6ZMT4 941 aa14.29□□□□□ -0.12
VEGFA-221ENST00000520265 KIAA1328Q86T90 577 aa14.29□□□□□ -0.12
VEGFA-221ENST00000520265 ZSCAN30Q86W11 494 aa14.29□□□□□ -0.12
VEGFA-221ENST00000520265 CCDC50Q8IVM0 306 aa14.29□□□□□ -0.12
VEGFA-221ENST00000520265 EID2Q8N6I1 236 aa14.29□□□□□ -0.12
VEGFA-221ENST00000520265 PSKH2Q96QS6 385 aa14.29□□□□□ -0.12
VEGFA-221ENST00000520265 PANX2Q96RD6 677 aa14.29□□□□□ -0.12
VEGFA-221ENST00000520265 GOLPH3Q9H4A6 298 aa14.29□□□□□ -0.12
VEGFA-221ENST00000520265 APOBEC2Q9Y235 224 aaKnown RBP14.29□□□□□ -0.12
VEGFA-221ENST00000520265 PCDHGC4Q9Y5F7 938 aa14.29□□□□□ -0.12
VEGFA-221ENST00000520265 CACNA1AO00555 2505 aa14.29□□□□□ -0.12
VEGFA-221ENST00000520265 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP14.28□□□□□ -0.12
VEGFA-221ENST00000520265 POM121BA6NF01 834 aa14.28□□□□□ -0.12
VEGFA-221ENST00000520265 ANKRD36A6QL64 1941 aa14.28□□□□□ -0.12
VEGFA-221ENST00000520265 AREL1O15033 823 aa14.28□□□□□ -0.12
VEGFA-221ENST00000520265 FFAR2O15552 330 aa14.28□□□□□ -0.12
VEGFA-221ENST00000520265 SPINT1O43278 529 aa14.28□□□□□ -0.12
VEGFA-221ENST00000520265 HYAL3O43820 417 aaPredicted RBP14.28□□□□□ -0.12
VEGFA-221ENST00000520265 PCDHGA12O60330 932 aa14.28□□□□□ -0.12
VEGFA-221ENST00000520265 MTA2O94776 668 aa14.28□□□□□ -0.12
VEGFA-221ENST00000520265 PCCBP05166 539 aa14.28□□□□□ -0.12
VEGFA-221ENST00000520265 ELFN1P0C7U0 828 aa14.28□□□□□ -0.12
VEGFA-221ENST00000520265 C6P13671 934 aa14.28□□□□□ -0.12
VEGFA-221ENST00000520265 MX2P20592 715 aa14.28□□□□□ -0.12
VEGFA-221ENST00000520265 IL4RP24394 825 aa14.28□□□□□ -0.12
VEGFA-221ENST00000520265 RABIFP47224 123 aa14.28□□□□□ -0.12
VEGFA-221ENST00000520265 CSNK1DP48730 415 aa14.28□□□□□ -0.12
VEGFA-221ENST00000520265 LIG3P49916 1009 aa14.28□□□□□ -0.12
VEGFA-221ENST00000520265 POLR2LP62875 67 aaKnown RBP14.28□□□□□ -0.12
VEGFA-221ENST00000520265 GALNT2Q10471 571 aa14.28□□□□□ -0.12
VEGFA-221ENST00000520265 BNIP3Q12983 259 aa14.28□□□□□ -0.12
VEGFA-221ENST00000520265 PDE1CQ14123 709 aaPredicted RBP14.28□□□□□ -0.12
VEGFA-221ENST00000520265 PAFAH1B3Q15102 231 aaKnown RBP14.28□□□□□ -0.12
VEGFA-221ENST00000520265 IFI16Q16666 785 aaKnown RBP14.28□□□□□ -0.12
VEGFA-221ENST00000520265 KAZNQ674X7 775 aa14.28□□□□□ -0.12
VEGFA-221ENST00000520265 DAAM2Q86T65 1068 aa14.28□□□□□ -0.12
VEGFA-221ENST00000520265 ZSWIM9Q86XI8 627 aa14.28□□□□□ -0.12
VEGFA-221ENST00000520265 TMTC1Q8IUR5 882 aa14.28□□□□□ -0.12
VEGFA-221ENST00000520265 NUDCD1Q96RS6 583 aa14.28□□□□□ -0.12
VEGFA-221ENST00000520265 DDX56Q9NY93 547 aaKnown RBP14.28□□□□□ -0.12
VEGFA-221ENST00000520265 SEPT10Q9P0V9 454 aa14.28□□□□□ -0.12
VEGFA-221ENST00000520265 KNL1Q8NG31 2342 aa14.27□□□□□ -0.12
VEGFA-221ENST00000520265 GOLGA6CA6NDK9 693 aa14.27□□□□□ -0.13
VEGFA-221ENST00000520265 GOLGA6BA6NDN3 693 aa14.27□□□□□ -0.13
VEGFA-221ENST00000520265 NDUFA10O95299 355 aa14.27□□□□□ -0.13
VEGFA-221ENST00000520265 TOP3BO95985 862 aaKnown RBP14.27□□□□□ -0.13
VEGFA-221ENST00000520265 GOLGA6DP0CG33 693 aa14.27□□□□□ -0.13
VEGFA-221ENST00000520265 NFKBIAP25963 317 aa14.27□□□□□ -0.13
VEGFA-221ENST00000520265 PMLP29590 882 aa14.27□□□□□ -0.13
VEGFA-221ENST00000520265 SUOXP51687 545 aa14.27□□□□□ -0.13
VEGFA-221ENST00000520265 EPHB1P54762 984 aa14.27□□□□□ -0.13
VEGFA-221ENST00000520265 NSUN2Q08J23 767 aaKnown RBP eCLIP14.27□□□□□ -0.13
VEGFA-221ENST00000520265 AP1B1Q10567 949 aa14.27□□□□□ -0.13
VEGFA-221ENST00000520265 ACOX1Q15067 660 aa14.27□□□□□ -0.13
VEGFA-221ENST00000520265 IRF4Q15306 451 aa14.27□□□□□ -0.13
VEGFA-221ENST00000520265 ABI3BPQ7Z7G0 1075 aa14.27□□□□□ -0.13
VEGFA-221ENST00000520265 LRRC49Q8IUZ0 686 aa14.27□□□□□ -0.13
VEGFA-221ENST00000520265 PGBD5Q8N414 524 aa14.27□□□□□ -0.13
VEGFA-221ENST00000520265 DENND6BQ8NEG7 585 aa14.27□□□□□ -0.13
VEGFA-221ENST00000520265 FAM71BQ8TC56 605 aa14.27□□□□□ -0.13
VEGFA-221ENST00000520265 CNDP2Q96KP4 475 aaKnown RBP14.27□□□□□ -0.13
VEGFA-221ENST00000520265 RNF157Q96PX1 679 aa14.27□□□□□ -0.13
VEGFA-221ENST00000520265 BAG1Q99933 345 aaPredicted RBP14.27□□□□□ -0.13
VEGFA-221ENST00000520265 SEMA3CQ99985 751 aa14.27□□□□□ -0.13
VEGFA-221ENST00000520265 MGME1Q9BQP7 344 aa14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms