RNA–Protein interactions for RNA: ENST00000514267.1

CALCOCO2-223, Transcript of calcium binding and coiled-coil domain 2, human

TSL 2

Gene CALCOCO2, Length 336 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CALCOCO2-223	ENST00000514267	ATP8A2	Q9NTI2	1148 aa		3.6	□□□□□ -1.83
CALCOCO2-223	ENST00000514267	ARL8B	Q9NVJ2	186 aa		3.6	□□□□□ -1.83
CALCOCO2-223	ENST00000514267	SUCLA2	Q9P2R7	463 aa	Predicted RBP	3.6	□□□□□ -1.83
CALCOCO2-223	ENST00000514267	GIMAP2	Q9UG22	337 aa		3.6	□□□□□ -1.83
CALCOCO2-223	ENST00000514267	HAO1	Q9UJM8	370 aa		3.6	□□□□□ -1.83
CALCOCO2-223	ENST00000514267	INTS6	Q9UL03	887 aa	Known RBP	3.6	□□□□□ -1.83
CALCOCO2-223	ENST00000514267	ADAM18	Q9Y3Q7	739 aa		3.6	□□□□□ -1.83
CALCOCO2-223	ENST00000514267	SESN1	Q9Y6P5	492 aa		3.6	□□□□□ -1.83
CALCOCO2-223	ENST00000514267		A0A1W2PQF6	199 aa		3.59	□□□□□ -1.83
CALCOCO2-223	ENST00000514267	USP17L23	D6RBM5	183 aa		3.59	□□□□□ -1.83
CALCOCO2-223	ENST00000514267	SH2B2	O14492	632 aa	Predicted RBP	3.59	□□□□□ -1.83
CALCOCO2-223	ENST00000514267	HNRNPCL1	O60812	293 aa	Known RBP	3.59	□□□□□ -1.83
CALCOCO2-223	ENST00000514267	DDAH2	O95865	285 aa		3.59	□□□□□ -1.83
CALCOCO2-223	ENST00000514267	LCK	P06239	509 aa		3.59	□□□□□ -1.83
CALCOCO2-223	ENST00000514267	PTPN2	P17706	415 aa		3.59	□□□□□ -1.83
CALCOCO2-223	ENST00000514267	HOXA13	P31271	388 aa	Predicted RBP	3.59	□□□□□ -1.83
CALCOCO2-223	ENST00000514267	IDUA	P35475	653 aa		3.59	□□□□□ -1.83
CALCOCO2-223	ENST00000514267	SOX2	P48431	317 aa		3.59	□□□□□ -1.83
CALCOCO2-223	ENST00000514267	SLC14A1	Q13336	389 aa		3.59	□□□□□ -1.83
CALCOCO2-223	ENST00000514267	OLIG2	Q13516	323 aa		3.59	□□□□□ -1.83
CALCOCO2-223	ENST00000514267	RASA2	Q15283	850 aa		3.59	□□□□□ -1.83
CALCOCO2-223	ENST00000514267	TAF11	Q15544	211 aa		3.59	□□□□□ -1.83
CALCOCO2-223	ENST00000514267	NTRK2	Q16620	822 aa		3.59	□□□□□ -1.83
CALCOCO2-223	ENST00000514267	FAM171A1	Q5VUB5	890 aa		3.59	□□□□□ -1.83
CALCOCO2-223	ENST00000514267	RPUSD3	Q6P087	351 aa	Known RBP	3.59	□□□□□ -1.83
CALCOCO2-223	ENST00000514267	DHRS13	Q6UX07	377 aa		3.59	□□□□□ -1.83
CALCOCO2-223	ENST00000514267	CHST9	Q7L1S5	443 aa		3.59	□□□□□ -1.83
CALCOCO2-223	ENST00000514267	RHPN2	Q8IUC4	686 aa		3.59	□□□□□ -1.83
CALCOCO2-223	ENST00000514267	SUGP2	Q8IX01	1082 aa	Known RBP eCLIP	3.59	□□□□□ -1.83
CALCOCO2-223	ENST00000514267	KAT2B	Q92831	832 aa		3.59	□□□□□ -1.83
CALCOCO2-223	ENST00000514267	MAP4K1	Q92918	833 aa		3.59	□□□□□ -1.83
CALCOCO2-223	ENST00000514267	RADIL	Q96JH8	1075 aa		3.59	□□□□□ -1.83
