RNA–Protein interactions for RNA: ENST00000515753.1

HERC4-215, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 589 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-215ENST00000515753 CNTFP26441 200 aa3.41□□□□□ -1.86
HERC4-215ENST00000515753 HOXD3P31249 432 aaPredicted RBP3.41□□□□□ -1.86
HERC4-215ENST00000515753 DCTDP32321 178 aa3.41□□□□□ -1.86
HERC4-215ENST00000515753 HNF1BP35680 557 aa3.41□□□□□ -1.86
HERC4-215ENST00000515753 LIFRP42702 1097 aa3.41□□□□□ -1.86
HERC4-215ENST00000515753 CENPAP49450 140 aa3.41□□□□□ -1.86
HERC4-215ENST00000515753 LTBQ06643 244 aa3.41□□□□□ -1.86
HERC4-215ENST00000515753 TRAF1Q13077 416 aa3.41□□□□□ -1.86
HERC4-215ENST00000515753 CCDC96Q2M329 555 aa3.41□□□□□ -1.86
HERC4-215ENST00000515753 GFI1BQ5VTD9 330 aa3.41□□□□□ -1.86
HERC4-215ENST00000515753 C16orf54Q6UWD8 224 aa3.41□□□□□ -1.86
HERC4-215ENST00000515753 NEK10Q6ZWH5 1172 aa3.41□□□□□ -1.86
HERC4-215ENST00000515753 CTU1Q7Z7A3 348 aaKnown RBP3.41□□□□□ -1.86
HERC4-215ENST00000515753 PATL1Q86TB9 770 aaKnown RBP3.41□□□□□ -1.86
HERC4-215ENST00000515753 CUZD1Q86UP6 607 aa3.41□□□□□ -1.86
HERC4-215ENST00000515753 RBFAQ8N0V3 343 aa3.41□□□□□ -1.86
HERC4-215ENST00000515753 HORMAD2Q8N7B1 307 aa3.41□□□□□ -1.86
HERC4-215ENST00000515753 PRR26Q8N8Z3 221 aa3.41□□□□□ -1.86
HERC4-215ENST00000515753 CEP70Q8NHQ1 597 aa3.41□□□□□ -1.86
HERC4-215ENST00000515753 ELP5Q8TE02 316 aa3.41□□□□□ -1.86
HERC4-215ENST00000515753 WFIKKN2Q8TEU8 576 aa3.41□□□□□ -1.86
HERC4-215ENST00000515753 SLC35F5Q8WV83 523 aa3.41□□□□□ -1.86
HERC4-215ENST00000515753 RNFT2Q96EX2 444 aa3.41□□□□□ -1.86
HERC4-215ENST00000515753 RBM17Q96I25 401 aaKnown RBP3.41□□□□□ -1.86
HERC4-215ENST00000515753 CTDSP1Q9GZU7 261 aa3.41□□□□□ -1.86
HERC4-215ENST00000515753 ACAD9Q9H845 621 aa3.41□□□□□ -1.86
HERC4-215ENST00000515753 TTC12Q9H892 705 aaPredicted RBP3.41□□□□□ -1.86
HERC4-215ENST00000515753 NSMCE4AQ9NXX6 385 aa3.41□□□□□ -1.86
HERC4-215ENST00000515753 MYO6Q9UM54 1294 aa3.41□□□□□ -1.86
HERC4-215ENST00000515753 SRPRBQ9Y5M8 271 aaKnown RBP3.41□□□□□ -1.86
HERC4-215ENST00000515753 INSL5Q9Y5Q6 135 aa3.41□□□□□ -1.86
HERC4-215ENST00000515753 TEX14Q8IWB6 1497 aa3.41□□□□□ -1.86
HERC4-215ENST00000515753 ABCA5Q8WWZ7 1642 aa3.41□□□□□ -1.86
HERC4-215ENST00000515753 A0A087X0M5 115 aa3.4□□□□□ -1.87
HERC4-215ENST00000515753 A0A096LPK6 155 aa3.4□□□□□ -1.87
HERC4-215ENST00000515753 A0A1B0GX30 115 aa3.4□□□□□ -1.87
HERC4-215ENST00000515753 FAM90A7PA6NKC0 464 aa3.4□□□□□ -1.87
HERC4-215ENST00000515753 BECN2A8MW95 431 aa3.4□□□□□ -1.87
HERC4-215ENST00000515753 FAM90A22PA8MWA6 464 aa3.4□□□□□ -1.87
HERC4-215ENST00000515753 FAM90A12PA8MX19 464 aa3.4□□□□□ -1.87
HERC4-215ENST00000515753 FAM90A23PA8MXZ1 464 aa3.4□□□□□ -1.87
HERC4-215ENST00000515753 INAFM1C9JVW0 142 aa3.4□□□□□ -1.87
HERC4-215ENST00000515753 VWA5AO00534 786 aa3.4□□□□□ -1.87
HERC4-215ENST00000515753 EBAG9O00559 213 aa3.4□□□□□ -1.87
HERC4-215ENST00000515753 TMCC2O75069 709 aa3.4□□□□□ -1.87
HERC4-215ENST00000515753 CAMTA2O94983 1202 aa3.4□□□□□ -1.87
HERC4-215ENST00000515753 SERPINC1P01008 464 aa3.4□□□□□ -1.87
HERC4-215ENST00000515753 CHRM4P08173 479 aa3.4□□□□□ -1.87
HERC4-215ENST00000515753 ACAA1P09110 424 aaPredicted RBP3.4□□□□□ -1.87
HERC4-215ENST00000515753 MLH1P40692 756 aa3.4□□□□□ -1.87
HERC4-215ENST00000515753 DPP6P42658 865 aa3.4□□□□□ -1.87
HERC4-215ENST00000515753 RFX5P48382 616 aaPredicted RBP3.4□□□□□ -1.87
HERC4-215ENST00000515753 PPP3CCP48454 512 aa3.4□□□□□ -1.87
HERC4-215ENST00000515753 CDH12P55289 794 aa3.4□□□□□ -1.87
HERC4-215ENST00000515753 ADAMTS12P58397 1594 aa3.4□□□□□ -1.87
HERC4-215ENST00000515753 ADORA2A-AS1P86434 159 aa3.4□□□□□ -1.87
HERC4-215ENST00000515753 TBL3Q12788 808 aaKnown RBP3.4□□□□□ -1.87
HERC4-215ENST00000515753 SHBQ15464 509 aa3.4□□□□□ -1.87
HERC4-215ENST00000515753 AP5B1Q2VPB7 878 aa3.4□□□□□ -1.87
HERC4-215ENST00000515753 ZNF284Q2VY69 593 aa3.4□□□□□ -1.87
HERC4-215ENST00000515753 WDR45BQ5MNZ6 344 aa3.4□□□□□ -1.87
HERC4-215ENST00000515753 C9orf50Q5SZB4 431 aa3.4□□□□□ -1.87
HERC4-215ENST00000515753 ITPRIPL1Q6GPH6 555 aa3.4□□□□□ -1.87
HERC4-215ENST00000515753 Q6ZSV7 163 aa3.4□□□□□ -1.87
HERC4-215ENST00000515753 Q6ZTK2 550 aa3.4□□□□□ -1.87
HERC4-215ENST00000515753 ZNF329Q86UD4 541 aa3.4□□□□□ -1.87
HERC4-215ENST00000515753 OR8H2Q8N162 312 aa3.4□□□□□ -1.87
HERC4-215ENST00000515753 MCPH1Q8NEM0 835 aa3.4□□□□□ -1.87
HERC4-215ENST00000515753 RAB40AQ8WXH6 277 aa3.4□□□□□ -1.87
HERC4-215ENST00000515753 RFFLQ8WZ73 363 aa3.4□□□□□ -1.87
HERC4-215ENST00000515753 HTRA1Q92743 480 aa3.4□□□□□ -1.87
HERC4-215ENST00000515753 MAELQ96JY0 434 aaKnown RBP3.4□□□□□ -1.87
HERC4-215ENST00000515753 C7orf26Q96N11 449 aa3.4□□□□□ -1.87
HERC4-215ENST00000515753 NUDT16L1Q9BRJ7 211 aaKnown RBP3.4□□□□□ -1.87
HERC4-215ENST00000515753 UACAQ9BZF9 1416 aa3.4□□□□□ -1.87
HERC4-215ENST00000515753 PLEKHA5Q9HAU0 1116 aa3.4□□□□□ -1.87
HERC4-215ENST00000515753 IRAK4Q9NWZ3 460 aa3.4□□□□□ -1.87
HERC4-215ENST00000515753 SUFUQ9UMX1 484 aa3.4□□□□□ -1.87
HERC4-215ENST00000515753 TOP2BQ02880 1626 aa3.4□□□□□ -1.87
HERC4-215ENST00000515753 UHRF1BP1LA0JNW5 1464 aa3.4□□□□□ -1.87
HERC4-215ENST00000515753 ABCC2Q92887 1545 aa3.39□□□□□ -1.87
HERC4-215ENST00000515753 FAM157AC9JC47 383 aa3.39□□□□□ -1.87
HERC4-215ENST00000515753 TBX18O95935 607 aa3.39□□□□□ -1.87
HERC4-215ENST00000515753 ADAP00813 363 aa3.39□□□□□ -1.87
HERC4-215ENST00000515753 CTPS1P17812 591 aa3.39□□□□□ -1.87
HERC4-215ENST00000515753 RXRAP19793 462 aa3.39□□□□□ -1.87
HERC4-215ENST00000515753 BLKP51451 505 aa3.39□□□□□ -1.87
HERC4-215ENST00000515753 RRP1P56182 461 aaKnown RBP3.39□□□□□ -1.87
HERC4-215ENST00000515753 DCAF7P61962 342 aa3.39□□□□□ -1.87
HERC4-215ENST00000515753 ABATP80404 500 aa3.39□□□□□ -1.87
HERC4-215ENST00000515753 UBE3AQ05086 875 aa3.39□□□□□ -1.87
HERC4-215ENST00000515753 SLC18A2Q05940 514 aa3.39□□□□□ -1.87
HERC4-215ENST00000515753 CRYZQ08257 329 aaKnown RBP3.39□□□□□ -1.87
HERC4-215ENST00000515753 DSC1Q08554 894 aa3.39□□□□□ -1.87
HERC4-215ENST00000515753 ST3GAL1Q11201 340 aa3.39□□□□□ -1.87
HERC4-215ENST00000515753 KEAP1Q14145 624 aa3.39□□□□□ -1.87
HERC4-215ENST00000515753 ME3Q16798 604 aa3.39□□□□□ -1.87
HERC4-215ENST00000515753 SH2D4BQ5SQS7 431 aa3.39□□□□□ -1.87
HERC4-215ENST00000515753 TRILQ7L0X0 811 aa3.39□□□□□ -1.87
HERC4-215ENST00000515753 HEATR4Q86WZ0 1026 aa3.39□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms