RNA–Protein interactions for RNA: ENST00000510472.1

HMGXB3-203, Transcript of HMG-box containing 3, humanhuman

TSL 2

Gene HMGXB3, Length 580 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-203ENST00000510472 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP11.85□□□□□ -0.51
HMGXB3-203ENST00000510472 GRID2IPA4D2P6 1211 aa11.85□□□□□ -0.51
HMGXB3-203ENST00000510472 H0Y8X5 98 aa11.85□□□□□ -0.51
HMGXB3-203ENST00000510472 KCNK3O14649 394 aa11.85□□□□□ -0.51
HMGXB3-203ENST00000510472 RIOK3O14730 519 aaKnown RBP11.85□□□□□ -0.51
HMGXB3-203ENST00000510472 APOL1O14791 398 aa11.85□□□□□ -0.51
HMGXB3-203ENST00000510472 RAD51BO15315 384 aa11.85□□□□□ -0.51
HMGXB3-203ENST00000510472 SOCS5O75159 536 aa11.85□□□□□ -0.51
HMGXB3-203ENST00000510472 ZRANB2O95218 330 aaKnown RBP eCLIP11.85□□□□□ -0.51
HMGXB3-203ENST00000510472 CER1O95813 267 aa11.85□□□□□ -0.51
HMGXB3-203ENST00000510472 PAK4O96013 591 aaPredicted RBP11.85□□□□□ -0.51
HMGXB3-203ENST00000510472 TNNT1P13805 278 aa11.85□□□□□ -0.51
HMGXB3-203ENST00000510472 CCNB1P14635 433 aa11.85□□□□□ -0.51
HMGXB3-203ENST00000510472 ZFXP17010 805 aaPredicted RBP11.85□□□□□ -0.51
HMGXB3-203ENST00000510472 HNRNPA2B1P22626 353 aaKnown RBP11.85□□□□□ -0.51
HMGXB3-203ENST00000510472 SERPINA4P29622 427 aa11.85□□□□□ -0.51
HMGXB3-203ENST00000510472 BCL2L1Q07817 233 aa11.85□□□□□ -0.51
HMGXB3-203ENST00000510472 STAT4Q14765 748 aa11.85□□□□□ -0.51
HMGXB3-203ENST00000510472 UAP1L1Q3KQV9 507 aa11.85□□□□□ -0.51
HMGXB3-203ENST00000510472 LRRC73Q5JTD7 316 aa11.85□□□□□ -0.51
HMGXB3-203ENST00000510472 ZFYVE27Q5T4F4 411 aa11.85□□□□□ -0.51
HMGXB3-203ENST00000510472 TIGD7Q6NT04 549 aaPredicted RBP11.85□□□□□ -0.51
HMGXB3-203ENST00000510472 SPOCD1Q6ZMY3 1216 aa11.85□□□□□ -0.51
HMGXB3-203ENST00000510472 GCNT7Q6ZNI0 430 aa11.85□□□□□ -0.51
HMGXB3-203ENST00000510472 DAAM2Q86T65 1068 aa11.85□□□□□ -0.51
HMGXB3-203ENST00000510472 CBARPQ8N350 705 aaPredicted RBP11.85□□□□□ -0.51
HMGXB3-203ENST00000510472 CNTD1Q8N815 330 aa11.85□□□□□ -0.51
HMGXB3-203ENST00000510472 EXD1Q8NHP7 514 aa11.85□□□□□ -0.51
HMGXB3-203ENST00000510472 ARRDC2Q8TBH0 407 aa11.85□□□□□ -0.51
HMGXB3-203ENST00000510472 LRRN4Q8WUT4 740 aa11.85□□□□□ -0.51
HMGXB3-203ENST00000510472 NSMCE1Q8WV22 266 aa11.85□□□□□ -0.51
HMGXB3-203ENST00000510472 CENPTQ96BT3 561 aa11.85□□□□□ -0.51
HMGXB3-203ENST00000510472 LGMNQ99538 433 aa11.85□□□□□ -0.51
HMGXB3-203ENST00000510472 IL12RB2Q99665 862 aa11.85□□□□□ -0.51
HMGXB3-203ENST00000510472 DESI2Q9BSY9 194 aa11.85□□□□□ -0.51
HMGXB3-203ENST00000510472 PCDH12Q9NPG4 1184 aa11.85□□□□□ -0.51
HMGXB3-203ENST00000510472 AMACRQ9UHK6 382 aa11.85□□□□□ -0.51
HMGXB3-203ENST00000510472 CA5BQ9Y2D0 317 aa11.85□□□□□ -0.51
HMGXB3-203ENST00000510472 ATP8A1Q9Y2Q0 1164 aa11.85□□□□□ -0.51
HMGXB3-203ENST00000510472 ADGRG1Q9Y653 693 aa11.85□□□□□ -0.51
HMGXB3-203ENST00000510472 CEP192Q8TEP8 1941 aa11.85□□□□□ -0.51
HMGXB3-203ENST00000510472 ASCC3Q8N3C0 2202 aaKnown RBP11.84□□□□□ -0.51
HMGXB3-203ENST00000510472 hCG_1818297A0A087WSY0 165 aa11.84□□□□□ -0.51
HMGXB3-203ENST00000510472 A0A1B0GTQ1 180 aa11.84□□□□□ -0.51
HMGXB3-203ENST00000510472 CFAP69A5D8W1 941 aa11.84□□□□□ -0.51
HMGXB3-203ENST00000510472 PCDHGA12O60330 932 aa11.84□□□□□ -0.51
HMGXB3-203ENST00000510472 FZD6O60353 706 aa11.84□□□□□ -0.51
HMGXB3-203ENST00000510472 DFNA5O60443 496 aa11.84□□□□□ -0.51
HMGXB3-203ENST00000510472 MMP20O60882 483 aa11.84□□□□□ -0.51
HMGXB3-203ENST00000510472 CBFA2T3O75081 653 aa11.84□□□□□ -0.51
HMGXB3-203ENST00000510472 KCNK5O95279 499 aa11.84□□□□□ -0.51
HMGXB3-203ENST00000510472 KRT10P13645 584 aa11.84□□□□□ -0.51
HMGXB3-203ENST00000510472 CEACAM1P13688 526 aa11.84□□□□□ -0.51
HMGXB3-203ENST00000510472 CES1P23141 567 aa11.84□□□□□ -0.51
HMGXB3-203ENST00000510472 CTNNA2P26232 953 aa11.84□□□□□ -0.51
HMGXB3-203ENST00000510472 CTNNA1P35221 906 aaKnown RBP11.84□□□□□ -0.51
HMGXB3-203ENST00000510472 MMP12P39900 470 aa11.84□□□□□ -0.51
HMGXB3-203ENST00000510472 RXRGP48443 463 aa11.84□□□□□ -0.51
HMGXB3-203ENST00000510472 NR2C2P49116 596 aa11.84□□□□□ -0.51
HMGXB3-203ENST00000510472 MAXP61244 160 aa11.84□□□□□ -0.51
HMGXB3-203ENST00000510472 IFI35P80217 286 aaPredicted RBP11.84□□□□□ -0.51
HMGXB3-203ENST00000510472 ELP6Q0PNE2 266 aa11.84□□□□□ -0.51
HMGXB3-203ENST00000510472 RALGDSQ12967 914 aa11.84□□□□□ -0.51
HMGXB3-203ENST00000510472 ZNF235Q14590 738 aa11.84□□□□□ -0.51
HMGXB3-203ENST00000510472 AGERQ15109 404 aa11.84□□□□□ -0.51
HMGXB3-203ENST00000510472 PDK1Q15118 436 aa11.84□□□□□ -0.51
HMGXB3-203ENST00000510472 PPP2R5EQ16537 467 aa11.84□□□□□ -0.51
HMGXB3-203ENST00000510472 TFDP3Q5H9I0 405 aa11.84□□□□□ -0.51
HMGXB3-203ENST00000510472 PRAMEF14Q5SWL7 426 aa11.84□□□□□ -0.51
HMGXB3-203ENST00000510472 NPNTQ6UXI9 565 aa11.84□□□□□ -0.51
HMGXB3-203ENST00000510472 NT5DC3Q86UY8 548 aa11.84□□□□□ -0.51
HMGXB3-203ENST00000510472 CCDC13Q8IYE1 715 aa11.84□□□□□ -0.51
HMGXB3-203ENST00000510472 BBS5Q8N3I7 341 aa11.84□□□□□ -0.51
HMGXB3-203ENST00000510472 KIAA1524Q8TCG1 905 aa11.84□□□□□ -0.51
HMGXB3-203ENST00000510472 ALG3Q92685 438 aa11.84□□□□□ -0.51
HMGXB3-203ENST00000510472 SKA1Q96BD8 255 aa11.84□□□□□ -0.51
HMGXB3-203ENST00000510472 ELF4Q99607 663 aaPredicted RBP11.84□□□□□ -0.51
HMGXB3-203ENST00000510472 MAK16Q9BXY0 300 aaKnown RBP11.84□□□□□ -0.51
HMGXB3-203ENST00000510472 BRD8Q9H0E9 1235 aa11.84□□□□□ -0.51
HMGXB3-203ENST00000510472 NT5MQ9NPB1 228 aa11.84□□□□□ -0.51
HMGXB3-203ENST00000510472 FZD3Q9NPG1 666 aa11.84□□□□□ -0.51
HMGXB3-203ENST00000510472 TM7SF3Q9NS93 570 aa11.84□□□□□ -0.51
HMGXB3-203ENST00000510472 RBM22Q9NW64 420 aaKnown RBP eCLIP11.84□□□□□ -0.51
HMGXB3-203ENST00000510472 SAE1Q9UBE0 346 aaPredicted RBP11.84□□□□□ -0.51
HMGXB3-203ENST00000510472 TRIM10Q9UDY6 481 aa11.84□□□□□ -0.51
HMGXB3-203ENST00000510472 EFR3BQ9Y2G0 817 aa11.84□□□□□ -0.51
HMGXB3-203ENST00000510472 PPIL1Q9Y3C6 166 aa11.84□□□□□ -0.51
HMGXB3-203ENST00000510472 PCDHGC4Q9Y5F7 938 aa11.84□□□□□ -0.51
HMGXB3-203ENST00000510472 HEY1Q9Y5J3 304 aa11.84□□□□□ -0.51
HMGXB3-203ENST00000510472 NYNRINQ9P2P1 1898 aaKnown RBP11.84□□□□□ -0.51
HMGXB3-203ENST00000510472 CABIN1Q9Y6J0 2220 aa11.83□□□□□ -0.52
HMGXB3-203ENST00000510472 A0A1W2PQ67 120 aa11.83□□□□□ -0.52
HMGXB3-203ENST00000510472 CCDC66A2RUB6 948 aa11.83□□□□□ -0.52
HMGXB3-203ENST00000510472 POM121BA6NF01 834 aa11.83□□□□□ -0.52
HMGXB3-203ENST00000510472 KCNK1O00180 336 aa11.83□□□□□ -0.52
HMGXB3-203ENST00000510472 NEMP1O14524 444 aa11.83□□□□□ -0.52
HMGXB3-203ENST00000510472 GIPC1O14908 333 aa11.83□□□□□ -0.52
HMGXB3-203ENST00000510472 CST8O60676 142 aa11.83□□□□□ -0.52
HMGXB3-203ENST00000510472 PGLSO95336 258 aa11.83□□□□□ -0.52
HMGXB3-203ENST00000510472 PRLP01236 227 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms