RNA–Protein interactions for RNA: ENST00000518344.1

FAM49B-208, Transcript of family with sequence similarity 49 member B, humanhuman

TSL 3

Gene FAM49B, Length 554 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49B-208ENST00000518344 ZSCAN30Q86W11 494 aa18.84■□□□□ 0.61
FAM49B-208ENST00000518344 SPATS2Q86XZ4 545 aaKnown RBP18.84■□□□□ 0.61
FAM49B-208ENST00000518344 CCNYQ8ND76 341 aa18.84■□□□□ 0.61
FAM49B-208ENST00000518344 ACRBPQ8NEB7 543 aa18.84■□□□□ 0.61
FAM49B-208ENST00000518344 RHBDD1Q8TEB9 315 aa18.84■□□□□ 0.61
FAM49B-208ENST00000518344 C1QTNF2Q9BXJ5 285 aa18.84■□□□□ 0.61
FAM49B-208ENST00000518344 NT5MQ9NPB1 228 aa18.84■□□□□ 0.61
FAM49B-208ENST00000518344 PCDH12Q9NPG4 1184 aa18.84■□□□□ 0.61
FAM49B-208ENST00000518344 PCDHGB2Q9Y5G2 931 aa18.84■□□□□ 0.61
FAM49B-208ENST00000518344 HEY1Q9Y5J3 304 aa18.84■□□□□ 0.61
FAM49B-208ENST00000518344 HS3ST3A1Q9Y663 406 aa18.84■□□□□ 0.61
FAM49B-208ENST00000518344 A0A1B0GTQ1 180 aa18.83■□□□□ 0.6
FAM49B-208ENST00000518344 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP18.83■□□□□ 0.6
FAM49B-208ENST00000518344 SPAARA0A1B0GVQ0 90 aa18.83■□□□□ 0.6
FAM49B-208ENST00000518344 APOL1O14791 398 aa18.83■□□□□ 0.6
FAM49B-208ENST00000518344 TM7SF2O76062 418 aa18.83■□□□□ 0.6
FAM49B-208ENST00000518344 PRKCGP05129 697 aa18.83■□□□□ 0.6
FAM49B-208ENST00000518344 MX2P20592 715 aa18.83■□□□□ 0.6
FAM49B-208ENST00000518344 CCNCP24863 283 aa18.83■□□□□ 0.6
FAM49B-208ENST00000518344 SEMG2Q02383 582 aa18.83■□□□□ 0.6
FAM49B-208ENST00000518344 SLC10A2Q12908 348 aaPredicted RBP18.83■□□□□ 0.6
FAM49B-208ENST00000518344 HNRNPDQ14103 355 aaKnown RBP18.83■□□□□ 0.6
FAM49B-208ENST00000518344 TMEM52BQ4KMG9 183 aa18.83■□□□□ 0.6
FAM49B-208ENST00000518344 TIGD7Q6NT04 549 aaPredicted RBP18.83■□□□□ 0.6
FAM49B-208ENST00000518344 ZSWIM9Q86XI8 627 aa18.83■□□□□ 0.6
FAM49B-208ENST00000518344 RFX6Q8HWS3 928 aa18.83■□□□□ 0.6
FAM49B-208ENST00000518344 OR13H1Q8NG92 308 aa18.83■□□□□ 0.6
FAM49B-208ENST00000518344 PDCD6IPQ8WUM4 868 aaKnown RBP18.83■□□□□ 0.6
FAM49B-208ENST00000518344 BMFQ96LC9 184 aa18.83■□□□□ 0.6
FAM49B-208ENST00000518344 NSMCE3Q96MG7 304 aa18.83■□□□□ 0.6
FAM49B-208ENST00000518344 ZNF830Q96NB3 372 aaPredicted RBP18.83■□□□□ 0.6
FAM49B-208ENST00000518344 NUDCD1Q96RS6 583 aa18.83■□□□□ 0.6
FAM49B-208ENST00000518344 NOD2Q9HC29 1040 aa18.83■□□□□ 0.6
FAM49B-208ENST00000518344 DTLQ9NZJ0 730 aa18.83■□□□□ 0.6
FAM49B-208ENST00000518344 PCDHGC4Q9Y5F7 938 aa18.83■□□□□ 0.6
FAM49B-208ENST00000518344 DUSP10Q9Y6W6 482 aa18.83■□□□□ 0.6
FAM49B-208ENST00000518344 GOLGA6L6A8MZA4 724 aa18.82■□□□□ 0.6
FAM49B-208ENST00000518344 ZNF487B1APH4 448 aa18.82■□□□□ 0.6
FAM49B-208ENST00000518344 RIOK3O14730 519 aaKnown RBP18.82■□□□□ 0.6
FAM49B-208ENST00000518344 FPGTO14772 594 aa18.82■□□□□ 0.6
FAM49B-208ENST00000518344 MATN3O15232 486 aa18.82■□□□□ 0.6
FAM49B-208ENST00000518344 NEBLO76041 1014 aa18.82■□□□□ 0.6
FAM49B-208ENST00000518344 ADRB1P08588 477 aa18.82■□□□□ 0.6
FAM49B-208ENST00000518344 CR2P20023 1033 aa18.82■□□□□ 0.6
FAM49B-208ENST00000518344 ARRB1P49407 418 aaPredicted RBP18.82■□□□□ 0.6
FAM49B-208ENST00000518344 POLR2LP62875 67 aaKnown RBP18.82■□□□□ 0.6
FAM49B-208ENST00000518344 FAM193AP78312 1265 aa18.82■□□□□ 0.6
FAM49B-208ENST00000518344 SIM1P81133 766 aaPredicted RBP18.82■□□□□ 0.6
FAM49B-208ENST00000518344 TRIP6Q15654 476 aaKnown RBP18.82■□□□□ 0.6
FAM49B-208ENST00000518344 MFSD7Q6UXD7 560 aa18.82■□□□□ 0.6
FAM49B-208ENST00000518344 GCNT7Q6ZNI0 430 aa18.82■□□□□ 0.6
FAM49B-208ENST00000518344 Q6ZSR6 202 aa18.82■□□□□ 0.6
FAM49B-208ENST00000518344 PTAR1Q7Z6K3 402 aaPredicted RBP18.82■□□□□ 0.6
FAM49B-208ENST00000518344 DAAM2Q86T65 1068 aa18.82■□□□□ 0.6
FAM49B-208ENST00000518344 KIAA1328Q86T90 577 aa18.82■□□□□ 0.6
FAM49B-208ENST00000518344 GATAD2AQ86YP4 633 aa18.82■□□□□ 0.6
FAM49B-208ENST00000518344 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP18.82■□□□□ 0.6
FAM49B-208ENST00000518344 TEX26Q8N6G2 289 aa18.82■□□□□ 0.6
FAM49B-208ENST00000518344 TPCN2Q8NHX9 752 aa18.82■□□□□ 0.6
FAM49B-208ENST00000518344 TSGA13Q96PP4 275 aa18.82■□□□□ 0.6
FAM49B-208ENST00000518344 LENG8Q96PV6 779 aaPredicted RBP18.82■□□□□ 0.6
FAM49B-208ENST00000518344 MGME1Q9BQP7 344 aa18.82■□□□□ 0.6
FAM49B-208ENST00000518344 ERVMER34-1Q9H9K5 563 aa18.82■□□□□ 0.6
FAM49B-208ENST00000518344 RBM22Q9NW64 420 aaKnown RBP eCLIP18.82■□□□□ 0.6
FAM49B-208ENST00000518344 SALL4Q9UJQ4 1053 aa18.82■□□□□ 0.6
FAM49B-208ENST00000518344 ATP8A1Q9Y2Q0 1164 aa18.82■□□□□ 0.6
FAM49B-208ENST00000518344 REXO2Q9Y3B8 237 aaKnown RBP18.82■□□□□ 0.6
FAM49B-208ENST00000518344 TTLL3Q9Y4R7 772 aa18.82■□□□□ 0.6
FAM49B-208ENST00000518344 POM121BA6NF01 834 aa18.81■□□□□ 0.6
FAM49B-208ENST00000518344 A6NNZ2 444 aa18.81■□□□□ 0.6
FAM49B-208ENST00000518344 TRAFD1O14545 582 aaPredicted RBP18.81■□□□□ 0.6
FAM49B-208ENST00000518344 FLRT2O43155 660 aa18.81■□□□□ 0.6
FAM49B-208ENST00000518344 PSTPIP1O43586 416 aa18.81■□□□□ 0.6
FAM49B-208ENST00000518344 PCDHGA12O60330 932 aa18.81■□□□□ 0.6
FAM49B-208ENST00000518344 ITGAVP06756 1048 aa18.81■□□□□ 0.6
FAM49B-208ENST00000518344 CCNB1P14635 433 aa18.81■□□□□ 0.6
FAM49B-208ENST00000518344 ZFXP17010 805 aaPredicted RBP18.81■□□□□ 0.6
FAM49B-208ENST00000518344 DYNLT1P63172 113 aa18.81■□□□□ 0.6
FAM49B-208ENST00000518344 LLGL1Q15334 1064 aa18.81■□□□□ 0.6
FAM49B-208ENST00000518344 SHBQ15464 509 aa18.81■□□□□ 0.6
FAM49B-208ENST00000518344 SLC9A4Q6AI14 798 aa18.81■□□□□ 0.6
FAM49B-208ENST00000518344 C11orf63Q6NUN7 778 aa18.81■□□□□ 0.6
FAM49B-208ENST00000518344 NPNTQ6UXI9 565 aa18.81■□□□□ 0.6
FAM49B-208ENST00000518344 DBX2Q6ZNG2 339 aa18.81■□□□□ 0.6
FAM49B-208ENST00000518344 ABI3BPQ7Z7G0 1075 aa18.81■□□□□ 0.6
FAM49B-208ENST00000518344 VSIG1Q86XK7 387 aa18.81■□□□□ 0.6
FAM49B-208ENST00000518344 TMEM139Q8IV31 216 aa18.81■□□□□ 0.6
FAM49B-208ENST00000518344 CCDC13Q8IYE1 715 aa18.81■□□□□ 0.6
FAM49B-208ENST00000518344 OXR1Q8N573 874 aa18.81■□□□□ 0.6
FAM49B-208ENST00000518344 PLD5Q8N7P1 536 aa18.81■□□□□ 0.6
FAM49B-208ENST00000518344 ASB12Q8WXK4 309 aa18.81■□□□□ 0.6
FAM49B-208ENST00000518344 ECHDC3Q96DC8 303 aa18.81■□□□□ 0.6
FAM49B-208ENST00000518344 PCOLCE2Q9UKZ9 415 aa18.81■□□□□ 0.6
FAM49B-208ENST00000518344 BTBD3Q9Y2F9 522 aa18.81■□□□□ 0.6
FAM49B-208ENST00000518344 COQ6Q9Y2Z9 468 aa18.81■□□□□ 0.6
FAM49B-208ENST00000518344 A8MX80 341 aa18.8■□□□□ 0.6
FAM49B-208ENST00000518344 LZTS3O60299 673 aaPredicted RBP18.8■□□□□ 0.6
FAM49B-208ENST00000518344 KRT10P13645 584 aa18.8■□□□□ 0.6
FAM49B-208ENST00000518344 LIG3P49916 1009 aa18.8■□□□□ 0.6
FAM49B-208ENST00000518344 VAV2P52735 878 aa18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms