RNA–Protein interactions for RNA: ENST00000508756.2

CHD1-205, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 724 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-205ENST00000508756 TYW3Q6IPR3 259 aaKnown RBP7.29□□□□□ -1.24
CHD1-205ENST00000508756 PDXDC1Q6P996 788 aa7.29□□□□□ -1.24
CHD1-205ENST00000508756 C11orf65Q8NCR3 313 aa7.29□□□□□ -1.24
CHD1-205ENST00000508756 KIF1BPQ96EK5 621 aa7.29□□□□□ -1.24
CHD1-205ENST00000508756 OR6C3Q9NZP0 311 aa7.29□□□□□ -1.24
CHD1-205ENST00000508756 CCDC189A1A4V9 331 aa7.28□□□□□ -1.24
CHD1-205ENST00000508756 DYTNA2CJ06 578 aa7.28□□□□□ -1.24
CHD1-205ENST00000508756 TSPAN4O14817 238 aa7.28□□□□□ -1.24
CHD1-205ENST00000508756 HEXAP06865 529 aa7.28□□□□□ -1.24
CHD1-205ENST00000508756 PCNAP12004 261 aa7.28□□□□□ -1.24
CHD1-205ENST00000508756 ABCD3P28288 659 aa7.28□□□□□ -1.24
CHD1-205ENST00000508756 C21orf33P30042 268 aaPredicted RBP7.28□□□□□ -1.24
CHD1-205ENST00000508756 PIGAP37287 484 aa7.28□□□□□ -1.24
CHD1-205ENST00000508756 BNC1Q01954 994 aa7.28□□□□□ -1.24
CHD1-205ENST00000508756 PLCB4Q15147 1175 aa7.28□□□□□ -1.24
CHD1-205ENST00000508756 PRICKLE4Q2TBC4 344 aa7.28□□□□□ -1.24
CHD1-205ENST00000508756 SLC9B1Q4ZJI4 515 aa7.28□□□□□ -1.24
CHD1-205ENST00000508756 FAM69AQ5T7M9 428 aa7.28□□□□□ -1.24
CHD1-205ENST00000508756 KIAA1161Q6NSJ0 714 aa7.28□□□□□ -1.24
CHD1-205ENST00000508756 NOXA1Q86UR1 476 aa7.28□□□□□ -1.24
CHD1-205ENST00000508756 CLIP4Q8N3C7 705 aa7.28□□□□□ -1.24
CHD1-205ENST00000508756 TRIB2Q92519 343 aa7.28□□□□□ -1.24
CHD1-205ENST00000508756 ERGIC1Q969X5 290 aa7.28□□□□□ -1.24
CHD1-205ENST00000508756 RRP36Q96EU6 259 aaKnown RBP7.28□□□□□ -1.24
CHD1-205ENST00000508756 MED30Q96HR3 178 aa7.28□□□□□ -1.24
CHD1-205ENST00000508756 TBATAQ96M53 351 aa7.28□□□□□ -1.24
CHD1-205ENST00000508756 AGO1Q9UL18 857 aaKnown RBP7.28□□□□□ -1.24
CHD1-205ENST00000508756 CARD8Q9Y2G2 431 aa7.28□□□□□ -1.24
CHD1-205ENST00000508756 DDX52Q9Y2R4 599 aaKnown RBP eCLIP7.28□□□□□ -1.24
CHD1-205ENST00000508756 CYP46A1Q9Y6A2 500 aa7.28□□□□□ -1.24
CHD1-205ENST00000508756 A6NLC8 198 aa7.27□□□□□ -1.25
CHD1-205ENST00000508756 LDLRAD4O15165 306 aa7.27□□□□□ -1.25
CHD1-205ENST00000508756 KLK8O60259 260 aa7.27□□□□□ -1.25
CHD1-205ENST00000508756 COX7A2P14406 83 aa7.27□□□□□ -1.25
CHD1-205ENST00000508756 RPL3P39023 403 aaKnown RBP7.27□□□□□ -1.25
CHD1-205ENST00000508756 PAFAH1B1P43034 410 aa7.27□□□□□ -1.25
CHD1-205ENST00000508756 PDLIM4P50479 330 aa7.27□□□□□ -1.25
CHD1-205ENST00000508756 GRIK3Q13003 919 aa7.27□□□□□ -1.25
CHD1-205ENST00000508756 RUSC1-AS1Q66K80 236 aa7.27□□□□□ -1.25
CHD1-205ENST00000508756 RRM2BQ7LG56 351 aa7.27□□□□□ -1.25
CHD1-205ENST00000508756 TMED6Q8WW62 240 aa7.27□□□□□ -1.25
CHD1-205ENST00000508756 KLHL15Q96M94 604 aa7.27□□□□□ -1.25
CHD1-205ENST00000508756 BBS4Q96RK4 519 aa7.27□□□□□ -1.25
CHD1-205ENST00000508756 SIN3AQ96ST3 1273 aa7.27□□□□□ -1.25
CHD1-205ENST00000508756 MXRA8Q9BRK3 442 aa7.27□□□□□ -1.25
CHD1-205ENST00000508756 SLC25A33Q9BSK2 321 aa7.27□□□□□ -1.25
CHD1-205ENST00000508756 AGXT2Q9BYV1 514 aa7.27□□□□□ -1.25
CHD1-205ENST00000508756 PAIP1Q9H074 479 aaKnown RBP7.27□□□□□ -1.25
CHD1-205ENST00000508756 SLC25A18Q9H1K4 315 aa7.27□□□□□ -1.25
CHD1-205ENST00000508756 PPP1R14DQ9NXH3 145 aa7.27□□□□□ -1.25
CHD1-205ENST00000508756 ZNF580Q9UK33 172 aa7.27□□□□□ -1.25
CHD1-205ENST00000508756 SLC45A1Q9Y2W3 748 aa7.27□□□□□ -1.25
CHD1-205ENST00000508756 IKBKBO14920 756 aa7.26□□□□□ -1.25
CHD1-205ENST00000508756 KCNJ13O60928 360 aa7.26□□□□□ -1.25
CHD1-205ENST00000508756 SERPINI2O75830 405 aa7.26□□□□□ -1.25
CHD1-205ENST00000508756 F9P00740 461 aa7.26□□□□□ -1.25
CHD1-205ENST00000508756 ITGAXP20702 1163 aa7.26□□□□□ -1.25
CHD1-205ENST00000508756 DHX40Q8IX18 779 aaKnown RBP7.26□□□□□ -1.25
CHD1-205ENST00000508756 AADATQ8N5Z0 425 aa7.26□□□□□ -1.25
CHD1-205ENST00000508756 SNAPC3Q92966 411 aa7.26□□□□□ -1.25
CHD1-205ENST00000508756 VEZTQ9HBM0 779 aa7.26□□□□□ -1.25
CHD1-205ENST00000508756 UBN1Q9NPG3 1134 aa7.26□□□□□ -1.25
CHD1-205ENST00000508756 A0A1B0GVC2 190 aa7.25□□□□□ -1.25
CHD1-205ENST00000508756 PAPSS2O95340 614 aaPredicted RBP7.25□□□□□ -1.25
CHD1-205ENST00000508756 VNN2O95498 520 aa7.25□□□□□ -1.25
CHD1-205ENST00000508756 ZNF12P17014 697 aa7.25□□□□□ -1.25
CHD1-205ENST00000508756 DSCR9P59020 149 aa7.25□□□□□ -1.25
CHD1-205ENST00000508756 CCDC129Q6ZRS4 1044 aa7.25□□□□□ -1.25
CHD1-205ENST00000508756 H1FNTQ75WM6 255 aaPredicted RBP7.25□□□□□ -1.25
CHD1-205ENST00000508756 TDRPQ86YL5 185 aa7.25□□□□□ -1.25
CHD1-205ENST00000508756 TCP11L2Q8N4U5 519 aa7.25□□□□□ -1.25
CHD1-205ENST00000508756 FAM216AQ8WUB2 273 aa7.25□□□□□ -1.25
CHD1-205ENST00000508756 NUDCD2Q8WVJ2 157 aa7.25□□□□□ -1.25
CHD1-205ENST00000508756 OTULINQ96BN8 352 aa7.25□□□□□ -1.25
CHD1-205ENST00000508756 GLIS2Q9BZE0 524 aaPredicted RBP7.25□□□□□ -1.25
CHD1-205ENST00000508756 OCIAD1Q9NX40 245 aa7.25□□□□□ -1.25
CHD1-205ENST00000508756 CISD1Q9NZ45 108 aaKnown RBP7.25□□□□□ -1.25
CHD1-205ENST00000508756 PGAP2Q9UHJ9 254 aa7.25□□□□□ -1.25
CHD1-205ENST00000508756 SARDHQ9UL12 918 aa7.25□□□□□ -1.25
CHD1-205ENST00000508756 TRIP12Q14669 1992 aaPredicted RBP7.25□□□□□ -1.25
CHD1-205ENST00000508756 C4orf47A7E2U8 309 aa7.24□□□□□ -1.25
CHD1-205ENST00000508756 BCAT2O15382 392 aaPredicted RBP7.24□□□□□ -1.25
CHD1-205ENST00000508756 CH25HO95992 272 aa7.24□□□□□ -1.25
CHD1-205ENST00000508756 ITGADQ13349 1161 aa7.24□□□□□ -1.25
CHD1-205ENST00000508756 PPP2R5BQ15173 497 aa7.24□□□□□ -1.25
CHD1-205ENST00000508756 RNPS1Q15287 305 aaKnown RBP7.24□□□□□ -1.25
CHD1-205ENST00000508756 ZNF324BQ6AW86 544 aaPredicted RBP7.24□□□□□ -1.25
CHD1-205ENST00000508756 SHFQ7M4L6 423 aa7.24□□□□□ -1.25
CHD1-205ENST00000508756 IL17REQ8NFR9 667 aa7.24□□□□□ -1.25
CHD1-205ENST00000508756 ZUFSPQ96AP4 578 aa7.24□□□□□ -1.25
CHD1-205ENST00000508756 KLHL29Q96CT2 875 aa7.24□□□□□ -1.25
CHD1-205ENST00000508756 DDX4Q9NQI0 724 aaKnown RBP7.24□□□□□ -1.25
CHD1-205ENST00000508756 SMYD2Q9NRG4 433 aa7.24□□□□□ -1.25
CHD1-205ENST00000508756 KCND2Q9NZV8 630 aa7.24□□□□□ -1.25
CHD1-205ENST00000508756 MPP6Q9NZW5 540 aa7.24□□□□□ -1.25
CHD1-205ENST00000508756 FAM96BQ9Y3D0 163 aa7.24□□□□□ -1.25
CHD1-205ENST00000508756 PAM16Q9Y3D7 125 aa7.24□□□□□ -1.25
CHD1-205ENST00000508756 IGLV5-52A0A0A0MRZ9 124 aa7.23□□□□□ -1.25
CHD1-205ENST00000508756 NPIPB11E5RHQ5 1161 aa7.23□□□□□ -1.25
CHD1-205ENST00000508756 ETFAP13804 333 aa7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms