RNA–Protein interactions for RNA: ENST00000511001.2

CHFR-208, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 5

Gene CHFR, Length 892 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-208ENST00000511001 EIF2B5Q13144 721 aaKnown RBP12.17□□□□□ -0.46
CHFR-208ENST00000511001 SGCGQ13326 291 aa12.17□□□□□ -0.46
CHFR-208ENST00000511001 PIGHQ14442 188 aaPredicted RBP12.17□□□□□ -0.46
CHFR-208ENST00000511001 BOLA3Q53S33 107 aa12.17□□□□□ -0.46
CHFR-208ENST00000511001 ZNF542PQ5EBM4 170 aa12.17□□□□□ -0.46
CHFR-208ENST00000511001 CCDC122Q5T0U0 273 aa12.17□□□□□ -0.46
CHFR-208ENST00000511001 ALKBH5Q6P6C2 394 aaKnown RBP12.17□□□□□ -0.46
CHFR-208ENST00000511001 SRLQ86TD4 932 aa12.17□□□□□ -0.46
CHFR-208ENST00000511001 CPNE8Q86YQ8 564 aa12.17□□□□□ -0.46
CHFR-208ENST00000511001 GALNT15Q8N3T1 639 aa12.17□□□□□ -0.46
CHFR-208ENST00000511001 TP53I13Q8NBR0 393 aaPredicted RBP12.17□□□□□ -0.46
CHFR-208ENST00000511001 OR4C6Q8NH72 309 aa12.17□□□□□ -0.46
CHFR-208ENST00000511001 HCAR2Q8TDS4 363 aa12.17□□□□□ -0.46
CHFR-208ENST00000511001 NUP85Q9BW27 656 aa12.17□□□□□ -0.46
CHFR-208ENST00000511001 PCDH18Q9HCL0 1135 aa12.17□□□□□ -0.46
CHFR-208ENST00000511001 KLF15Q9UIH9 416 aa12.17□□□□□ -0.46
CHFR-208ENST00000511001 ANAPC7Q9UJX3 599 aa12.17□□□□□ -0.46
CHFR-208ENST00000511001 PNMA8BQ9ULN7 279 aaPredicted RBP12.17□□□□□ -0.46
CHFR-208ENST00000511001 ARHGEF17Q96PE2 2063 aaPredicted RBP12.16□□□□□ -0.46
CHFR-208ENST00000511001 H3BRJ5 948 aa12.16□□□□□ -0.46
CHFR-208ENST00000511001 DFFAO00273 331 aa12.16□□□□□ -0.46
CHFR-208ENST00000511001 FPGTO14772 594 aa12.16□□□□□ -0.46
CHFR-208ENST00000511001 PALMO75781 387 aa12.16□□□□□ -0.46
CHFR-208ENST00000511001 TM7SF2O76062 418 aa12.16□□□□□ -0.46
CHFR-208ENST00000511001 PEX11BO96011 259 aa12.16□□□□□ -0.46
CHFR-208ENST00000511001 CSF2P04141 144 aa12.16□□□□□ -0.46
CHFR-208ENST00000511001 CKMT2P17540 419 aa12.16□□□□□ -0.46
CHFR-208ENST00000511001 ACP1P24666 158 aa12.16□□□□□ -0.46
CHFR-208ENST00000511001 SUOXP51687 545 aa12.16□□□□□ -0.46
CHFR-208ENST00000511001 ZNF211Q13398 564 aaPredicted RBP12.16□□□□□ -0.46
CHFR-208ENST00000511001 GRM3Q14832 879 aa12.16□□□□□ -0.46
CHFR-208ENST00000511001 UGP2Q16851 508 aa12.16□□□□□ -0.46
CHFR-208ENST00000511001 VPS36Q86VN1 386 aa12.16□□□□□ -0.46
CHFR-208ENST00000511001 TMPRSS12Q86WS5 348 aa12.16□□□□□ -0.46
CHFR-208ENST00000511001 PROSER1Q86XN7 944 aa12.16□□□□□ -0.46
CHFR-208ENST00000511001 CAMK1DQ8IU85 385 aa12.16□□□□□ -0.46
CHFR-208ENST00000511001 LZTR1Q8N653 840 aa12.16□□□□□ -0.46
CHFR-208ENST00000511001 MDM1Q8TC05 714 aa12.16□□□□□ -0.46
CHFR-208ENST00000511001 CXorf40AQ8TE69 158 aa12.16□□□□□ -0.46
CHFR-208ENST00000511001 TEKT4Q8WW24 435 aa12.16□□□□□ -0.46
CHFR-208ENST00000511001 HSPH1Q92598 858 aa12.16□□□□□ -0.46
CHFR-208ENST00000511001 ECHDC3Q96DC8 303 aa12.16□□□□□ -0.46
CHFR-208ENST00000511001 CSPG4P5Q96PW8 444 aa12.16□□□□□ -0.46
CHFR-208ENST00000511001 TUBGCP5Q96RT8 1024 aa12.16□□□□□ -0.46
CHFR-208ENST00000511001 WRAP53Q9BUR4 548 aaKnown RBP12.16□□□□□ -0.46
CHFR-208ENST00000511001 ZWILCHQ9H900 591 aa12.16□□□□□ -0.46
CHFR-208ENST00000511001 SP110Q9HB58 689 aa12.16□□□□□ -0.46
CHFR-208ENST00000511001 PCDH12Q9NPG4 1184 aa12.16□□□□□ -0.46
CHFR-208ENST00000511001 MBNL1Q9NR56 388 aaKnown RBP12.16□□□□□ -0.46
CHFR-208ENST00000511001 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.16□□□□□ -0.46
CHFR-208ENST00000511001 DNAJC28Q9NX36 388 aa12.16□□□□□ -0.46
CHFR-208ENST00000511001 IP6K2Q9UHH9 426 aa12.16□□□□□ -0.46
CHFR-208ENST00000511001 IPO11Q9UI26 975 aaKnown RBP12.16□□□□□ -0.46
CHFR-208ENST00000511001 COQ6Q9Y2Z9 468 aa12.16□□□□□ -0.46
CHFR-208ENST00000511001 LY6G6EA0A0G2JKS1 128 aa12.15□□□□□ -0.46
CHFR-208ENST00000511001 TRABD2BA6NFA1 517 aa12.15□□□□□ -0.46
CHFR-208ENST00000511001 RIOK3O14730 519 aaKnown RBP12.15□□□□□ -0.46
CHFR-208ENST00000511001 FFAR2O15552 330 aa12.15□□□□□ -0.46
CHFR-208ENST00000511001 PRKCGP05129 697 aa12.15□□□□□ -0.46
CHFR-208ENST00000511001 NME1P15531 152 aaKnown RBP12.15□□□□□ -0.46
CHFR-208ENST00000511001 IL4RP24394 825 aa12.15□□□□□ -0.46
CHFR-208ENST00000511001 EIF4A3P38919 411 aaKnown RBP12.15□□□□□ -0.46
CHFR-208ENST00000511001 ARL4AP40617 200 aa12.15□□□□□ -0.46
CHFR-208ENST00000511001 ARSEP51690 589 aa12.15□□□□□ -0.46
CHFR-208ENST00000511001 HNRNPKP61978 463 aaKnown RBP eCLIP12.15□□□□□ -0.46
CHFR-208ENST00000511001 SEMG2Q02383 582 aa12.15□□□□□ -0.46
CHFR-208ENST00000511001 NSUN2Q08J23 767 aaKnown RBP eCLIP12.15□□□□□ -0.46
CHFR-208ENST00000511001 SLC10A7Q0GE19 358 aa12.15□□□□□ -0.46
CHFR-208ENST00000511001 ELP6Q0PNE2 266 aa12.15□□□□□ -0.46
CHFR-208ENST00000511001 RALGDSQ12967 914 aa12.15□□□□□ -0.46
CHFR-208ENST00000511001 MMRN1Q13201 1228 aa12.15□□□□□ -0.46
CHFR-208ENST00000511001 ILKQ13418 452 aa12.15□□□□□ -0.46
CHFR-208ENST00000511001 PDE1CQ14123 709 aaPredicted RBP12.15□□□□□ -0.46
CHFR-208ENST00000511001 RFTN1Q14699 578 aaPredicted RBP12.15□□□□□ -0.46
CHFR-208ENST00000511001 KIF26BQ2KJY2 2108 aa12.15□□□□□ -0.46
CHFR-208ENST00000511001 ASTE1Q2TB18 679 aaPredicted RBP12.15□□□□□ -0.46
CHFR-208ENST00000511001 SKOR2Q2VWA4 1001 aaPredicted RBP12.15□□□□□ -0.46
CHFR-208ENST00000511001 PARGQ86W56 976 aa12.15□□□□□ -0.46
CHFR-208ENST00000511001 FAM71BQ8TC56 605 aa12.15□□□□□ -0.46
CHFR-208ENST00000511001 ZNF641Q96N77 438 aaPredicted RBP12.15□□□□□ -0.46
CHFR-208ENST00000511001 CINPQ9BW66 212 aaPredicted RBP12.15□□□□□ -0.46
CHFR-208ENST00000511001 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.15□□□□□ -0.46
CHFR-208ENST00000511001 U3KQA8 63 aa12.15□□□□□ -0.46
CHFR-208ENST00000511001 FREM2Q5SZK8 3169 aa12.14□□□□□ -0.47
CHFR-208ENST00000511001 TTC24A2A3L6 582 aaPredicted RBP12.14□□□□□ -0.47
CHFR-208ENST00000511001 K7ESM1 405 aa12.14□□□□□ -0.47
CHFR-208ENST00000511001 TRAFD1O14545 582 aaPredicted RBP12.14□□□□□ -0.47
CHFR-208ENST00000511001 SCAMP1O15126 338 aa12.14□□□□□ -0.47
CHFR-208ENST00000511001 NEBLO76041 1014 aa12.14□□□□□ -0.47
CHFR-208ENST00000511001 CD48P09326 243 aa12.14□□□□□ -0.47
CHFR-208ENST00000511001 CDK4P11802 303 aa12.14□□□□□ -0.47
CHFR-208ENST00000511001 MYF5P13349 255 aa12.14□□□□□ -0.47
CHFR-208ENST00000511001 C6P13671 934 aa12.14□□□□□ -0.47
CHFR-208ENST00000511001 CR2P20023 1033 aa12.14□□□□□ -0.47
CHFR-208ENST00000511001 XPAP23025 273 aaPredicted RBP12.14□□□□□ -0.47
CHFR-208ENST00000511001 MMP12P39900 470 aa12.14□□□□□ -0.47
CHFR-208ENST00000511001 YPEL5P62699 121 aa12.14□□□□□ -0.47
CHFR-208ENST00000511001 LBRQ14739 615 aaKnown RBP12.14□□□□□ -0.47
CHFR-208ENST00000511001 AGERQ15109 404 aa12.14□□□□□ -0.47
CHFR-208ENST00000511001 IRF4Q15306 451 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms