RNA–Protein interactions for RNA: ENST00000520233.1

SDC2-205, Transcript of syndecan 2, humanhuman

TSL 4

Gene SDC2, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-205ENST00000520233 MID1O15344 667 aa17.94■□□□□ 0.46
SDC2-205ENST00000520233 SUN1O94901 812 aa17.94■□□□□ 0.46
SDC2-205ENST00000520233 DNTTP04053 509 aa17.94■□□□□ 0.46
SDC2-205ENST00000520233 PDHA1P08559 390 aa17.94■□□□□ 0.46
SDC2-205ENST00000520233 NDUFV2P19404 249 aa17.94■□□□□ 0.46
SDC2-205ENST00000520233 TNNT3P45378 269 aaPredicted RBP17.94■□□□□ 0.46
SDC2-205ENST00000520233 DRG2P55039 364 aaKnown RBP17.94■□□□□ 0.46
SDC2-205ENST00000520233 RPL26P61254 145 aaKnown RBP17.94■□□□□ 0.46
SDC2-205ENST00000520233 POLR2LP62875 67 aaKnown RBP17.94■□□□□ 0.46
SDC2-205ENST00000520233 CFAP58Q5T655 872 aa17.94■□□□□ 0.46
SDC2-205ENST00000520233 RNASEH2BQ5TBB1 312 aaKnown RBP17.94■□□□□ 0.46
SDC2-205ENST00000520233 IZUMO3Q5VZ72 239 aa17.94■□□□□ 0.46
SDC2-205ENST00000520233 NAPEPLDQ6IQ20 393 aa17.94■□□□□ 0.46
SDC2-205ENST00000520233 RANBP10Q6VN20 620 aa17.94■□□□□ 0.46
SDC2-205ENST00000520233 LINC00523Q86TU6 105 aa17.94■□□□□ 0.46
SDC2-205ENST00000520233 PPIL6Q8IXY8 311 aa17.94■□□□□ 0.46
SDC2-205ENST00000520233 CAMKK1Q8N5S9 505 aa17.94■□□□□ 0.46
SDC2-205ENST00000520233 BBOF1Q8ND07 529 aa17.94■□□□□ 0.46
SDC2-205ENST00000520233 PDCD6IPQ8WUM4 868 aaKnown RBP17.94■□□□□ 0.46
SDC2-205ENST00000520233 ARRDC3Q96B67 414 aa17.94■□□□□ 0.46
SDC2-205ENST00000520233 TBL1YQ9BQ87 522 aa17.94■□□□□ 0.46
SDC2-205ENST00000520233 FICDQ9BVA6 458 aa17.94■□□□□ 0.46
SDC2-205ENST00000520233 ADGRE3Q9BY15 652 aa17.94■□□□□ 0.46
SDC2-205ENST00000520233 SLC6A17Q9H1V8 727 aa17.94■□□□□ 0.46
SDC2-205ENST00000520233 PABPC3Q9H361 631 aaKnown RBP17.94■□□□□ 0.46
SDC2-205ENST00000520233 DYRK4Q9NR20 520 aa17.94■□□□□ 0.46
SDC2-205ENST00000520233 WHRNQ9P202 907 aa17.94■□□□□ 0.46
SDC2-205ENST00000520233 DMGDHQ9UI17 866 aaKnown RBP17.94■□□□□ 0.46
SDC2-205ENST00000520233 RPL26L1Q9UNX3 145 aaKnown RBP17.94■□□□□ 0.46
SDC2-205ENST00000520233 SNX24Q9Y343 169 aa17.94■□□□□ 0.46
SDC2-205ENST00000520233 ATG2BQ96BY7 2078 aa17.94■□□□□ 0.46
SDC2-205ENST00000520233 C16orf96A6NNT2 1141 aa17.93■□□□□ 0.46
SDC2-205ENST00000520233 BHMG1C9JSJ3 638 aaPredicted RBP17.93■□□□□ 0.46
SDC2-205ENST00000520233 SMAPO00193 183 aa17.93■□□□□ 0.46
SDC2-205ENST00000520233 SEC31AO94979 1220 aaKnown RBP17.93■□□□□ 0.46
SDC2-205ENST00000520233 NDST3O95803 873 aa17.93■□□□□ 0.46
SDC2-205ENST00000520233 CPP00450 1065 aa17.93■□□□□ 0.46
SDC2-205ENST00000520233 AGTP01019 485 aa17.93■□□□□ 0.46
SDC2-205ENST00000520233 ITIH2P19823 946 aa17.93■□□□□ 0.46
SDC2-205ENST00000520233 RPL21P46778 160 aaKnown RBP17.93■□□□□ 0.46
SDC2-205ENST00000520233 METAP1P53582 386 aa17.93■□□□□ 0.46
SDC2-205ENST00000520233 TERF1P54274 439 aa17.93■□□□□ 0.46
SDC2-205ENST00000520233 SFSWAPQ12872 951 aaKnown RBP17.93■□□□□ 0.46
SDC2-205ENST00000520233 SPARCL1Q14515 664 aa17.93■□□□□ 0.46
SDC2-205ENST00000520233 POM121L1PQ3SYA9 428 aa17.93■□□□□ 0.46
SDC2-205ENST00000520233 TEX35Q5T0J7 233 aa17.93■□□□□ 0.46
SDC2-205ENST00000520233 SYCP2LQ5T4T6 812 aa17.93■□□□□ 0.46
SDC2-205ENST00000520233 KDELC2Q7Z4H8 507 aa17.93■□□□□ 0.46
SDC2-205ENST00000520233 HOOK3Q86VS8 718 aa17.93■□□□□ 0.46
SDC2-205ENST00000520233 RASSF3Q86WH2 238 aa17.93■□□□□ 0.46
SDC2-205ENST00000520233 ZSWIM9Q86XI8 627 aa17.93■□□□□ 0.46
SDC2-205ENST00000520233 PAF1Q8N7H5 531 aa17.93■□□□□ 0.46
SDC2-205ENST00000520233 TMEM105Q8N8V8 129 aa17.93■□□□□ 0.46
SDC2-205ENST00000520233 NAT8LQ8N9F0 302 aa17.93■□□□□ 0.46
SDC2-205ENST00000520233 HMGB4Q8WW32 186 aa17.93■□□□□ 0.46
SDC2-205ENST00000520233 PIH1D2Q8WWB5 315 aa17.93■□□□□ 0.46
SDC2-205ENST00000520233 SEC14L1Q92503 715 aa17.93■□□□□ 0.46
SDC2-205ENST00000520233 HHIPQ96QV1 700 aa17.93■□□□□ 0.46
SDC2-205ENST00000520233 HDAC8Q9BY41 377 aa17.93■□□□□ 0.46
SDC2-205ENST00000520233 DPH5Q9H2P9 285 aa17.93■□□□□ 0.46
SDC2-205ENST00000520233 ARNT2Q9HBZ2 717 aa17.93■□□□□ 0.46
SDC2-205ENST00000520233 SPATA6Q9NWH7 488 aaPredicted RBP17.93■□□□□ 0.46
SDC2-205ENST00000520233 PHTF1Q9UMS5 762 aa17.93■□□□□ 0.46
SDC2-205ENST00000520233 PPIL1Q9Y3C6 166 aa17.93■□□□□ 0.46
SDC2-205ENST00000520233 TCRBV7S3A2A0A539 114 aa17.92■□□□□ 0.46
SDC2-205ENST00000520233 APBB3O95704 486 aa17.92■□□□□ 0.46
SDC2-205ENST00000520233 ATXN1LP0C7T5 689 aaKnown RBP17.92■□□□□ 0.46
SDC2-205ENST00000520233 ACADMP11310 421 aa17.92■□□□□ 0.46
SDC2-205ENST00000520233 HLA-DPA1P20036 260 aa17.92■□□□□ 0.46
SDC2-205ENST00000520233 DRD3P35462 400 aa17.92■□□□□ 0.46
SDC2-205ENST00000520233 SUOXP51687 545 aa17.92■□□□□ 0.46
SDC2-205ENST00000520233 NEK3P51956 506 aa17.92■□□□□ 0.46
SDC2-205ENST00000520233 GUCY2DQ02846 1103 aa17.92■□□□□ 0.46
SDC2-205ENST00000520233 OLIG2Q13516 323 aa17.92■□□□□ 0.46
SDC2-205ENST00000520233 SLC1A5Q15758 541 aa17.92■□□□□ 0.46
SDC2-205ENST00000520233 UGP2Q16851 508 aa17.92■□□□□ 0.46
SDC2-205ENST00000520233 TTC31Q49AM3 519 aaPredicted RBP17.92■□□□□ 0.46
SDC2-205ENST00000520233 ANKRD22Q5VYY1 191 aa17.92■□□□□ 0.46
SDC2-205ENST00000520233 ANO7Q6IWH7 933 aa17.92■□□□□ 0.46
SDC2-205ENST00000520233 HIBCHQ6NVY1 386 aaPredicted RBP17.92■□□□□ 0.46
SDC2-205ENST00000520233 KIAA1324Q6UXG2 1013 aaKnown RBP17.92■□□□□ 0.46
SDC2-205ENST00000520233 USP30Q70CQ3 517 aa17.92■□□□□ 0.46
SDC2-205ENST00000520233 ERN2Q76MJ5 926 aaKnown RBP17.92■□□□□ 0.46
SDC2-205ENST00000520233 PARS2Q7L3T8 475 aaKnown RBP17.92■□□□□ 0.46
SDC2-205ENST00000520233 CACUL1Q86Y37 369 aa17.92■□□□□ 0.46
SDC2-205ENST00000520233 NDUFAF2Q8N183 169 aa17.92■□□□□ 0.46
SDC2-205ENST00000520233 PGBD3Q8N328 593 aa17.92■□□□□ 0.46
SDC2-205ENST00000520233 AADATQ8N5Z0 425 aa17.92■□□□□ 0.46
SDC2-205ENST00000520233 MCUQ8NE86 351 aa17.92■□□□□ 0.46
SDC2-205ENST00000520233 LPCAT1Q8NF37 534 aa17.92■□□□□ 0.46
SDC2-205ENST00000520233 FAM131CQ96AQ9 280 aa17.92■□□□□ 0.46
SDC2-205ENST00000520233 RMDN1Q96DB5 314 aa17.92■□□□□ 0.46
SDC2-205ENST00000520233 GRHL1Q9NZI5 618 aa17.92■□□□□ 0.46
SDC2-205ENST00000520233 BCCIPQ9P287 314 aaKnown RBP eCLIP17.92■□□□□ 0.46
SDC2-205ENST00000520233 UPK3BL1B0FP48 263 aa17.91■□□□□ 0.46
SDC2-205ENST00000520233 ANKRD66B4E2M5 251 aa17.91■□□□□ 0.46
SDC2-205ENST00000520233 UPK3BL2E5RIL1 263 aa17.91■□□□□ 0.46
SDC2-205ENST00000520233 K7ESF4 209 aa17.91■□□□□ 0.46
SDC2-205ENST00000520233 USP12O75317 370 aa17.91■□□□□ 0.46
SDC2-205ENST00000520233 TMEM63AO94886 807 aa17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 153 ms