CALCOCO2-223	ENST00000514267	CNDP2	Q96KP4	475 aa	Known RBP	3.59	□□□□□ -1.83
CALCOCO2-223	ENST00000514267	NCAPG	Q9BPX3	1015 aa		3.59	□□□□□ -1.83
CALCOCO2-223	ENST00000514267	ZCCHC17	Q9NP64	241 aa	Known RBP	3.59	□□□□□ -1.83
CALCOCO2-223	ENST00000514267	ASAH2	Q9NR71	780 aa		3.59	□□□□□ -1.83
CALCOCO2-223	ENST00000514267	GIMAP4	Q9NUV9	329 aa		3.59	□□□□□ -1.83
CALCOCO2-223	ENST00000514267	POT1	Q9NUX5	634 aa		3.59	□□□□□ -1.83
CALCOCO2-223	ENST00000514267	DLGAP2	Q9P1A6	1054 aa		3.59	□□□□□ -1.83
CALCOCO2-223	ENST00000514267	MARCH4	Q9P2E8	410 aa	Predicted RBP	3.59	□□□□□ -1.83
CALCOCO2-223	ENST00000514267	KLHL13	Q9P2N7	655 aa		3.59	□□□□□ -1.83
CALCOCO2-223	ENST00000514267	ICK	Q9UPZ9	632 aa		3.59	□□□□□ -1.83
CALCOCO2-223	ENST00000514267	ZNF711	Q9Y462	761 aa		3.59	□□□□□ -1.83
CALCOCO2-223	ENST00000514267	PCDHGB5	Q9Y5G0	923 aa		3.59	□□□□□ -1.83
CALCOCO2-223	ENST00000514267	CAPN7	Q9Y6W3	813 aa		3.59	□□□□□ -1.83
CALCOCO2-223	ENST00000514267	UTY	O14607	1347 aa		3.59	□□□□□ -1.83
CALCOCO2-223	ENST00000514267	ARHGEF17	Q96PE2	2063 aa	Predicted RBP	3.58	□□□□□ -1.84
CALCOCO2-223	ENST00000514267		A0A1W2PQ09	198 aa		3.58	□□□□□ -1.84
CALCOCO2-223	ENST00000514267	KRTAP29-1	A8MX34	341 aa	Predicted RBP	3.58	□□□□□ -1.84
CALCOCO2-223	ENST00000514267	GJB3	O75712	270 aa		3.58	□□□□□ -1.84
CALCOCO2-223	ENST00000514267	IL1A	P01583	271 aa		3.58	□□□□□ -1.84
CALCOCO2-223	ENST00000514267	APOA4	P06727	396 aa		3.58	□□□□□ -1.84
CALCOCO2-223	ENST00000514267	SAT1	P21673	171 aa		3.58	□□□□□ -1.84
CALCOCO2-223	ENST00000514267	TBXAS1	P24557	533 aa	Predicted RBP	3.58	□□□□□ -1.84
CALCOCO2-223	ENST00000514267	MCM3	P25205	808 aa		3.58	□□□□□ -1.84
CALCOCO2-223	ENST00000514267	YWHAQ	P27348	245 aa		3.58	□□□□□ -1.84
CALCOCO2-223	ENST00000514267	CHRNA5	P30532	468 aa		3.58	□□□□□ -1.84
CALCOCO2-223	ENST00000514267	GCH1	P30793	250 aa		3.58	□□□□□ -1.84
CALCOCO2-223	ENST00000514267	CDA	P32320	146 aa		3.58	□□□□□ -1.84
CALCOCO2-223	ENST00000514267	LMAN1	P49257	510 aa		3.58	□□□□□ -1.84
CALCOCO2-223	ENST00000514267	CYP2J2	P51589	502 aa		3.58	□□□□□ -1.84
CALCOCO2-223	ENST00000514267	ARSF	P54793	590 aa		3.58	□□□□□ -1.84
CALCOCO2-223	ENST00000514267	ZBTB16	Q05516	673 aa		3.58	□□□□□ -1.84
CALCOCO2-223	ENST00000514267	IRF3	Q14653	427 aa		3.58	□□□□□ -1.84
CALCOCO2-223	ENST00000514267	KPNB1	Q14974	876 aa	Known RBP	3.58	□□□□□ -1.84
CALCOCO2-223	ENST00000514267	RABEP1	Q15276	862 aa		3.58	□□□□□ -1.84
CALCOCO2-223	ENST00000514267	RNPS1	Q15287	305 aa	Known RBP	3.58	□□□□□ -1.84
CALCOCO2-223	ENST00000514267	SHB	Q15464	509 aa		3.58	□□□□□ -1.84
CALCOCO2-223	ENST00000514267		Q4G0T1	1027 aa		3.58	□□□□□ -1.84
CALCOCO2-223	ENST00000514267	FBXO43	Q4G163	708 aa		3.58	□□□□□ -1.84
CALCOCO2-223	ENST00000514267	GARNL3	Q5VVW2	1013 aa		3.58	□□□□□ -1.84
CALCOCO2-223	ENST00000514267	ARMC3	Q5W041	872 aa		3.58	□□□□□ -1.84
CALCOCO2-223	ENST00000514267	JADE1	Q6IE81	842 aa		3.58	□□□□□ -1.84
CALCOCO2-223	ENST00000514267	RBM44	Q6ZP01	1051 aa	Known RBP	3.58	□□□□□ -1.84
CALCOCO2-223	ENST00000514267	ARFGAP1	Q8N6T3	406 aa		3.58	□□□□□ -1.84
CALCOCO2-223	ENST00000514267	FAR1	Q8WVX9	515 aa		3.58	□□□□□ -1.84
CALCOCO2-223	ENST00000514267	PSPC1	Q8WXF1	523 aa	Known RBP	3.58	□□□□□ -1.84
CALCOCO2-223	ENST00000514267	GTF3C6	Q969F1	213 aa		3.58	□□□□□ -1.84
CALCOCO2-223	ENST00000514267	C1orf74	Q96LT6	269 aa		3.58	□□□□□ -1.84
CALCOCO2-223	ENST00000514267	MRPL1	Q9BYD6	325 aa	Known RBP	3.58	□□□□□ -1.84
CALCOCO2-223	ENST00000514267	SLC35C2	Q9NQQ7	365 aa		3.58	□□□□□ -1.84
CALCOCO2-223	ENST00000514267	RRP7BP	Q9NSQ0	103 aa		3.58	□□□□□ -1.84
CALCOCO2-223	ENST00000514267	MTPAP	Q9NVV4	582 aa	Known RBP eCLIP	3.58	□□□□□ -1.84
CALCOCO2-223	ENST00000514267	MRPL15	Q9P015	296 aa	Known RBP	3.58	□□□□□ -1.84
CALCOCO2-223	ENST00000514267	ZNF644	Q9H582	1327 aa	Predicted RBP	3.58	□□□□□ -1.84
CALCOCO2-223	ENST00000514267	MST1R	Q04912	1400 aa		3.58	□□□□□ -1.84
CALCOCO2-223	ENST00000514267	SMARCA4	P51532	1647 aa		3.58	□□□□□ -1.84
CALCOCO2-223	ENST00000514267	UNC13A	Q9UPW8	1703 aa		3.58	□□□□□ -1.84
CALCOCO2-223	ENST00000514267	TCRBV7S3A2	A0A539	114 aa		3.57	□□□□□ -1.84
CALCOCO2-223	ENST00000514267	CBY3	A6NI87	242 aa		3.57	□□□□□ -1.84
CALCOCO2-223	ENST00000514267	GLOD5	A6NK44	160 aa		3.57	□□□□□ -1.84
CALCOCO2-223	ENST00000514267	EBAG9	O00559	213 aa		3.57	□□□□□ -1.84
CALCOCO2-223	ENST00000514267	UBE2C	O00762	179 aa		3.57	□□□□□ -1.84
CALCOCO2-223	ENST00000514267	INPPL1	O15357	1258 aa		3.57	□□□□□ -1.84
CALCOCO2-223	ENST00000514267	MSI1	O43347	362 aa	Known RBP	3.57	□□□□□ -1.84
CALCOCO2-223	ENST00000514267	HCRTR2	O43614	444 aa		3.57	□□□□□ -1.84
CALCOCO2-223	ENST00000514267	LIAS	O43766	372 aa		3.57	□□□□□ -1.84
CALCOCO2-223	ENST00000514267	NDUFS3	O75489	264 aa		3.57	□□□□□ -1.84
CALCOCO2-223	ENST00000514267	SEC31A	O94979	1220 aa	Known RBP	3.57	□□□□□ -1.84
CALCOCO2-223	ENST00000514267	CBX6	O95503	412 aa		3.57	□□□□□ -1.84

Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms