RNA–Protein interactions for RNA: ENST00000512590.6

VCAN-208, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 5,923 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-208ENST00000512590 DCST1Q5T197 706 aa8.99□□□□□ -0.97
VCAN-208ENST00000512590 UNC5BQ8IZJ1 945 aa8.99□□□□□ -0.97
VCAN-208ENST00000512590 METTL6Q8TCB7 284 aa8.99□□□□□ -0.97
VCAN-208ENST00000512590 FAM172AQ8WUF8 416 aa8.99□□□□□ -0.97
VCAN-208ENST00000512590 FAM111AQ96PZ2 611 aa8.99□□□□□ -0.97
VCAN-208ENST00000512590 MTMR12Q9C0I1 747 aa8.99□□□□□ -0.97
VCAN-208ENST00000512590 EPB41L1Q9H4G0 881 aa8.99□□□□□ -0.97
VCAN-208ENST00000512590 METTL7AQ9H8H3 244 aa8.99□□□□□ -0.97
VCAN-208ENST00000512590 TMEM8AQ9HCN3 771 aa8.99□□□□□ -0.97
VCAN-208ENST00000512590 ABCC13Q9NSE7 274 aa8.99□□□□□ -0.97
VCAN-208ENST00000512590 SLC27A5Q9Y2P5 690 aa8.99□□□□□ -0.97
VCAN-208ENST00000512590 VEGFDO43915 354 aa8.99□□□□□ -0.97
VCAN-208ENST00000512590 CST8O60676 142 aa8.99□□□□□ -0.97
VCAN-208ENST00000512590 BAIAP3O94812 1187 aa8.99□□□□□ -0.97
VCAN-208ENST00000512590 NAMPTP43490 491 aa8.99□□□□□ -0.97
VCAN-208ENST00000512590 MMP13P45452 471 aa8.99□□□□□ -0.97
VCAN-208ENST00000512590 TAS2R41P59536 307 aa8.99□□□□□ -0.97
VCAN-208ENST00000512590 FCHO2Q0JRZ9 810 aa8.99□□□□□ -0.97
VCAN-208ENST00000512590 FRMD5Q7Z6J6 570 aa8.99□□□□□ -0.97
VCAN-208ENST00000512590 ZNF410Q86VK4 478 aa8.99□□□□□ -0.97
VCAN-208ENST00000512590 ULK2Q8IYT8 1036 aa8.99□□□□□ -0.97
VCAN-208ENST00000512590 C11orf65Q8NCR3 313 aa8.99□□□□□ -0.97
VCAN-208ENST00000512590 TOP1MTQ969P6 601 aa8.99□□□□□ -0.97
VCAN-208ENST00000512590 PRR11Q96HE9 360 aaPredicted RBP8.99□□□□□ -0.97
VCAN-208ENST00000512590 IRF2BPLQ9H1B7 796 aa8.99□□□□□ -0.97
VCAN-208ENST00000512590 PRDM8Q9NQV8 689 aa8.99□□□□□ -0.97
VCAN-208ENST00000512590 SLC2A4RGQ9NR83 387 aa8.99□□□□□ -0.97
VCAN-208ENST00000512590 KCNH7Q9NS40 1196 aa8.99□□□□□ -0.97
VCAN-208ENST00000512590 ANKRD6Q9Y2G4 727 aa8.99□□□□□ -0.97
VCAN-208ENST00000512590 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP8.99□□□□□ -0.97
VCAN-208ENST00000512590 NT5C1B-RDH14C9J2C7 533 aa8.99□□□□□ -0.97
VCAN-208ENST00000512590 LDB2O43679 373 aa8.99□□□□□ -0.97
VCAN-208ENST00000512590 TFE3P19532 575 aaPredicted RBP8.99□□□□□ -0.97
VCAN-208ENST00000512590 CCNA2P20248 432 aa8.99□□□□□ -0.97
VCAN-208ENST00000512590 SNRPFP62306 86 aaKnown RBP8.99□□□□□ -0.97
VCAN-208ENST00000512590 INTS11Q5TA45 600 aaKnown RBP8.99□□□□□ -0.97
VCAN-208ENST00000512590 MROH9Q5TGP6 573 aa8.99□□□□□ -0.97
VCAN-208ENST00000512590 SMIM5Q71RC9 77 aa8.99□□□□□ -0.97
VCAN-208ENST00000512590 ADGRG6Q86SQ4 1221 aa8.99□□□□□ -0.97
VCAN-208ENST00000512590 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.99□□□□□ -0.97
VCAN-208ENST00000512590 ZCCHC10Q8TBK6 192 aa8.99□□□□□ -0.97
VCAN-208ENST00000512590 KLHL4Q9C0H6 718 aa8.99□□□□□ -0.97
VCAN-208ENST00000512590 POLR1EQ9GZS1 481 aaKnown RBP8.99□□□□□ -0.97
VCAN-208ENST00000512590 PDE11AQ9HCR9 933 aa8.99□□□□□ -0.97
VCAN-208ENST00000512590 SALL3Q9BXA9 1300 aa8.98□□□□□ -0.97
VCAN-208ENST00000512590 BTN3A1O00481 513 aa8.98□□□□□ -0.97
VCAN-208ENST00000512590 AREL1O15033 823 aa8.98□□□□□ -0.97
VCAN-208ENST00000512590 ABCB7O75027 752 aa8.98□□□□□ -0.97
VCAN-208ENST00000512590 GABBR2O75899 941 aa8.98□□□□□ -0.97
VCAN-208ENST00000512590 PRLRP16471 622 aa8.98□□□□□ -0.97
VCAN-208ENST00000512590 FKBP1BP68106 108 aa8.98□□□□□ -0.97
VCAN-208ENST00000512590 TLR1Q15399 786 aa8.98□□□□□ -0.97
VCAN-208ENST00000512590 XKR6Q5GH73 641 aa8.98□□□□□ -0.97
VCAN-208ENST00000512590 BEND4Q6ZU67 534 aa8.98□□□□□ -0.97
VCAN-208ENST00000512590 C17orf64Q86WR6 236 aa8.98□□□□□ -0.97
VCAN-208ENST00000512590 RIOX2Q8IUF8 465 aa8.98□□□□□ -0.97
VCAN-208ENST00000512590 OR2L8Q8NGY9 312 aa8.98□□□□□ -0.97
VCAN-208ENST00000512590 AP2M1Q96CW1 435 aa8.98□□□□□ -0.97
VCAN-208ENST00000512590 CCNL2Q96S94 520 aaPredicted RBP8.98□□□□□ -0.97
VCAN-208ENST00000512590 ILKAPQ9H0C8 392 aaPredicted RBP8.98□□□□□ -0.97
VCAN-208ENST00000512590 EQTNQ9NQ60 294 aa8.98□□□□□ -0.97
VCAN-208ENST00000512590 OSER1Q9NX31 292 aa8.98□□□□□ -0.97
VCAN-208ENST00000512590 PTGFRNQ9P2B2 879 aa8.98□□□□□ -0.97
VCAN-208ENST00000512590 UPB1Q9UBR1 384 aa8.98□□□□□ -0.97
VCAN-208ENST00000512590 KLQ9UEF7 1012 aa8.98□□□□□ -0.97
VCAN-208ENST00000512590 GTF3C4Q9UKN8 822 aa8.98□□□□□ -0.97
VCAN-208ENST00000512590 L1RE1Q9UN81 338 aa8.98□□□□□ -0.97
VCAN-208ENST00000512590 ADGRL3Q9HAR2 1447 aa8.98□□□□□ -0.97
VCAN-208ENST00000512590 A8MUA0 341 aa8.98□□□□□ -0.97
VCAN-208ENST00000512590 LIN7AO14910 233 aaPredicted RBP8.98□□□□□ -0.97
VCAN-208ENST00000512590 ABOP16442 354 aa8.98□□□□□ -0.97
VCAN-208ENST00000512590 IL5RAQ01344 420 aa8.98□□□□□ -0.97
VCAN-208ENST00000512590 MBTD1Q05BQ5 628 aa8.98□□□□□ -0.97
VCAN-208ENST00000512590 LSM12Q3MHD2 195 aaKnown RBP8.98□□□□□ -0.97
VCAN-208ENST00000512590 UNQ6126/PRO20091Q6UXV3 157 aa8.98□□□□□ -0.97
VCAN-208ENST00000512590 BEND5Q7L4P6 421 aa8.98□□□□□ -0.97
VCAN-208ENST00000512590 FAM131BQ86XD5 332 aa8.98□□□□□ -0.97
VCAN-208ENST00000512590 FNDC5Q8NAU1 212 aa8.98□□□□□ -0.97
VCAN-208ENST00000512590 ADAMTS15Q8TE58 950 aa8.98□□□□□ -0.97
VCAN-208ENST00000512590 TRIM51Q9BSJ1 452 aa8.98□□□□□ -0.97
VCAN-208ENST00000512590 FNDC11Q9BVV2 318 aa8.98□□□□□ -0.97
VCAN-208ENST00000512590 ADAM33Q9BZ11 813 aa8.98□□□□□ -0.97
VCAN-208ENST00000512590 LRFN1Q9P244 771 aa8.98□□□□□ -0.97
VCAN-208ENST00000512590 HEY2Q9UBP5 337 aa8.98□□□□□ -0.97
VCAN-208ENST00000512590 REV1Q9UBZ9 1251 aa8.98□□□□□ -0.97
VCAN-208ENST00000512590 MDFIC2A0A1B0GVS7 189 aa8.98□□□□□ -0.97
VCAN-208ENST00000512590 SH3D21A4FU49 640 aa8.98□□□□□ -0.97
VCAN-208ENST00000512590 FAM187AA6NFU0 413 aa8.98□□□□□ -0.97
VCAN-208ENST00000512590 SLC35G6P0C7Q6 338 aa8.98□□□□□ -0.97
VCAN-208ENST00000512590 AHCYP23526 432 aa8.98□□□□□ -0.97
VCAN-208ENST00000512590 S100A3P33764 101 aa8.98□□□□□ -0.97
VCAN-208ENST00000512590 ILF2Q12905 390 aaKnown RBP8.98□□□□□ -0.97
VCAN-208ENST00000512590 SLC9B1Q4ZJI4 515 aa8.98□□□□□ -0.97
VCAN-208ENST00000512590 EIF3MQ7L2H7 374 aaKnown RBP8.98□□□□□ -0.97
VCAN-208ENST00000512590 TRAPPC11Q7Z392 1133 aa8.98□□□□□ -0.97
VCAN-208ENST00000512590 DNERQ8NFT8 737 aa8.98□□□□□ -0.97
VCAN-208ENST00000512590 MCMBPQ9BTE3 642 aa8.98□□□□□ -0.97
VCAN-208ENST00000512590 PTPRHQ9HD43 1115 aa8.98□□□□□ -0.97
VCAN-208ENST00000512590 CCNB1IP1Q9NPC3 277 aa8.98□□□□□ -0.97
VCAN-208ENST00000512590 UBAP1Q9NZ09 502 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms