RNA–Protein interactions for RNA: ENST00000516956.1

SCARNA16.4-201, small Cajal body-specific RNA 16, humanhuman

BASIC

Gene SCARNA16, Length 187 nt, Biotype scaRNA, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA16.4-201ENST00000516956 SGK2Q9HBY8 427 aa5.5□□□□□ -1.53
SCARNA16.4-201ENST00000516956 NOD2Q9HC29 1040 aa5.5□□□□□ -1.53
SCARNA16.4-201ENST00000516956 ITM2CQ9NQX7 267 aa5.5□□□□□ -1.53
SCARNA16.4-201ENST00000516956 ZSCAN32Q9NX65 697 aa5.5□□□□□ -1.53
SCARNA16.4-201ENST00000516956 SMARCAL1Q9NZC9 954 aa5.5□□□□□ -1.53
SCARNA16.4-201ENST00000516956 UBP1Q9NZI7 540 aa5.5□□□□□ -1.53
SCARNA16.4-201ENST00000516956 DLGAP2Q9P1A6 1054 aa5.5□□□□□ -1.53
SCARNA16.4-201ENST00000516956 DKK3Q9UBP4 350 aa5.5□□□□□ -1.53
SCARNA16.4-201ENST00000516956 EBF1Q9UH73 591 aa5.5□□□□□ -1.53
SCARNA16.4-201ENST00000516956 PPM1HQ9ULR3 514 aa5.5□□□□□ -1.53
SCARNA16.4-201ENST00000516956 FZD4Q9ULV1 537 aa5.5□□□□□ -1.53
SCARNA16.4-201ENST00000516956 TPX2Q9ULW0 747 aaKnown RBP5.5□□□□□ -1.53
SCARNA16.4-201ENST00000516956 PHTF1Q9UMS5 762 aa5.5□□□□□ -1.53
SCARNA16.4-201ENST00000516956 RPL26L1Q9UNX3 145 aaKnown RBP5.5□□□□□ -1.53
SCARNA16.4-201ENST00000516956 CHKBQ9Y259 395 aa5.5□□□□□ -1.53
SCARNA16.4-201ENST00000516956 UTP11Q9Y3A2 253 aaKnown RBP5.5□□□□□ -1.53
SCARNA16.4-201ENST00000516956 PCDHGC4Q9Y5F7 938 aa5.5□□□□□ -1.53
SCARNA16.4-201ENST00000516956 COL4A2P08572 1712 aa5.49□□□□□ -1.53
SCARNA16.4-201ENST00000516956 KIAA1549LQ6ZVL6 1849 aa5.49□□□□□ -1.53
SCARNA16.4-201ENST00000516956 FAM187AA6NFU0 413 aa5.49□□□□□ -1.53
SCARNA16.4-201ENST00000516956 C2orf81A6NN90 581 aa5.49□□□□□ -1.53
SCARNA16.4-201ENST00000516956 UPK3BL1B0FP48 263 aa5.49□□□□□ -1.53
SCARNA16.4-201ENST00000516956 UPK3BL2E5RIL1 263 aa5.49□□□□□ -1.53
SCARNA16.4-201ENST00000516956 TSPAN6O43657 245 aa5.49□□□□□ -1.53
SCARNA16.4-201ENST00000516956 HEXIM1O94992 359 aaKnown RBP5.49□□□□□ -1.53
SCARNA16.4-201ENST00000516956 FSBPO95073 299 aa5.49□□□□□ -1.53
SCARNA16.4-201ENST00000516956 CRTAMO95727 393 aa5.49□□□□□ -1.53
SCARNA16.4-201ENST00000516956 SEMA4FO95754 770 aa5.49□□□□□ -1.53
SCARNA16.4-201ENST00000516956 NDST3O95803 873 aa5.49□□□□□ -1.53
SCARNA16.4-201ENST00000516956 PEX11BO96011 259 aa5.49□□□□□ -1.53
SCARNA16.4-201ENST00000516956 EPOP01588 193 aa5.49□□□□□ -1.53
SCARNA16.4-201ENST00000516956 SLC4A1P02730 911 aa5.49□□□□□ -1.53
SCARNA16.4-201ENST00000516956 FGF1P05230 155 aa5.49□□□□□ -1.53
SCARNA16.4-201ENST00000516956 APRTP07741 180 aa5.49□□□□□ -1.53
SCARNA16.4-201ENST00000516956 ELFN1P0C7U0 828 aa5.49□□□□□ -1.53
SCARNA16.4-201ENST00000516956 SP9P0CG40 484 aa5.49□□□□□ -1.53
SCARNA16.4-201ENST00000516956 ADRB3P13945 408 aa5.49□□□□□ -1.53
SCARNA16.4-201ENST00000516956 GNSP15586 552 aa5.49□□□□□ -1.53
SCARNA16.4-201ENST00000516956 HLA-DPA1P20036 260 aa5.49□□□□□ -1.53
SCARNA16.4-201ENST00000516956 PSMB4P28070 264 aa5.49□□□□□ -1.53
SCARNA16.4-201ENST00000516956 HOXA6P31267 233 aa5.49□□□□□ -1.53
SCARNA16.4-201ENST00000516956 RPL22P35268 128 aaKnown RBP5.49□□□□□ -1.53
SCARNA16.4-201ENST00000516956 P2RY2P41231 377 aa5.49□□□□□ -1.53
SCARNA16.4-201ENST00000516956 DPP6P42658 865 aa5.49□□□□□ -1.53
SCARNA16.4-201ENST00000516956 RGRP47804 291 aa5.49□□□□□ -1.53
SCARNA16.4-201ENST00000516956 GRIA4P48058 902 aa5.49□□□□□ -1.53
SCARNA16.4-201ENST00000516956 DHPSP49366 369 aaPredicted RBP5.49□□□□□ -1.53
SCARNA16.4-201ENST00000516956 COPAP53621 1224 aa5.49□□□□□ -1.53
SCARNA16.4-201ENST00000516956 PTPN5P54829 565 aa5.49□□□□□ -1.53
SCARNA16.4-201ENST00000516956 RPS21P63220 83 aaKnown RBP5.49□□□□□ -1.53
SCARNA16.4-201ENST00000516956 SKOR1P84550 965 aa5.49□□□□□ -1.53
SCARNA16.4-201ENST00000516956 CDK16Q00536 496 aa5.49□□□□□ -1.53
SCARNA16.4-201ENST00000516956 PDE1BQ01064 536 aa5.49□□□□□ -1.53
SCARNA16.4-201ENST00000516956 C2orf54Q08AI8 447 aa5.49□□□□□ -1.53
SCARNA16.4-201ENST00000516956 NIPAL4Q0D2K0 466 aa5.49□□□□□ -1.53
SCARNA16.4-201ENST00000516956 SIM2Q14190 667 aaPredicted RBP5.49□□□□□ -1.53
SCARNA16.4-201ENST00000516956 GAS6Q14393 721 aa5.49□□□□□ -1.53
SCARNA16.4-201ENST00000516956 ACOX1Q15067 660 aa5.49□□□□□ -1.53
SCARNA16.4-201ENST00000516956 OASLQ15646 514 aaKnown RBP5.49□□□□□ -1.53
SCARNA16.4-201ENST00000516956 CYP1B1Q16678 543 aa5.49□□□□□ -1.53
SCARNA16.4-201ENST00000516956 UGP2Q16851 508 aa5.49□□□□□ -1.53
SCARNA16.4-201ENST00000516956 WDR45BQ5MNZ6 344 aa5.49□□□□□ -1.53
SCARNA16.4-201ENST00000516956 ARTNQ5T4W7 220 aa5.49□□□□□ -1.53
SCARNA16.4-201ENST00000516956 DENND2CQ68D51 928 aa5.49□□□□□ -1.53
SCARNA16.4-201ENST00000516956 NEK5Q6P3R8 708 aa5.49□□□□□ -1.53
SCARNA16.4-201ENST00000516956 PGBD5Q8N414 524 aa5.49□□□□□ -1.53
SCARNA16.4-201ENST00000516956 SLC25A41Q8N5S1 370 aa5.49□□□□□ -1.53
SCARNA16.4-201ENST00000516956 CNTD1Q8N815 330 aa5.49□□□□□ -1.53
SCARNA16.4-201ENST00000516956 OR2T34Q8NGX1 318 aa5.49□□□□□ -1.53
SCARNA16.4-201ENST00000516956 SPATA22Q8NHS9 363 aa5.49□□□□□ -1.53
SCARNA16.4-201ENST00000516956 RLN3Q8WXF3 142 aa5.49□□□□□ -1.53
SCARNA16.4-201ENST00000516956 ATOH1Q92858 354 aaPredicted RBP5.49□□□□□ -1.53
SCARNA16.4-201ENST00000516956 TOE1Q96GM8 510 aaKnown RBP5.49□□□□□ -1.53
SCARNA16.4-201ENST00000516956 TBL1YQ9BQ87 522 aa5.49□□□□□ -1.53
SCARNA16.4-201ENST00000516956 FICDQ9BVA6 458 aa5.49□□□□□ -1.53
SCARNA16.4-201ENST00000516956 GPR174Q9BXC1 333 aa5.49□□□□□ -1.53
SCARNA16.4-201ENST00000516956 MKRN2Q9H000 416 aaKnown RBP5.49□□□□□ -1.53
SCARNA16.4-201ENST00000516956 MIR1-1HGQ9H1L0 117 aa5.49□□□□□ -1.53
SCARNA16.4-201ENST00000516956 SLC6A17Q9H1V8 727 aa5.49□□□□□ -1.53
SCARNA16.4-201ENST00000516956 NEUROG2Q9H2A3 272 aa5.49□□□□□ -1.53
SCARNA16.4-201ENST00000516956 KDM4CQ9H3R0 1056 aa5.49□□□□□ -1.53
SCARNA16.4-201ENST00000516956 USP29Q9HBJ7 922 aa5.49□□□□□ -1.53
SCARNA16.4-201ENST00000516956 PREBQ9HCU5 417 aa5.49□□□□□ -1.53
SCARNA16.4-201ENST00000516956 PRMT8Q9NR22 394 aaPredicted RBP5.49□□□□□ -1.53
SCARNA16.4-201ENST00000516956 RAD18Q9NS91 495 aa5.49□□□□□ -1.53
SCARNA16.4-201ENST00000516956 POLR3BQ9NW08 1133 aaPredicted RBP5.49□□□□□ -1.53
SCARNA16.4-201ENST00000516956 KCTD5Q9NXV2 234 aa5.49□□□□□ -1.53
SCARNA16.4-201ENST00000516956 BFARQ9NZS9 450 aa5.49□□□□□ -1.53
SCARNA16.4-201ENST00000516956 HACD3Q9P035 362 aa5.49□□□□□ -1.53
SCARNA16.4-201ENST00000516956 SAMD15Q9P1V8 674 aa5.49□□□□□ -1.53
SCARNA16.4-201ENST00000516956 ANAPC5Q9UJX4 755 aa5.49□□□□□ -1.53
SCARNA16.4-201ENST00000516956 HCN2Q9UL51 889 aa5.49□□□□□ -1.53
SCARNA16.4-201ENST00000516956 INVSQ9Y283 1065 aa5.49□□□□□ -1.53
SCARNA16.4-201ENST00000516956 PCDHGA2Q9Y5H1 932 aa5.49□□□□□ -1.53
SCARNA16.4-201ENST00000516956 WASF2Q9Y6W5 498 aa5.49□□□□□ -1.53
SCARNA16.4-201ENST00000516956 MYOFQ9NZM1 2061 aa5.49□□□□□ -1.53
SCARNA16.4-201ENST00000516956 MIA3Q5JRA6 1907 aa5.48□□□□□ -1.53
SCARNA16.4-201ENST00000516956 DOCK4Q8N1I0 1966 aa5.48□□□□□ -1.53
SCARNA16.4-201ENST00000516956 C1orf232A0A0U1RR37 186 aa5.48□□□□□ -1.53
SCARNA16.4-201ENST00000516956 ANTXRLA6NF34 631 aa5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms