RNA–Protein interactions for RNA: ENST00000513562.1

DDX41-216, Transcript of DEAD-box helicase 41, humanhuman

TSL 4

Gene DDX41, Length 552 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-216ENST00000513562 ERBB2P04626 1255 aa11.06□□□□□ -0.64
DDX41-216ENST00000513562 TFE3P19532 575 aaPredicted RBP11.06□□□□□ -0.64
DDX41-216ENST00000513562 UGT1A3P35503 534 aa11.06□□□□□ -0.64
DDX41-216ENST00000513562 B4GALNT1Q00973 533 aa11.06□□□□□ -0.64
DDX41-216ENST00000513562 SLC6A3Q01959 620 aa11.06□□□□□ -0.64
DDX41-216ENST00000513562 LRRC14Q15048 493 aa11.06□□□□□ -0.64
DDX41-216ENST00000513562 WSCD2Q2TBF2 565 aa11.06□□□□□ -0.64
DDX41-216ENST00000513562 ZNF658Q5TYW1 1059 aaPredicted RBP11.06□□□□□ -0.64
DDX41-216ENST00000513562 KCTD16Q68DU8 428 aa11.06□□□□□ -0.64
DDX41-216ENST00000513562 RD3Q7Z3Z2 195 aa11.06□□□□□ -0.64
DDX41-216ENST00000513562 TTC7BQ86TV6 843 aa11.06□□□□□ -0.64
DDX41-216ENST00000513562 SFTPA2Q8IWL1 248 aa11.06□□□□□ -0.64
DDX41-216ENST00000513562 IL22RA1Q8N6P7 574 aa11.06□□□□□ -0.64
DDX41-216ENST00000513562 ATL2Q8NHH9 583 aa11.06□□□□□ -0.64
DDX41-216ENST00000513562 NT5C3BQ969T7 300 aa11.06□□□□□ -0.64
DDX41-216ENST00000513562 PDXPQ96GD0 296 aa11.06□□□□□ -0.64
DDX41-216ENST00000513562 WDR92Q96MX6 357 aa11.06□□□□□ -0.64
DDX41-216ENST00000513562 TAAR9Q96RI9 348 aa11.06□□□□□ -0.64
DDX41-216ENST00000513562 GOLPH3LQ9H4A5 285 aa11.06□□□□□ -0.64
DDX41-216ENST00000513562 TMPRSS4Q9NRS4 437 aa11.06□□□□□ -0.64
DDX41-216ENST00000513562 KCNK4Q9NYG8 393 aa11.06□□□□□ -0.64
DDX41-216ENST00000513562 LRIT1Q9P2V4 623 aa11.06□□□□□ -0.64
DDX41-216ENST00000513562 PLEKHB1Q9UF11 243 aaPredicted RBP11.06□□□□□ -0.64
DDX41-216ENST00000513562 OR1A2Q9Y585 309 aa11.06□□□□□ -0.64
DDX41-216ENST00000513562 POP4O95707 220 aaKnown RBP11.05□□□□□ -0.64
DDX41-216ENST00000513562 TNFP01375 233 aa11.05□□□□□ -0.64
DDX41-216ENST00000513562 FGF3P11487 239 aaPredicted RBP11.05□□□□□ -0.64
DDX41-216ENST00000513562 ITIH2P19823 946 aa11.05□□□□□ -0.64
DDX41-216ENST00000513562 ACVRL1P37023 503 aa11.05□□□□□ -0.64
DDX41-216ENST00000513562 SULT1E1P49888 294 aa11.05□□□□□ -0.64
DDX41-216ENST00000513562 GEMIN4P57678 1058 aaKnown RBP11.05□□□□□ -0.64
DDX41-216ENST00000513562 SNRPD1P62314 119 aaKnown RBP11.05□□□□□ -0.64
DDX41-216ENST00000513562 ARHGEF7Q14155 803 aa11.05□□□□□ -0.64
DDX41-216ENST00000513562 INPP5AQ14642 412 aa11.05□□□□□ -0.64
DDX41-216ENST00000513562 POLD3Q15054 466 aaPredicted RBP11.05□□□□□ -0.64
DDX41-216ENST00000513562 CLPPQ16740 277 aaPredicted RBP11.05□□□□□ -0.64
DDX41-216ENST00000513562 MYLK3Q32MK0 819 aa11.05□□□□□ -0.64
DDX41-216ENST00000513562 CCDC40Q4G0X9 1142 aa11.05□□□□□ -0.64
DDX41-216ENST00000513562 GDPD4Q6W3E5 623 aa11.05□□□□□ -0.64
DDX41-216ENST00000513562 ZNF438Q7Z4V0 828 aa11.05□□□□□ -0.64
DDX41-216ENST00000513562 PIM3Q86V86 326 aa11.05□□□□□ -0.64
DDX41-216ENST00000513562 ATCAYQ86WG3 371 aa11.05□□□□□ -0.64
DDX41-216ENST00000513562 PASD1Q8IV76 773 aa11.05□□□□□ -0.64
DDX41-216ENST00000513562 CACNA2D3Q8IZS8 1091 aa11.05□□□□□ -0.64
DDX41-216ENST00000513562 FAM46DQ8NEK8 389 aa11.05□□□□□ -0.64
DDX41-216ENST00000513562 ABHD17AQ96GS6 310 aa11.05□□□□□ -0.64
DDX41-216ENST00000513562 SLC45A3Q96JT2 553 aa11.05□□□□□ -0.64
DDX41-216ENST00000513562 SPATA32Q96LK8 384 aa11.05□□□□□ -0.64
DDX41-216ENST00000513562 CEP63Q96MT8 703 aa11.05□□□□□ -0.64
DDX41-216ENST00000513562 WRAP53Q9BUR4 548 aaKnown RBP11.05□□□□□ -0.64
DDX41-216ENST00000513562 APOOQ9BUR5 198 aa11.05□□□□□ -0.64
DDX41-216ENST00000513562 GTPBP4Q9BZE4 634 aaKnown RBP11.05□□□□□ -0.64
DDX41-216ENST00000513562 ZYG11BQ9C0D3 744 aa11.05□□□□□ -0.64
DDX41-216ENST00000513562 INTS2Q9H0H0 1204 aaKnown RBP11.05□□□□□ -0.64
DDX41-216ENST00000513562 RDH14Q9HBH5 336 aa11.05□□□□□ -0.64
DDX41-216ENST00000513562 UBE2TQ9NPD8 197 aaPredicted RBP11.05□□□□□ -0.64
DDX41-216ENST00000513562 STAP1Q9ULZ2 295 aa11.05□□□□□ -0.64
DDX41-216ENST00000513562 PCDHGC3Q9UN70 934 aa11.05□□□□□ -0.64
DDX41-216ENST00000513562 SCN8AQ9UQD0 1980 aa11.05□□□□□ -0.64
DDX41-216ENST00000513562 TRPM6Q9BX84 2022 aa11.04□□□□□ -0.64
DDX41-216ENST00000513562 BECN2A8MW95 431 aa11.04□□□□□ -0.64
DDX41-216ENST00000513562 B4DGG1 531 aa11.04□□□□□ -0.64
DDX41-216ENST00000513562 CAPN5O15484 640 aaPredicted RBP11.04□□□□□ -0.64
DDX41-216ENST00000513562 MTSS1O43312 755 aa11.04□□□□□ -0.64
DDX41-216ENST00000513562 B4GAT1O43505 415 aa11.04□□□□□ -0.64
DDX41-216ENST00000513562 RAD1O60671 282 aa11.04□□□□□ -0.64
DDX41-216ENST00000513562 SRGAP2O75044 1071 aa11.04□□□□□ -0.64
DDX41-216ENST00000513562 ZNF202O95125 648 aa11.04□□□□□ -0.64
DDX41-216ENST00000513562 F9P00740 461 aa11.04□□□□□ -0.64
DDX41-216ENST00000513562 TIMP2P16035 220 aa11.04□□□□□ -0.64
DDX41-216ENST00000513562 ETFBP38117 255 aa11.04□□□□□ -0.64
DDX41-216ENST00000513562 DEUP1Q05D60 604 aa11.04□□□□□ -0.64
DDX41-216ENST00000513562 PNOCQ13519 176 aa11.04□□□□□ -0.64
DDX41-216ENST00000513562 NR1D2Q14995 579 aa11.04□□□□□ -0.64
DDX41-216ENST00000513562 AGERQ15109 404 aa11.04□□□□□ -0.64
DDX41-216ENST00000513562 ARHGAP44Q17R89 818 aa11.04□□□□□ -0.64
DDX41-216ENST00000513562 PTPN20Q4JDL3 420 aa11.04□□□□□ -0.64
DDX41-216ENST00000513562 TMEM52BQ4KMG9 183 aa11.04□□□□□ -0.64
DDX41-216ENST00000513562 LACTB2Q53H82 288 aaPredicted RBP11.04□□□□□ -0.64
DDX41-216ENST00000513562 SPECC1LQ69YQ0 1117 aa11.04□□□□□ -0.64
DDX41-216ENST00000513562 ENOSF1Q7L5Y1 443 aa11.04□□□□□ -0.64
DDX41-216ENST00000513562 TAF8Q7Z7C8 310 aa11.04□□□□□ -0.64
DDX41-216ENST00000513562 IRF2BP1Q8IU81 584 aa11.04□□□□□ -0.64
DDX41-216ENST00000513562 ZDHHC17Q8IUH5 632 aa11.04□□□□□ -0.64
DDX41-216ENST00000513562 DRC7Q8IY82 874 aa11.04□□□□□ -0.64
DDX41-216ENST00000513562 C1orf131Q8NDD1 294 aaKnown RBP11.04□□□□□ -0.64
DDX41-216ENST00000513562 RCBTB1Q8NDN9 531 aa11.04□□□□□ -0.64
DDX41-216ENST00000513562 SPATA20Q8TB22 786 aa11.04□□□□□ -0.64
DDX41-216ENST00000513562 OR1E3Q8WZA6 343 aa11.04□□□□□ -0.64
DDX41-216ENST00000513562 HAPLN3Q96S86 360 aa11.04□□□□□ -0.64
DDX41-216ENST00000513562 NUDT22Q9BRQ3 303 aa11.04□□□□□ -0.64
DDX41-216ENST00000513562 DDA1Q9BW61 102 aa11.04□□□□□ -0.64
DDX41-216ENST00000513562 FGF22Q9HCT0 170 aa11.04□□□□□ -0.64
DDX41-216ENST00000513562 TMEM51Q9NW97 253 aa11.04□□□□□ -0.64
DDX41-216ENST00000513562 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.04□□□□□ -0.64
DDX41-216ENST00000513562 PPARGC1AQ9UBK2 798 aaKnown RBP11.04□□□□□ -0.64
DDX41-216ENST00000513562 DKK3Q9UBP4 350 aa11.04□□□□□ -0.64
DDX41-216ENST00000513562 COQ6Q9Y2Z9 468 aa11.04□□□□□ -0.64
DDX41-216ENST00000513562 B3GALT1Q9Y5Z6 326 aa11.04□□□□□ -0.64
DDX41-216ENST00000513562 IGHV5-10-1A0A0J9YXX1 117 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms