RNA–Protein interactions for RNA: ENST00000508902.5

CLDND1-220, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 916 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-220ENST00000508902 SAE1Q9UBE0 346 aaPredicted RBP18.34■□□□□ 0.53
CLDND1-220ENST00000508902 BTBD3Q9Y2F9 522 aa18.34■□□□□ 0.53
CLDND1-220ENST00000508902 AKAP13Q12802 2813 aa18.34■□□□□ 0.53
CLDND1-220ENST00000508902 LRP4O75096 1905 aa18.33■□□□□ 0.53
CLDND1-220ENST00000508902 POM121BA6NF01 834 aa18.33■□□□□ 0.52
CLDND1-220ENST00000508902 UPK3BL1B0FP48 263 aa18.33■□□□□ 0.52
CLDND1-220ENST00000508902 UPK3BL2E5RIL1 263 aa18.33■□□□□ 0.52
CLDND1-220ENST00000508902 MATN3O15232 486 aa18.33■□□□□ 0.52
CLDND1-220ENST00000508902 HTRA2O43464 458 aaPredicted RBP18.33■□□□□ 0.52
CLDND1-220ENST00000508902 MMP20O60882 483 aa18.33■□□□□ 0.52
CLDND1-220ENST00000508902 OPHN1O60890 802 aa18.33■□□□□ 0.52
CLDND1-220ENST00000508902 KCNK5O95279 499 aa18.33■□□□□ 0.52
CLDND1-220ENST00000508902 PAK4O96013 591 aaPredicted RBP18.33■□□□□ 0.52
CLDND1-220ENST00000508902 MMP12P39900 470 aa18.33■□□□□ 0.52
CLDND1-220ENST00000508902 DYNLT1P63172 113 aa18.33■□□□□ 0.52
CLDND1-220ENST00000508902 IL9RQ01113 521 aa18.33■□□□□ 0.52
CLDND1-220ENST00000508902 RAD51Q06609 339 aa18.33■□□□□ 0.52
CLDND1-220ENST00000508902 NIPAL4Q0D2K0 466 aa18.33■□□□□ 0.52
CLDND1-220ENST00000508902 ZNF235Q14590 738 aa18.33■□□□□ 0.52
CLDND1-220ENST00000508902 UGP2Q16851 508 aa18.33■□□□□ 0.52
CLDND1-220ENST00000508902 ZFYVE27Q5T4F4 411 aa18.33■□□□□ 0.52
CLDND1-220ENST00000508902 ALG1LQ6GMV1 187 aa18.33■□□□□ 0.52
CLDND1-220ENST00000508902 KIAA1161Q6NSJ0 714 aa18.33■□□□□ 0.52
CLDND1-220ENST00000508902 PSAPL1Q6NUJ1 521 aa18.33■□□□□ 0.52
CLDND1-220ENST00000508902 TTC7BQ86TV6 843 aa18.33■□□□□ 0.52
CLDND1-220ENST00000508902 KATNAL2Q8IYT4 538 aa18.33■□□□□ 0.52
CLDND1-220ENST00000508902 CNTD1Q8N815 330 aa18.33■□□□□ 0.52
CLDND1-220ENST00000508902 OR13H1Q8NG92 308 aa18.33■□□□□ 0.52
CLDND1-220ENST00000508902 ALG3Q92685 438 aa18.33■□□□□ 0.52
CLDND1-220ENST00000508902 FATE1Q969F0 183 aa18.33■□□□□ 0.52
CLDND1-220ENST00000508902 ZNF641Q96N77 438 aaPredicted RBP18.33■□□□□ 0.52
CLDND1-220ENST00000508902 WRAP53Q9BUR4 548 aaKnown RBP18.33■□□□□ 0.52
CLDND1-220ENST00000508902 SLC17A9Q9BYT1 436 aa18.33■□□□□ 0.52
CLDND1-220ENST00000508902 TPX2Q9ULW0 747 aaKnown RBP18.33■□□□□ 0.52
CLDND1-220ENST00000508902 COQ6Q9Y2Z9 468 aa18.33■□□□□ 0.52
CLDND1-220ENST00000508902 PCDHGC4Q9Y5F7 938 aa18.33■□□□□ 0.52
CLDND1-220ENST00000508902 hCG_1818297A0A087WSY0 165 aa18.32■□□□□ 0.52
CLDND1-220ENST00000508902 PRAMEF26H0Y7S4 382 aa18.32■□□□□ 0.52
CLDND1-220ENST00000508902 KCNK1O00180 336 aa18.32■□□□□ 0.52
CLDND1-220ENST00000508902 TLR4O00206 839 aa18.32■□□□□ 0.52
CLDND1-220ENST00000508902 RIOK3O14730 519 aaKnown RBP18.32■□□□□ 0.52
CLDND1-220ENST00000508902 APOL1O14791 398 aa18.32■□□□□ 0.52
CLDND1-220ENST00000508902 TSPAN6O43657 245 aa18.32■□□□□ 0.52
CLDND1-220ENST00000508902 SH3BP5O60239 455 aa18.32■□□□□ 0.52
CLDND1-220ENST00000508902 HNRNPA2B1P22626 353 aaKnown RBP18.32■□□□□ 0.52
CLDND1-220ENST00000508902 IGFALSP35858 605 aa18.32■□□□□ 0.52
CLDND1-220ENST00000508902 ATXN3P54252 364 aaPredicted RBP18.32■□□□□ 0.52
CLDND1-220ENST00000508902 AP1S1P61966 158 aa18.32■□□□□ 0.52
CLDND1-220ENST00000508902 RPS21P63220 83 aaKnown RBP18.32■□□□□ 0.52
CLDND1-220ENST00000508902 DSC2Q02487 901 aa18.32■□□□□ 0.52
CLDND1-220ENST00000508902 PPIDQ08752 370 aaKnown RBP18.32■□□□□ 0.52
CLDND1-220ENST00000508902 TEAD4Q15561 434 aa18.32■□□□□ 0.52
CLDND1-220ENST00000508902 TMEM52BQ4KMG9 183 aa18.32■□□□□ 0.52
CLDND1-220ENST00000508902 MARC1Q5VT66 337 aa18.32■□□□□ 0.52
CLDND1-220ENST00000508902 AADACL2Q6P093 401 aa18.32■□□□□ 0.52
CLDND1-220ENST00000508902 DBX2Q6ZNG2 339 aa18.32■□□□□ 0.52
CLDND1-220ENST00000508902 ABI3BPQ7Z7G0 1075 aa18.32■□□□□ 0.52
CLDND1-220ENST00000508902 DAAM2Q86T65 1068 aa18.32■□□□□ 0.52
CLDND1-220ENST00000508902 RFX6Q8HWS3 928 aa18.32■□□□□ 0.52
CLDND1-220ENST00000508902 MFSD2AQ8NA29 543 aa18.32■□□□□ 0.52
CLDND1-220ENST00000508902 ARRDC2Q8TBH0 407 aa18.32■□□□□ 0.52
CLDND1-220ENST00000508902 SPOCK2Q92563 424 aa18.32■□□□□ 0.52
CLDND1-220ENST00000508902 FUBP1Q96AE4 644 aaKnown RBP18.32■□□□□ 0.52
CLDND1-220ENST00000508902 ATP13A3Q9H7F0 1226 aa18.32■□□□□ 0.52
CLDND1-220ENST00000508902 DDX56Q9NY93 547 aaKnown RBP18.32■□□□□ 0.52
CLDND1-220ENST00000508902 HEY1Q9Y5J3 304 aa18.32■□□□□ 0.52
CLDND1-220ENST00000508902 A0A0U1RQS6 177 aa18.31■□□□□ 0.52
CLDND1-220ENST00000508902 A0A1B0GTQ1 180 aa18.31■□□□□ 0.52
CLDND1-220ENST00000508902 CBFA2T3O75081 653 aa18.31■□□□□ 0.52
CLDND1-220ENST00000508902 CER1O95813 267 aa18.31■□□□□ 0.52
CLDND1-220ENST00000508902 MMP2P08253 660 aa18.31■□□□□ 0.52
CLDND1-220ENST00000508902 CCNCP24863 283 aa18.31■□□□□ 0.52
CLDND1-220ENST00000508902 SERPINA4P29622 427 aa18.31■□□□□ 0.52
CLDND1-220ENST00000508902 CTNNA1P35221 906 aaKnown RBP18.31■□□□□ 0.52
CLDND1-220ENST00000508902 NUDT1P36639 197 aa18.31■□□□□ 0.52
CLDND1-220ENST00000508902 PEX5P50542 639 aa18.31■□□□□ 0.52
CLDND1-220ENST00000508902 BCL2L1Q07817 233 aa18.31■□□□□ 0.52
CLDND1-220ENST00000508902 HNRNPDQ14103 355 aaKnown RBP18.31■□□□□ 0.52
CLDND1-220ENST00000508902 IFI16Q16666 785 aaKnown RBP18.31■□□□□ 0.52
CLDND1-220ENST00000508902 NYAP1Q6ZVC0 841 aa18.31■□□□□ 0.52
CLDND1-220ENST00000508902 KANSL1Q7Z3B3 1105 aa18.31■□□□□ 0.52
CLDND1-220ENST00000508902 ADAT2Q7Z6V5 191 aaKnown RBP18.31■□□□□ 0.52
CLDND1-220ENST00000508902 LRRC49Q8IUZ0 686 aa18.31■□□□□ 0.52
CLDND1-220ENST00000508902 TP53I13Q8NBR0 393 aaPredicted RBP18.31■□□□□ 0.52
CLDND1-220ENST00000508902 BAHD1Q8TBE0 780 aaPredicted RBP18.31■□□□□ 0.52
CLDND1-220ENST00000508902 HCAR2Q8TDS4 363 aa18.31■□□□□ 0.52
CLDND1-220ENST00000508902 FEM1CQ96JP0 617 aa18.31■□□□□ 0.52
CLDND1-220ENST00000508902 IL12RB2Q99665 862 aa18.31■□□□□ 0.52
CLDND1-220ENST00000508902 SEMA3CQ99985 751 aa18.31■□□□□ 0.52
CLDND1-220ENST00000508902 CEP41Q9BYV8 373 aa18.31■□□□□ 0.52
CLDND1-220ENST00000508902 MBNL1Q9NR56 388 aaKnown RBP18.31■□□□□ 0.52
CLDND1-220ENST00000508902 TM7SF3Q9NS93 570 aa18.31■□□□□ 0.52
CLDND1-220ENST00000508902 PNMA8BQ9ULN7 279 aaPredicted RBP18.31■□□□□ 0.52
CLDND1-220ENST00000508902 ATP8A1Q9Y2Q0 1164 aa18.31■□□□□ 0.52
CLDND1-220ENST00000508902 ADGRG1Q9Y653 693 aa18.31■□□□□ 0.52
CLDND1-220ENST00000508902 CAPN6Q9Y6Q1 641 aa18.31■□□□□ 0.52
CLDND1-220ENST00000508902 FRYQ5TBA9 3013 aa18.31■□□□□ 0.52
CLDND1-220ENST00000508902 FZD6O60353 706 aa18.3■□□□□ 0.52
CLDND1-220ENST00000508902 PDHA1P08559 390 aa18.3■□□□□ 0.52
CLDND1-220ENST00000508902 ZNF883P0CG24 379 aa18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms