RNA–Protein interactions for RNA: ENST00000512027.1

DDX41-213, Transcript of DEAD-box helicase 41, humanhuman

TSL 4

Gene DDX41, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-213ENST00000512027 A6NNZ2 444 aa16.64■□□□□ 0.25
DDX41-213ENST00000512027 MAGEC1O60732 1142 aa16.64■□□□□ 0.25
DDX41-213ENST00000512027 SERPINB6P35237 376 aa16.64■□□□□ 0.25
DDX41-213ENST00000512027 IGFALSP35858 605 aa16.64■□□□□ 0.25
DDX41-213ENST00000512027 OVGP1Q12889 678 aa16.64■□□□□ 0.25
DDX41-213ENST00000512027 UGP2Q16851 508 aa16.64■□□□□ 0.25
DDX41-213ENST00000512027 ANKRD20A8PQ5CZ79 823 aa16.64■□□□□ 0.25
DDX41-213ENST00000512027 FAM182AQ5T1J6 154 aa16.64■□□□□ 0.25
DDX41-213ENST00000512027 ZFYVE27Q5T4F4 411 aa16.64■□□□□ 0.25
DDX41-213ENST00000512027 CFAP58Q5T655 872 aa16.64■□□□□ 0.25
DDX41-213ENST00000512027 KANSL1Q7Z3B3 1105 aa16.64■□□□□ 0.25
DDX41-213ENST00000512027 GLRX5Q86SX6 157 aa16.64■□□□□ 0.25
DDX41-213ENST00000512027 RAPGEF5Q92565 580 aa16.64■□□□□ 0.25
DDX41-213ENST00000512027 PSKH2Q96QS6 385 aa16.64■□□□□ 0.25
DDX41-213ENST00000512027 ATP13A3Q9H7F0 1226 aa16.64■□□□□ 0.25
DDX41-213ENST00000512027 UCKL1Q9NWZ5 548 aa16.64■□□□□ 0.25
DDX41-213ENST00000512027 RCOR3Q9P2K3 495 aaPredicted RBP16.64■□□□□ 0.25
DDX41-213ENST00000512027 SEPT3Q9UH03 358 aa16.64■□□□□ 0.25
DDX41-213ENST00000512027 PLXNB3Q9ULL4 1909 aa16.63■□□□□ 0.25
DDX41-213ENST00000512027 TNNT1P13805 278 aa16.63■□□□□ 0.25
DDX41-213ENST00000512027 SERPINA4P29622 427 aa16.63■□□□□ 0.25
DDX41-213ENST00000512027 MAN1A1P33908 653 aa16.63■□□□□ 0.25
DDX41-213ENST00000512027 RXRGP48443 463 aa16.63■□□□□ 0.25
DDX41-213ENST00000512027 CSNK1DP48730 415 aa16.63■□□□□ 0.25
DDX41-213ENST00000512027 BCL2L1Q07817 233 aa16.63■□□□□ 0.25
DDX41-213ENST00000512027 DNAJC3Q13217 504 aa16.63■□□□□ 0.25
DDX41-213ENST00000512027 RFTN1Q14699 578 aaPredicted RBP16.63■□□□□ 0.25
DDX41-213ENST00000512027 TMEM52BQ4KMG9 183 aa16.63■□□□□ 0.25
DDX41-213ENST00000512027 KYAT3Q6YP21 454 aaKnown RBP16.63■□□□□ 0.25
DDX41-213ENST00000512027 OXR1Q8N573 874 aa16.63■□□□□ 0.25
DDX41-213ENST00000512027 PQLC3Q8N755 202 aa16.63■□□□□ 0.25
DDX41-213ENST00000512027 PAF1Q8N7H5 531 aa16.63■□□□□ 0.25
DDX41-213ENST00000512027 RFFLQ8WZ73 363 aa16.63■□□□□ 0.25
DDX41-213ENST00000512027 ZNF599Q96NL3 588 aa16.63■□□□□ 0.25
DDX41-213ENST00000512027 TUBGCP5Q96RT8 1024 aa16.63■□□□□ 0.25
DDX41-213ENST00000512027 CDC6Q99741 560 aa16.63■□□□□ 0.25
DDX41-213ENST00000512027 ZNF670Q9BS34 389 aa16.63■□□□□ 0.25
DDX41-213ENST00000512027 GOLPH3Q9H4A6 298 aa16.63■□□□□ 0.25
DDX41-213ENST00000512027 MBNL1Q9NR56 388 aaKnown RBP16.63■□□□□ 0.25
DDX41-213ENST00000512027 FTSJ1Q9UET6 329 aa16.63■□□□□ 0.25
DDX41-213ENST00000512027 HS3ST3A1Q9Y663 406 aa16.63■□□□□ 0.25
DDX41-213ENST00000512027 A8MX80 341 aa16.62■□□□□ 0.25
DDX41-213ENST00000512027 C1QTNF9BB2RNN3 333 aa16.62■□□□□ 0.25
DDX41-213ENST00000512027 RIOK3O14730 519 aaKnown RBP16.62■□□□□ 0.25
DDX41-213ENST00000512027 FPGTO14772 594 aa16.62■□□□□ 0.25
DDX41-213ENST00000512027 TM7SF2O76062 418 aa16.62■□□□□ 0.25
DDX41-213ENST00000512027 MTA2O94776 668 aa16.62■□□□□ 0.25
DDX41-213ENST00000512027 KRT7P08729 469 aa16.62■□□□□ 0.25
DDX41-213ENST00000512027 C1QTNF9P0C862 333 aa16.62■□□□□ 0.25
DDX41-213ENST00000512027 C6P13671 934 aa16.62■□□□□ 0.25
DDX41-213ENST00000512027 CR2P20023 1033 aa16.62■□□□□ 0.25
DDX41-213ENST00000512027 KDELR1P24390 212 aa16.62■□□□□ 0.25
DDX41-213ENST00000512027 MMP12P39900 470 aa16.62■□□□□ 0.25
DDX41-213ENST00000512027 GBE1Q04446 702 aa16.62■□□□□ 0.25
DDX41-213ENST00000512027 NSUN2Q08J23 767 aaKnown RBP eCLIP16.62■□□□□ 0.25
DDX41-213ENST00000512027 ELP6Q0PNE2 266 aa16.62■□□□□ 0.25
DDX41-213ENST00000512027 PDE1CQ14123 709 aaPredicted RBP16.62■□□□□ 0.25
DDX41-213ENST00000512027 FZD2Q14332 565 aa16.62■□□□□ 0.25
DDX41-213ENST00000512027 GRM3Q14832 879 aa16.62■□□□□ 0.25
DDX41-213ENST00000512027 PAFAH1B3Q15102 231 aaKnown RBP16.62■□□□□ 0.25
DDX41-213ENST00000512027 PDK2Q15119 407 aa16.62■□□□□ 0.25
DDX41-213ENST00000512027 INAVAQ3KP66 663 aa16.62■□□□□ 0.25
DDX41-213ENST00000512027 RAB44Q7Z6P3 723 aaPredicted RBP16.62■□□□□ 0.25
DDX41-213ENST00000512027 MARCH9Q86YJ5 346 aa16.62■□□□□ 0.25
DDX41-213ENST00000512027 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP16.62■□□□□ 0.25
DDX41-213ENST00000512027 TP53I13Q8NBR0 393 aaPredicted RBP16.62■□□□□ 0.25
DDX41-213ENST00000512027 ECHDC3Q96DC8 303 aa16.62■□□□□ 0.25
DDX41-213ENST00000512027 CNDP2Q96KP4 475 aaKnown RBP16.62■□□□□ 0.25
DDX41-213ENST00000512027 ZNF641Q96N77 438 aaPredicted RBP16.62■□□□□ 0.25
DDX41-213ENST00000512027 LENG8Q96PV6 779 aaPredicted RBP16.62■□□□□ 0.25
DDX41-213ENST00000512027 NT5MQ9NPB1 228 aa16.62■□□□□ 0.25
DDX41-213ENST00000512027 GPR27Q9NS67 375 aa16.62■□□□□ 0.25
DDX41-213ENST00000512027 APOBEC2Q9Y235 224 aaKnown RBP16.62■□□□□ 0.25
DDX41-213ENST00000512027 ATP8A1Q9Y2Q0 1164 aa16.62■□□□□ 0.25
DDX41-213ENST00000512027 PCDHGC4Q9Y5F7 938 aa16.62■□□□□ 0.25
DDX41-213ENST00000512027 LRP4O75096 1905 aa16.61■□□□□ 0.25
DDX41-213ENST00000512027 KMT2BQ9UMN6 2715 aaPredicted RBP16.61■□□□□ 0.25
DDX41-213ENST00000512027 LRRD1A4D1F6 860 aa16.61■□□□□ 0.25
DDX41-213ENST00000512027 TRAFD1O14545 582 aaPredicted RBP16.61■□□□□ 0.25
DDX41-213ENST00000512027 YKT6O15498 198 aa16.61■□□□□ 0.25
DDX41-213ENST00000512027 FFAR2O15552 330 aa16.61■□□□□ 0.25
DDX41-213ENST00000512027 TNFSF14O43557 240 aa16.61■□□□□ 0.25
DDX41-213ENST00000512027 MMP13P45452 471 aa16.61■□□□□ 0.25
DDX41-213ENST00000512027 LIG3P49916 1009 aa16.61■□□□□ 0.25
DDX41-213ENST00000512027 RENBPP51606 427 aa16.61■□□□□ 0.25
DDX41-213ENST00000512027 CLDN6P56747 220 aa16.61■□□□□ 0.25
DDX41-213ENST00000512027 AP1S1P61966 158 aa16.61■□□□□ 0.25
DDX41-213ENST00000512027 GALNT2Q10471 571 aa16.61■□□□□ 0.25
DDX41-213ENST00000512027 SLC10A2Q12908 348 aaPredicted RBP16.61■□□□□ 0.25
DDX41-213ENST00000512027 RALGDSQ12967 914 aa16.61■□□□□ 0.25
DDX41-213ENST00000512027 PTPRRQ15256 657 aa16.61■□□□□ 0.25
DDX41-213ENST00000512027 IRF4Q15306 451 aa16.61■□□□□ 0.25
DDX41-213ENST00000512027 BRAT1Q6PJG6 821 aa16.61■□□□□ 0.25
DDX41-213ENST00000512027 NYAP1Q6ZVC0 841 aa16.61■□□□□ 0.25
DDX41-213ENST00000512027 RHOT2Q8IXI1 618 aa16.61■□□□□ 0.25
DDX41-213ENST00000512027 SLC25A45Q8N413 288 aa16.61■□□□□ 0.25
DDX41-213ENST00000512027 DENND6BQ8NEG7 585 aa16.61■□□□□ 0.25
DDX41-213ENST00000512027 PDCD6IPQ8WUM4 868 aaKnown RBP16.61■□□□□ 0.25
DDX41-213ENST00000512027 ASB12Q8WXK4 309 aa16.61■□□□□ 0.25
DDX41-213ENST00000512027 ADAMTS14Q8WXS8 1223 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms