RNA–Protein interactions for RNA: ENST00000508476.5

UBE2D3-225, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 3

Gene UBE2D3, Length 601 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-225ENST00000508476 TULP2O00295 520 aa4.72□□□□□ -1.65
UBE2D3-225ENST00000508476 HSPA12AO43301 675 aa4.72□□□□□ -1.65
UBE2D3-225ENST00000508476 PLGP00747 810 aaPredicted RBP4.72□□□□□ -1.65
UBE2D3-225ENST00000508476 IGHV4-30-4P0DP06 118 aa4.72□□□□□ -1.65
UBE2D3-225ENST00000508476 PAPOLAP51003 745 aaKnown RBP4.72□□□□□ -1.65
UBE2D3-225ENST00000508476 HDAC4P56524 1084 aa4.72□□□□□ -1.65
UBE2D3-225ENST00000508476 BRWD1-AS2P59051 145 aa4.72□□□□□ -1.65
UBE2D3-225ENST00000508476 SLC12A1Q13621 1099 aa4.72□□□□□ -1.65
UBE2D3-225ENST00000508476 RUNX2Q13950 521 aa4.72□□□□□ -1.65
UBE2D3-225ENST00000508476 ZNF667Q5HYK9 610 aa4.72□□□□□ -1.65
UBE2D3-225ENST00000508476 GFI1BQ5VTD9 330 aa4.72□□□□□ -1.65
UBE2D3-225ENST00000508476 SHFQ7M4L6 423 aa4.72□□□□□ -1.65
UBE2D3-225ENST00000508476 MUC20Q8N307 709 aaPredicted RBP4.72□□□□□ -1.65
UBE2D3-225ENST00000508476 RFLNBQ8N5W9 214 aa4.72□□□□□ -1.65
UBE2D3-225ENST00000508476 PARP16Q8N5Y8 322 aa4.72□□□□□ -1.65
UBE2D3-225ENST00000508476 LSM14AQ8ND56 463 aaKnown RBP4.72□□□□□ -1.65
UBE2D3-225ENST00000508476 GJC3Q8NFK1 279 aa4.72□□□□□ -1.65
UBE2D3-225ENST00000508476 LRFN5Q96NI6 719 aa4.72□□□□□ -1.65
UBE2D3-225ENST00000508476 IL17FQ96PD4 163 aa4.72□□□□□ -1.65
UBE2D3-225ENST00000508476 REEP2Q9BRK0 252 aa4.72□□□□□ -1.65
UBE2D3-225ENST00000508476 SUFUQ9UMX1 484 aa4.72□□□□□ -1.65
UBE2D3-225ENST00000508476 PAM16Q9Y3D7 125 aa4.72□□□□□ -1.65
UBE2D3-225ENST00000508476 COMMD10Q9Y6G5 202 aa4.72□□□□□ -1.65
UBE2D3-225ENST00000508476 ARHGAP10A1A4S6 786 aa4.71□□□□□ -1.66
UBE2D3-225ENST00000508476 PRAC2D3DTV9 90 aa4.71□□□□□ -1.66
UBE2D3-225ENST00000508476 PIP5K1CO60331 668 aa4.71□□□□□ -1.66
UBE2D3-225ENST00000508476 KDM4BO94953 1096 aa4.71□□□□□ -1.66
UBE2D3-225ENST00000508476 UMODP07911 640 aa4.71□□□□□ -1.66
UBE2D3-225ENST00000508476 HMGB1P09429 215 aaKnown RBP4.71□□□□□ -1.66
UBE2D3-225ENST00000508476 PEX5P50542 639 aa4.71□□□□□ -1.66
UBE2D3-225ENST00000508476 CLDN2P57739 230 aa4.71□□□□□ -1.66
UBE2D3-225ENST00000508476 TDGQ13569 410 aa4.71□□□□□ -1.66
UBE2D3-225ENST00000508476 ARHGEF6Q15052 776 aa4.71□□□□□ -1.66
UBE2D3-225ENST00000508476 FBXO47Q5MNV8 452 aa4.71□□□□□ -1.66
UBE2D3-225ENST00000508476 PAPPA-AS1Q5QFB9 102 aa4.71□□□□□ -1.66
UBE2D3-225ENST00000508476 LRRC8EQ6NSJ5 796 aa4.71□□□□□ -1.66
UBE2D3-225ENST00000508476 KLHL24Q6TFL4 600 aa4.71□□□□□ -1.66
UBE2D3-225ENST00000508476 NEK9Q8TD19 979 aa4.71□□□□□ -1.66
UBE2D3-225ENST00000508476 NR4A3Q92570 626 aa4.71□□□□□ -1.66
UBE2D3-225ENST00000508476 SH3KBP1Q96B97 665 aa4.71□□□□□ -1.66
UBE2D3-225ENST00000508476 BICD1Q96G01 975 aa4.71□□□□□ -1.66
UBE2D3-225ENST00000508476 INPP4AQ96PE3 977 aaPredicted RBP4.71□□□□□ -1.66
UBE2D3-225ENST00000508476 EYA3Q99504 573 aa4.71□□□□□ -1.66
UBE2D3-225ENST00000508476 PYM1Q9BRP8 204 aaKnown RBP4.71□□□□□ -1.66
UBE2D3-225ENST00000508476 NUF2Q9BZD4 464 aa4.71□□□□□ -1.66
UBE2D3-225ENST00000508476 TAOK3Q9H2K8 898 aa4.71□□□□□ -1.66
UBE2D3-225ENST00000508476 TTYH1Q9H313 450 aaPredicted RBP4.71□□□□□ -1.66
UBE2D3-225ENST00000508476 ALKBH4Q9NXW9 302 aa4.71□□□□□ -1.66
UBE2D3-225ENST00000508476 SNX9Q9Y5X1 595 aa4.71□□□□□ -1.66
UBE2D3-225ENST00000508476 A0A0U1RQF3 1178 aa4.7□□□□□ -1.66
UBE2D3-225ENST00000508476 CPED1A4D0V7 1026 aa4.7□□□□□ -1.66
UBE2D3-225ENST00000508476 MAGEA13PA6NCF6 341 aa4.7□□□□□ -1.66
UBE2D3-225ENST00000508476 CLGNO14967 610 aa4.7□□□□□ -1.66
UBE2D3-225ENST00000508476 ZIC3O60481 467 aa4.7□□□□□ -1.66
UBE2D3-225ENST00000508476 CLDN14O95500 239 aa4.7□□□□□ -1.66
UBE2D3-225ENST00000508476 PMS2P2O95744 297 aa4.7□□□□□ -1.66
UBE2D3-225ENST00000508476 IGLV2-11P01706 119 aa4.7□□□□□ -1.66
UBE2D3-225ENST00000508476 F7P08709 466 aaPredicted RBP4.7□□□□□ -1.66
UBE2D3-225ENST00000508476 ITGAXP20702 1163 aa4.7□□□□□ -1.66
UBE2D3-225ENST00000508476 BLKP51451 505 aa4.7□□□□□ -1.66
UBE2D3-225ENST00000508476 ZRSR1Q15695 479 aaKnown RBP4.7□□□□□ -1.66
UBE2D3-225ENST00000508476 EFNB3Q15768 340 aa4.7□□□□□ -1.66
UBE2D3-225ENST00000508476 GRAMD1BQ3KR37 738 aa4.7□□□□□ -1.66
UBE2D3-225ENST00000508476 LDHAL6AQ6ZMR3 332 aa4.7□□□□□ -1.66
UBE2D3-225ENST00000508476 TBC1D26Q86UD7 250 aa4.7□□□□□ -1.66
UBE2D3-225ENST00000508476 ZC3HC1Q86WB0 502 aaKnown RBP4.7□□□□□ -1.66
UBE2D3-225ENST00000508476 ZBTB8BQ8NAP8 495 aaPredicted RBP4.7□□□□□ -1.66
UBE2D3-225ENST00000508476 SPATA5Q8NB90 893 aa4.7□□□□□ -1.66
UBE2D3-225ENST00000508476 RUFY2Q8WXA3 655 aa4.7□□□□□ -1.66
UBE2D3-225ENST00000508476 SORCS1Q8WY21 1168 aa4.7□□□□□ -1.66
UBE2D3-225ENST00000508476 NODALQ96S42 347 aa4.7□□□□□ -1.66
UBE2D3-225ENST00000508476 SDF2L1Q9HCN8 221 aa4.7□□□□□ -1.66
UBE2D3-225ENST00000508476 PEMTQ9UBM1 199 aa4.7□□□□□ -1.66
UBE2D3-225ENST00000508476 GPR52Q9Y2T5 361 aa4.7□□□□□ -1.66
UBE2D3-225ENST00000508476 A3GALT2U3KPV4 340 aa4.7□□□□□ -1.66
UBE2D3-225ENST00000508476 DOCK7Q96N67 2140 aa4.69□□□□□ -1.66
UBE2D3-225ENST00000508476 CYSRT1A8MQ03 144 aa4.69□□□□□ -1.66
UBE2D3-225ENST00000508476 LINC01565O15544 149 aa4.69□□□□□ -1.66
UBE2D3-225ENST00000508476 KLK8O60259 260 aa4.69□□□□□ -1.66
UBE2D3-225ENST00000508476 PEX14O75381 377 aa4.69□□□□□ -1.66
UBE2D3-225ENST00000508476 SLC2A4P14672 509 aa4.69□□□□□ -1.66
UBE2D3-225ENST00000508476 ZNF8P17098 575 aaPredicted RBP4.69□□□□□ -1.66
UBE2D3-225ENST00000508476 POU3F1Q03052 451 aaPredicted RBP4.69□□□□□ -1.66
UBE2D3-225ENST00000508476 CHRNDQ07001 517 aa4.69□□□□□ -1.66
UBE2D3-225ENST00000508476 CALCRLQ16602 461 aa4.69□□□□□ -1.66
UBE2D3-225ENST00000508476 MEX3BQ6ZN04 569 aaKnown RBP4.69□□□□□ -1.66
UBE2D3-225ENST00000508476 ADGRG6Q86SQ4 1221 aa4.69□□□□□ -1.66
UBE2D3-225ENST00000508476 NOXA1Q86UR1 476 aa4.69□□□□□ -1.66
UBE2D3-225ENST00000508476 FAM160B2Q86V87 743 aa4.69□□□□□ -1.66
UBE2D3-225ENST00000508476 KIAA2013Q8IYS2 634 aa4.69□□□□□ -1.66
UBE2D3-225ENST00000508476 PLD5Q8N7P1 536 aa4.69□□□□□ -1.66
UBE2D3-225ENST00000508476 USP38Q8NB14 1042 aa4.69□□□□□ -1.66
UBE2D3-225ENST00000508476 POC1AQ8NBT0 407 aa4.69□□□□□ -1.66
UBE2D3-225ENST00000508476 CREB3L4Q8TEY5 395 aa4.69□□□□□ -1.66
UBE2D3-225ENST00000508476 ELP4Q96EB1 424 aa4.69□□□□□ -1.66
UBE2D3-225ENST00000508476 CD180Q99467 661 aa4.69□□□□□ -1.66
UBE2D3-225ENST00000508476 LRRC4Q9HBW1 653 aa4.69□□□□□ -1.66
UBE2D3-225ENST00000508476 TCF7L2Q9NQB0 619 aa4.69□□□□□ -1.66
UBE2D3-225ENST00000508476 SNTG1Q9NSN8 517 aa4.69□□□□□ -1.66
UBE2D3-225ENST00000508476 SLCO3A1Q9UIG8 710 aa4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms