RNA–Protein interactions for RNA: ENST00000518882.2

PCDHGA11-202, Transcript of protocadherin gamma subfamily A, 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDHGA11, Length 2,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11-202ENST00000518882 CEPT1Q9Y6K0 416 aa16.7■□□□□ 0.26
PCDHGA11-202ENST00000518882 A8MT66 165 aa16.7■□□□□ 0.26
PCDHGA11-202ENST00000518882 PSMD12O00232 456 aaPredicted RBP16.7■□□□□ 0.26
PCDHGA11-202ENST00000518882 HNRNPRO43390 633 aaKnown RBP16.7■□□□□ 0.26
PCDHGA11-202ENST00000518882 PMPCBO75439 489 aa16.7■□□□□ 0.26
PCDHGA11-202ENST00000518882 TMCC1O94876 653 aa16.7■□□□□ 0.26
PCDHGA11-202ENST00000518882 PYGLP06737 847 aa16.7■□□□□ 0.26
PCDHGA11-202ENST00000518882 CPB1P15086 417 aa16.7■□□□□ 0.26
PCDHGA11-202ENST00000518882 ADRA1AP35348 466 aa16.7■□□□□ 0.26
PCDHGA11-202ENST00000518882 POLD2P49005 469 aa16.7■□□□□ 0.26
PCDHGA11-202ENST00000518882 TMEM259Q4ZIN3 620 aa16.7■□□□□ 0.26
PCDHGA11-202ENST00000518882 C6orf10Q5SRN2 563 aa16.7■□□□□ 0.26
PCDHGA11-202ENST00000518882 HMBOX1Q6NT76 420 aa16.7■□□□□ 0.26
PCDHGA11-202ENST00000518882 HERC6Q8IVU3 1022 aa16.7■□□□□ 0.26
PCDHGA11-202ENST00000518882 NLGN2Q8NFZ4 835 aa16.7■□□□□ 0.26
PCDHGA11-202ENST00000518882 OR9I1Q8NGQ6 314 aa16.7■□□□□ 0.26
PCDHGA11-202ENST00000518882 FAM110BQ8TC76 370 aa16.7■□□□□ 0.26
PCDHGA11-202ENST00000518882 DDI1Q8WTU0 396 aa16.7■□□□□ 0.26
PCDHGA11-202ENST00000518882 MEAF6Q9HAF1 191 aa16.7■□□□□ 0.26
PCDHGA11-202ENST00000518882 NDFIP2Q9NV92 336 aa16.7■□□□□ 0.26
PCDHGA11-202ENST00000518882 FBXO5Q9UKT4 447 aa16.7■□□□□ 0.26
PCDHGA11-202ENST00000518882 SNX13Q9Y5W8 968 aa16.7■□□□□ 0.26
PCDHGA11-202ENST00000518882 A0A087X1B8 175 aa16.69■□□□□ 0.26
PCDHGA11-202ENST00000518882 UBDO15205 165 aa16.69■□□□□ 0.26
PCDHGA11-202ENST00000518882 TREHO43280 583 aa16.69■□□□□ 0.26
PCDHGA11-202ENST00000518882 MAFKO60675 156 aa16.69■□□□□ 0.26
PCDHGA11-202ENST00000518882 MT-CO1P00395 513 aa16.69■□□□□ 0.26
PCDHGA11-202ENST00000518882 CDH2P19022 906 aaPredicted RBP16.69■□□□□ 0.26
PCDHGA11-202ENST00000518882 CCNCP24863 283 aa16.69■□□□□ 0.26
PCDHGA11-202ENST00000518882 TXNL4AP83876 142 aaKnown RBP16.69■□□□□ 0.26
PCDHGA11-202ENST00000518882 LAYNQ6UX15 382 aa16.69■□□□□ 0.26
PCDHGA11-202ENST00000518882 CUZD1Q86UP6 607 aa16.69■□□□□ 0.26
PCDHGA11-202ENST00000518882 NUP93Q8N1F7 819 aa16.69■□□□□ 0.26
PCDHGA11-202ENST00000518882 MYO1HQ8N1T3 1032 aa16.69■□□□□ 0.26
PCDHGA11-202ENST00000518882 ATPAF2Q8N5M1 289 aa16.69■□□□□ 0.26
PCDHGA11-202ENST00000518882 RNF34Q969K3 372 aa16.69■□□□□ 0.26
PCDHGA11-202ENST00000518882 CIB1Q99828 191 aa16.69■□□□□ 0.26
PCDHGA11-202ENST00000518882 PREBQ9HCU5 417 aa16.69■□□□□ 0.26
PCDHGA11-202ENST00000518882 CD300AQ9UGN4 299 aa16.69■□□□□ 0.26
PCDHGA11-202ENST00000518882 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.69■□□□□ 0.26
PCDHGA11-202ENST00000518882 COL4A4P53420 1690 aaPredicted RBP16.69■□□□□ 0.26
PCDHGA11-202ENST00000518882 ARHGEF37A1IGU5 675 aa16.68■□□□□ 0.26
PCDHGA11-202ENST00000518882 HEATR9A2RTY3 570 aa16.68■□□□□ 0.26
PCDHGA11-202ENST00000518882 HLA-DQB2P05538 268 aa16.68■□□□□ 0.26
PCDHGA11-202ENST00000518882 RANBP1P43487 201 aa16.68■□□□□ 0.26
PCDHGA11-202ENST00000518882 PFKPQ01813 784 aa16.68■□□□□ 0.26
PCDHGA11-202ENST00000518882 STX5Q13190 355 aa16.68■□□□□ 0.26
PCDHGA11-202ENST00000518882 SEPT6Q14141 434 aa16.68■□□□□ 0.26
PCDHGA11-202ENST00000518882 SQLEQ14534 574 aa16.68■□□□□ 0.26
PCDHGA11-202ENST00000518882 TBC1D25Q3MII6 688 aa16.68■□□□□ 0.26
PCDHGA11-202ENST00000518882 CYHR1Q6ZMK1 362 aa16.68■□□□□ 0.26
PCDHGA11-202ENST00000518882 CARM1Q86X55 608 aa16.68■□□□□ 0.26
PCDHGA11-202ENST00000518882 C3orf58Q8NDZ4 430 aa16.68■□□□□ 0.26
PCDHGA11-202ENST00000518882 TSPAN14Q8NG11 270 aa16.68■□□□□ 0.26
PCDHGA11-202ENST00000518882 TMIGD2Q96BF3 282 aa16.68■□□□□ 0.26
PCDHGA11-202ENST00000518882 PHF21BQ96EK2 531 aa16.68■□□□□ 0.26
PCDHGA11-202ENST00000518882 IL12RB2Q99665 862 aa16.68■□□□□ 0.26
PCDHGA11-202ENST00000518882 SLC39A3Q9BRY0 314 aa16.68■□□□□ 0.26
PCDHGA11-202ENST00000518882 PADI4Q9UM07 663 aa16.68■□□□□ 0.26
PCDHGA11-202ENST00000518882 TCRBV3S1A0A5B6 114 aa16.68■□□□□ 0.26
PCDHGA11-202ENST00000518882 BTBD19C9JJ37 291 aa16.68■□□□□ 0.26
PCDHGA11-202ENST00000518882 UBFD1O14562 309 aaKnown RBP16.68■□□□□ 0.26
PCDHGA11-202ENST00000518882 DYNC1LI2O43237 492 aaPredicted RBP16.68■□□□□ 0.26
PCDHGA11-202ENST00000518882 ANXA9O76027 345 aa16.68■□□□□ 0.26
PCDHGA11-202ENST00000518882 IPO13O94829 963 aaKnown RBP16.68■□□□□ 0.26
PCDHGA11-202ENST00000518882 F2P00734 622 aa16.68■□□□□ 0.26
PCDHGA11-202ENST00000518882 CDK4P11802 303 aa16.68■□□□□ 0.26
PCDHGA11-202ENST00000518882 YWHAQP27348 245 aa16.68■□□□□ 0.26
PCDHGA11-202ENST00000518882 COG7P83436 770 aa16.68■□□□□ 0.26
PCDHGA11-202ENST00000518882 POU4F1Q01851 419 aa16.68■□□□□ 0.26
PCDHGA11-202ENST00000518882 BORAQ6PGQ7 559 aa16.68■□□□□ 0.26
PCDHGA11-202ENST00000518882 POTEHQ6S545 545 aa16.68■□□□□ 0.26
PCDHGA11-202ENST00000518882 MAML3Q96JK9 1138 aa16.68■□□□□ 0.26
PCDHGA11-202ENST00000518882 MRGPRX2Q96LB1 330 aa16.68■□□□□ 0.26
PCDHGA11-202ENST00000518882 TSPAN18Q96SJ8 248 aa16.68■□□□□ 0.26
PCDHGA11-202ENST00000518882 SLC39A8Q9C0K1 460 aa16.68■□□□□ 0.26
PCDHGA11-202ENST00000518882 TSPYL2Q9H2G4 693 aaPredicted RBP16.68■□□□□ 0.26
PCDHGA11-202ENST00000518882 NOL11Q9H8H0 719 aaKnown RBP16.68■□□□□ 0.26
PCDHGA11-202ENST00000518882 SPAG4Q9NPE6 437 aa16.68■□□□□ 0.26
PCDHGA11-202ENST00000518882 CAMSAP3Q9P1Y5 1249 aaPredicted RBP16.68■□□□□ 0.26
PCDHGA11-202ENST00000518882 MTF2Q9Y483 593 aaPredicted RBP16.68■□□□□ 0.26
PCDHGA11-202ENST00000518882 PLOD2O00469 737 aa16.67■□□□□ 0.26
PCDHGA11-202ENST00000518882 TSPAN8P19075 237 aa16.67■□□□□ 0.26
PCDHGA11-202ENST00000518882 SLC12A2P55011 1212 aa16.67■□□□□ 0.26
PCDHGA11-202ENST00000518882 ZNF33AQ06730 810 aa16.67■□□□□ 0.26
PCDHGA11-202ENST00000518882 PITRM1Q5JRX3 1037 aa16.67■□□□□ 0.26
PCDHGA11-202ENST00000518882 OLFML2BQ68BL8 750 aa16.67■□□□□ 0.26
PCDHGA11-202ENST00000518882 CLEC6AQ6EIG7 209 aa16.67■□□□□ 0.26
PCDHGA11-202ENST00000518882 TWF2Q6IBS0 349 aaKnown RBP16.67■□□□□ 0.26
PCDHGA11-202ENST00000518882 NEPROQ6NW34 567 aa16.67■□□□□ 0.26
PCDHGA11-202ENST00000518882 ZNF467Q7Z7K2 595 aaPredicted RBP16.67■□□□□ 0.26
PCDHGA11-202ENST00000518882 DPP9Q86TI2 863 aa16.67■□□□□ 0.26
PCDHGA11-202ENST00000518882 DQX1Q8TE96 717 aaKnown RBP16.67■□□□□ 0.26
PCDHGA11-202ENST00000518882 TOP1MTQ969P6 601 aa16.67■□□□□ 0.26
PCDHGA11-202ENST00000518882 SPON1Q9HCB6 807 aa16.67■□□□□ 0.26
PCDHGA11-202ENST00000518882 FBRSL1Q9HCM7 1045 aaKnown RBP16.67■□□□□ 0.26
PCDHGA11-202ENST00000518882 RRN3Q9NYV6 651 aa16.67■□□□□ 0.26
PCDHGA11-202ENST00000518882 CNOT6Q9ULM6 557 aaKnown RBP16.67■□□□□ 0.26
PCDHGA11-202ENST00000518882 TTC3P53804 2025 aa16.67■□□□□ 0.26
PCDHGA11-202ENST00000518882 ATP6AP2A0A1C7CYW4 349 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms